Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc25m20
         (305 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2128|AAF49929.1|   95|Drosophila melanogaster CG10418-P...   138   1e-33
AY070862-1|AAL48484.2|  123|Drosophila melanogaster GM14851p pro...    55   1e-08
BT001620-1|AAN71375.1|  154|Drosophila melanogaster RE35747p pro...    42   1e-04
AE014134-1871|AAF52938.3|  154|Drosophila melanogaster CG17768-P...    42   1e-04
AY058753-1|AAL13982.1| 1170|Drosophila melanogaster SD01586p pro...    27   3.4  
AE013599-3406|AAF46855.2| 1995|Drosophila melanogaster CG4444-PA...    27   3.4  
AB032181-1|BAA86717.1| 1990|Drosophila melanogaster plexus protein.    27   3.4  

>AE014296-2128|AAF49929.1|   95|Drosophila melanogaster CG10418-PA
           protein.
          Length = 95

 Score =  138 bits (334), Expect = 1e-33
 Identities = 65/71 (91%), Positives = 67/71 (94%)
 Frame = +2

Query: 2   ICGTLHSVDQYLNIKLSDISVIDSEKYPHMLSVKNCFIRGSVVRYVQLPADEVDTQLLQD 181
           ICGTLHSVDQYLNIKL+DISV D +KYPHMLSVKNCFIRGSVVRYVQLP DEVDTQLLQD
Sbjct: 25  ICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQLPGDEVDTQLLQD 84

Query: 182 AARKEATVSTR 214
           AARKEA VSTR
Sbjct: 85  AARKEAVVSTR 95


>AY070862-1|AAL48484.2|  123|Drosophila melanogaster GM14851p
           protein.
          Length = 123

 Score = 55.2 bits (127), Expect = 1e-08
 Identities = 30/75 (40%), Positives = 44/75 (58%)
 Frame = +1

Query: 4   MWDVAFCGSISQYKAFGYKRD*L*KVSSYVISEKLFYKRLRGSIRTTAG**GRHPASPGC 183
           MW  A  GS+ +++A GY+     +V  +   ++L +  LRG+IR  AG  G HPA+PGC
Sbjct: 38  MWHPALGGSVPEHQADGYQCHRSGQVPPHAERQELLHPWLRGAIRAAAGRRGGHPAAPGC 97

Query: 184 R*KGGDRFNKIELNL 228
             KGG   +KI + L
Sbjct: 98  GAKGGCCEHKIRIPL 112


>BT001620-1|AAN71375.1|  154|Drosophila melanogaster RE35747p
           protein.
          Length = 154

 Score = 42.3 bits (95), Expect = 1e-04
 Identities = 22/62 (35%), Positives = 36/62 (58%)
 Frame = +2

Query: 8   GTLHSVDQYLNIKLSDISVIDSEKYPHMLSVKNCFIRGSVVRYVQLPADEVDTQLLQDAA 187
           G L S D ++NI L D+ +  S+       +  C+IRGS ++Y+++P DEV   + +DA 
Sbjct: 27  GHLVSCDSWMNINLRDV-ICTSKDGDRFWRMPECYIRGSTIKYLRIP-DEVIDMVKEDAQ 84

Query: 188 RK 193
            K
Sbjct: 85  AK 86


>AE014134-1871|AAF52938.3|  154|Drosophila melanogaster CG17768-PA,
           isoform A protein.
          Length = 154

 Score = 42.3 bits (95), Expect = 1e-04
 Identities = 22/62 (35%), Positives = 36/62 (58%)
 Frame = +2

Query: 8   GTLHSVDQYLNIKLSDISVIDSEKYPHMLSVKNCFIRGSVVRYVQLPADEVDTQLLQDAA 187
           G L S D ++NI L D+ +  S+       +  C+IRGS ++Y+++P DEV   + +DA 
Sbjct: 27  GHLVSCDSWMNINLRDV-ICTSKDGDRFWRMPECYIRGSTIKYLRIP-DEVIDMVKEDAQ 84

Query: 188 RK 193
            K
Sbjct: 85  AK 86


>AY058753-1|AAL13982.1| 1170|Drosophila melanogaster SD01586p
           protein.
          Length = 1170

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 14/56 (25%), Positives = 23/56 (41%)
 Frame = -1

Query: 206 KRSPPF*RHPGEAGCLPHQPAVVRIEPRSLL*NNFSLITYEDTFQSQSRLYPKALY 39
           KRSPP  + P +   L H P    ++P  L  + F     ++     +  +P   Y
Sbjct: 437 KRSPPSPQPPEKIARLSHTPQTASLQPELLARSGFQPYRSDERLMHPAGAFPLEAY 492


>AE013599-3406|AAF46855.2| 1995|Drosophila melanogaster CG4444-PA
            protein.
          Length = 1995

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 14/56 (25%), Positives = 23/56 (41%)
 Frame = -1

Query: 206  KRSPPF*RHPGEAGCLPHQPAVVRIEPRSLL*NNFSLITYEDTFQSQSRLYPKALY 39
            KRSPP  + P +   L H P    ++P  L  + F     ++     +  +P   Y
Sbjct: 1262 KRSPPSPQPPEKIARLSHTPQTASLQPELLARSGFQPYRSDERLMHPAGAFPLEAY 1317


>AB032181-1|BAA86717.1| 1990|Drosophila melanogaster plexus protein.
          Length = 1990

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 14/56 (25%), Positives = 23/56 (41%)
 Frame = -1

Query: 206  KRSPPF*RHPGEAGCLPHQPAVVRIEPRSLL*NNFSLITYEDTFQSQSRLYPKALY 39
            KRSPP  + P +   L H P    ++P  L  + F     ++     +  +P   Y
Sbjct: 1257 KRSPPSPQPPEKIARLSHTPQTASLQPELLARSGFQPYRSDERLMHPAGAFPLEAY 1312


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,286,887
Number of Sequences: 53049
Number of extensions: 211958
Number of successful extensions: 532
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 532
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 568694034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)