Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc25m13
         (455 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ782382-1|ABG91087.1| 1066|Drosophila melanogaster microtubule ...    29   2.2  
DQ782381-1|ABG91086.1| 1066|Drosophila melanogaster microtubule ...    29   2.2  
U01842-1|AAA03718.1| 1066|Drosophila melanogaster kinesin-like p...    28   5.2  
AY069442-1|AAL39587.1| 1066|Drosophila melanogaster LD15641p pro...    28   5.2  
AE014296-198|AAF47458.2| 1066|Drosophila melanogaster CG9191-PA ...    28   5.2  

>DQ782382-1|ABG91087.1| 1066|Drosophila melanogaster microtubule
           dependent motor proteinprotein.
          Length = 1066

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 12/43 (27%), Positives = 28/43 (65%)
 Frame = +3

Query: 159 QVLAIKQKNKMEITTNSEYSAEKNSIKENFLLDMIKEVCSEQI 287
           Q  A+K++   E+  NS Y +++ ++  +  ++M+KEVC++ +
Sbjct: 559 QQAALKEQLSQEMV-NSSYVSQRLALNSSKSIEMLKEVCAQSL 600


>DQ782381-1|ABG91086.1| 1066|Drosophila melanogaster microtubule
           dependent motor proteinprotein.
          Length = 1066

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 12/43 (27%), Positives = 28/43 (65%)
 Frame = +3

Query: 159 QVLAIKQKNKMEITTNSEYSAEKNSIKENFLLDMIKEVCSEQI 287
           Q  A+K++   E+  NS Y +++ ++  +  ++M+KEVC++ +
Sbjct: 559 QQAALKEQLSQEMV-NSSYVSQRLALNSSKSIEMLKEVCAQSL 600


>U01842-1|AAA03718.1| 1066|Drosophila melanogaster kinesin-like
           protein protein.
          Length = 1066

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 11/43 (25%), Positives = 28/43 (65%)
 Frame = +3

Query: 159 QVLAIKQKNKMEITTNSEYSAEKNSIKENFLLDMIKEVCSEQI 287
           Q  A+K++   E+  NS Y +++ ++  +  ++M+KE+C++ +
Sbjct: 559 QQAALKEQLSQEMV-NSSYVSQRLALNSSKSIEMLKEMCAQSL 600


>AY069442-1|AAL39587.1| 1066|Drosophila melanogaster LD15641p
           protein.
          Length = 1066

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 11/43 (25%), Positives = 28/43 (65%)
 Frame = +3

Query: 159 QVLAIKQKNKMEITTNSEYSAEKNSIKENFLLDMIKEVCSEQI 287
           Q  A+K++   E+  NS Y +++ ++  +  ++M+KE+C++ +
Sbjct: 559 QQAALKEQLSQEMV-NSSYVSQRLALNSSKSIEMLKEMCAQSL 600


>AE014296-198|AAF47458.2| 1066|Drosophila melanogaster CG9191-PA
           protein.
          Length = 1066

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 11/43 (25%), Positives = 28/43 (65%)
 Frame = +3

Query: 159 QVLAIKQKNKMEITTNSEYSAEKNSIKENFLLDMIKEVCSEQI 287
           Q  A+K++   E+  NS Y +++ ++  +  ++M+KE+C++ +
Sbjct: 559 QQAALKEQLSQEMV-NSSYVSQRLALNSSKSIEMLKEMCAQSL 600


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,501,912
Number of Sequences: 53049
Number of extensions: 244743
Number of successful extensions: 364
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 364
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1497419784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)