Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc25p10
(918 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-1759|AAF58343.1| 1154|Drosophila melanogaster CG18368-P... 31 1.7
AY928072-1|AAX78396.1| 1319|Drosophila melanogaster hyperpolariz... 30 5.1
AY928069-1|AAX78393.1| 1282|Drosophila melanogaster hyperpolariz... 30 5.1
AE013599-1867|ABC66058.1| 1290|Drosophila melanogaster CG8585-PB... 30 5.1
AE013599-1866|ABC66057.1| 1327|Drosophila melanogaster CG8585-PE... 30 5.1
AF135118-1|AAD31714.1| 3367|Drosophila melanogaster laminin alph... 29 6.8
AE014134-2477|AAF53381.2| 2731|Drosophila melanogaster CG15288-P... 29 6.8
AE014134-2476|AAN10875.1| 3375|Drosophila melanogaster CG15288-P... 29 6.8
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 29 6.8
>AE013599-1759|AAF58343.1| 1154|Drosophila melanogaster CG18368-PA
protein.
Length = 1154
Score = 31.5 bits (68), Expect = 1.7
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = -3
Query: 427 AQPAAREQCAQPAAREQCAQPAAREQCA--QYARLCA 323
A+ R +CA+ +E+CA+ +E+CA ++ LCA
Sbjct: 815 AEEEFRRKCAENELKEKCAEQELKEKCALKEFRELCA 851
>AY928072-1|AAX78396.1| 1319|Drosophila melanogaster
hyperpolarization-activated ionchannel variant
DMIH-A1B2C2 protein.
Length = 1319
Score = 29.9 bits (64), Expect = 5.1
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = -3
Query: 403 CAQPAAREQCAQPAAREQCAQYARLCALLLEHGADSLLTSHVGDNAL 263
C + Q A + C +Y+R + GA SLL SH D L
Sbjct: 142 CGTQSVSSTGGQSALYDACHEYSRSLSAAAAEGAASLLKSHYSDQQL 188
>AY928069-1|AAX78393.1| 1282|Drosophila melanogaster
hyperpolarization-activated ionchannel variant
DMIH-A1B1C1 protein.
Length = 1282
Score = 29.9 bits (64), Expect = 5.1
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = -3
Query: 403 CAQPAAREQCAQPAAREQCAQYARLCALLLEHGADSLLTSHVGDNAL 263
C + Q A + C +Y+R + GA SLL SH D L
Sbjct: 142 CGTQSVSSTGGQSALYDACHEYSRSLSAAAAEGAASLLKSHYSDQQL 188
>AE013599-1867|ABC66058.1| 1290|Drosophila melanogaster CG8585-PB,
isoform B protein.
Length = 1290
Score = 29.9 bits (64), Expect = 5.1
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = -3
Query: 403 CAQPAAREQCAQPAAREQCAQYARLCALLLEHGADSLLTSHVGDNAL 263
C + Q A + C +Y+R + GA SLL SH D L
Sbjct: 142 CGTQSVSSTGGQSALYDACHEYSRSLSAAAAEGAASLLKSHYSDQQL 188
>AE013599-1866|ABC66057.1| 1327|Drosophila melanogaster CG8585-PE,
isoform E protein.
Length = 1327
Score = 29.9 bits (64), Expect = 5.1
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = -3
Query: 403 CAQPAAREQCAQPAAREQCAQYARLCALLLEHGADSLLTSHVGDNAL 263
C + Q A + C +Y+R + GA SLL SH D L
Sbjct: 142 CGTQSVSSTGGQSALYDACHEYSRSLSAAAAEGAASLLKSHYSDQQL 188
>AF135118-1|AAD31714.1| 3367|Drosophila melanogaster laminin alpha1,2
protein.
Length = 3367
Score = 29.5 bits (63), Expect = 6.8
Identities = 22/79 (27%), Positives = 27/79 (34%), Gaps = 1/79 (1%)
Frame = +3
Query: 219 CF*KVTGRRCRKYRRRALSPTCEVSSESAPCSSRRAQSRAYCAHCSRAAGCAHCSRAAGC 398
C VTGRRC K R + T C ++ C+ G C G
Sbjct: 1171 CLANVTGRRCDKCRPGHWNLTAGEGCRDCRCDPHGSRGH----ECNPWTGQCDCKIGVGG 1226
Query: 399 AHCSRAA-GCARSSTSGVQ 452
HC+ G ST G Q
Sbjct: 1227 QHCNECTEGFFGFSTEGCQ 1245
>AE014134-2477|AAF53381.2| 2731|Drosophila melanogaster CG15288-PA,
isoform A protein.
Length = 2731
Score = 29.5 bits (63), Expect = 6.8
Identities = 22/79 (27%), Positives = 27/79 (34%), Gaps = 1/79 (1%)
Frame = +3
Query: 219 CF*KVTGRRCRKYRRRALSPTCEVSSESAPCSSRRAQSRAYCAHCSRAAGCAHCSRAAGC 398
C VTGRRC K R + T C ++ C+ G C G
Sbjct: 1171 CLANVTGRRCDKCRPGHWNLTAGEGCRDCRCDPHGSRGH----ECNPWTGQCDCKIGVGG 1226
Query: 399 AHCSRAA-GCARSSTSGVQ 452
HC+ G ST G Q
Sbjct: 1227 QHCNECTEGFFGFSTEGCQ 1245
>AE014134-2476|AAN10875.1| 3375|Drosophila melanogaster CG15288-PB,
isoform B protein.
Length = 3375
Score = 29.5 bits (63), Expect = 6.8
Identities = 22/79 (27%), Positives = 27/79 (34%), Gaps = 1/79 (1%)
Frame = +3
Query: 219 CF*KVTGRRCRKYRRRALSPTCEVSSESAPCSSRRAQSRAYCAHCSRAAGCAHCSRAAGC 398
C VTGRRC K R + T C ++ C+ G C G
Sbjct: 1171 CLANVTGRRCDKCRPGHWNLTAGEGCRDCRCDPHGSRGH----ECNPWTGQCDCKIGVGG 1226
Query: 399 AHCSRAA-GCARSSTSGVQ 452
HC+ G ST G Q
Sbjct: 1227 QHCNECTEGFFGFSTEGCQ 1245
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 29.5 bits (63), Expect = 6.8
Identities = 21/74 (28%), Positives = 32/74 (43%)
Frame = -3
Query: 451 CTPEVDERAQPAAREQCAQPAAREQCAQPAAREQCAQYARLCALLLEHGADSLLTSHVGD 272
C PE ++ + C + C P A C Q+AR C ++ + + S T + GD
Sbjct: 12657 CKPECIVSSECSLHTACVNRKCVDPC--PGA---CGQFAR-CQVINHNPSCSCNTGYTGD 12710
Query: 271 NALRLYFLHRRPVT 230
R Y R+P T
Sbjct: 12711 PFTRCYQEERKPPT 12724
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,458,816
Number of Sequences: 53049
Number of extensions: 432478
Number of successful extensions: 2008
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1999
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4505424660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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