Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc25o06
         (571 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-1652|AAF52785.1|  417|Drosophila melanogaster CG13114-P...    30   1.9  
AE014297-3257|AAF56085.1|  223|Drosophila melanogaster CG13837-P...    29   3.3  
AE014297-2619|AAF55629.2| 1542|Drosophila melanogaster CG6026-PA...    29   4.4  

>AE014134-1652|AAF52785.1|  417|Drosophila melanogaster CG13114-PA
           protein.
          Length = 417

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 18/61 (29%), Positives = 28/61 (45%)
 Frame = +2

Query: 356 YLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGGNVLATPSSSRITIGGLAPYASSHP 535
           Y    E  V+   P  ++P       TT   T  GG+ L+ P++S  + G + P  +S P
Sbjct: 18  YCAECEQEVWEQVPCSEVP-------TTVAPTTTGGSTLSPPTTSATSPGPIYPTTTSAP 70

Query: 536 P 538
           P
Sbjct: 71  P 71


>AE014297-3257|AAF56085.1|  223|Drosophila melanogaster CG13837-PA
           protein.
          Length = 223

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 13  HGRNCAFSRFCRFGHSLLGRCFL 81
           H RNCA+  +C  G  L+ RC L
Sbjct: 164 HPRNCAYFYYCSSGSKLVHRCHL 186


>AE014297-2619|AAF55629.2| 1542|Drosophila melanogaster CG6026-PA
            protein.
          Length = 1542

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 17/66 (25%), Positives = 28/66 (42%)
 Frame = +2

Query: 341  GYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGGNVLATPSSSRITIGGLAPY 520
            GY+    V  E +          P+ + L  TTA  +     V ++ SSS  T    +  
Sbjct: 1403 GYKHVEQVEQEEIAGAKNAGKDQPIALPLMGTTAKPSTSASPVSSSSSSSTSTSSTTSTT 1462

Query: 521  ASSHPP 538
            +++HPP
Sbjct: 1463 STTHPP 1468


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,878,269
Number of Sequences: 53049
Number of extensions: 432844
Number of successful extensions: 1571
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1571
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2234671092
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)