Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc25o15
         (768 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   2.4  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              23   4.1  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   9.5  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   9.5  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
 Frame = +3

Query: 255 EIKLNELQRLLDQNQTDFESISEFISRDPAFNRNLND-ERFQNLKQQCDEMSSKYSALKT 431
           +IK NE +   D      ++    I +  +   NLN    FQ   Q C E+S  YS+   
Sbjct: 610 DIKQNE-EITFDYMCQSSKNSENSIMQRASMKENLNVYPEFQENVQLCSEISESYSSNNK 668

Query: 432 TKIK 443
           T  K
Sbjct: 669 TLCK 672


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 312 SISEFISRDPAFNRNLNDERFQNLKQQCDEMSSKYSALKTTKI 440
           + +E +SR+ A    LN+     L  +C  +S     LK TKI
Sbjct: 78  NFNEHVSREIA-KIFLNENEINQLITECSAISDTNVHLKITKI 119


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 283 YWIKIRLILSQYQSLFHEIR 342
           YW  + +I+  Y S+  EIR
Sbjct: 213 YWFPLVVIIYTYTSILLEIR 232


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 17/68 (25%), Positives = 29/68 (42%)
 Frame = +3

Query: 156 ELMENVAVISAVSALVQQYEQSEKQNIRLRKDFEIKLNELQRLLDQNQTDFESISEFISR 335
           +L  N  V SAV + +Q   + +       KD   K   +  LL  ++ D+E    +I  
Sbjct: 725 KLDTNRQVNSAVKSTIQSLMKLKSPEW---KDLAKKARSVNHLLTHHEYDYELSRGYIDE 781

Query: 336 DPAFNRNL 359
               N+N+
Sbjct: 782 KILENQNI 789


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,575
Number of Sequences: 438
Number of extensions: 2987
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)