Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc25m11
         (638 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U90651-1|AAD08714.1|  441|Homo sapiens embryonic ectoderm develo...   105   2e-22
BC068995-1|AAH68995.1|  466|Homo sapiens EED protein protein.         105   2e-22
BC047672-1|AAH47672.1|  427|Homo sapiens EED protein protein.         105   2e-22
AF099032-1|AAD08815.1|  400|Homo sapiens embryonic ectoderm deve...   105   2e-22
AF080227-1|AAC95144.1|  441|Homo sapiens embryonic ectoderm deve...   105   2e-22
AF078933-1|AAC68675.1|  427|Homo sapiens WAIT-1 protein.              105   2e-22
AF070418-1|AAC23685.1|  517|Homo sapiens embryonic ectoderm deve...   105   2e-22

>U90651-1|AAD08714.1|  441|Homo sapiens embryonic ectoderm
           development protein homolog protein.
          Length = 441

 Score =  105 bits (251), Expect = 2e-22
 Identities = 46/73 (63%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
 Frame = +3

Query: 426 FNC--SAKEDHGQPLFGCQFNHHLGEGEPSVFAVVGSNRVSIYECPESGGFKFLQCYADP 599
           F C  S KEDH QPLFG QFN H  EG+P VFA VGSNRV++YEC   G  + LQ Y D 
Sbjct: 82  FKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDA 141

Query: 600 DVDETFYTCAWSY 638
           D DE FYTCAW+Y
Sbjct: 142 DADENFYTCAWTY 154


>BC068995-1|AAH68995.1|  466|Homo sapiens EED protein protein.
          Length = 466

 Score =  105 bits (251), Expect = 2e-22
 Identities = 46/73 (63%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
 Frame = +3

Query: 426 FNC--SAKEDHGQPLFGCQFNHHLGEGEPSVFAVVGSNRVSIYECPESGGFKFLQCYADP 599
           F C  S KEDH QPLFG QFN H  EG+P VFA VGSNRV++YEC   G  + LQ Y D 
Sbjct: 82  FKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDA 141

Query: 600 DVDETFYTCAWSY 638
           D DE FYTCAW+Y
Sbjct: 142 DADENFYTCAWTY 154


>BC047672-1|AAH47672.1|  427|Homo sapiens EED protein protein.
          Length = 427

 Score =  105 bits (251), Expect = 2e-22
 Identities = 46/73 (63%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
 Frame = +3

Query: 426 FNC--SAKEDHGQPLFGCQFNHHLGEGEPSVFAVVGSNRVSIYECPESGGFKFLQCYADP 599
           F C  S KEDH QPLFG QFN H  EG+P VFA VGSNRV++YEC   G  + LQ Y D 
Sbjct: 68  FKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDA 127

Query: 600 DVDETFYTCAWSY 638
           D DE FYTCAW+Y
Sbjct: 128 DADENFYTCAWTY 140


>AF099032-1|AAD08815.1|  400|Homo sapiens embryonic ectoderm
           development protein short isoform protein.
          Length = 400

 Score =  105 bits (251), Expect = 2e-22
 Identities = 46/73 (63%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
 Frame = +3

Query: 426 FNC--SAKEDHGQPLFGCQFNHHLGEGEPSVFAVVGSNRVSIYECPESGGFKFLQCYADP 599
           F C  S KEDH QPLFG QFN H  EG+P VFA VGSNRV++YEC   G  + LQ Y D 
Sbjct: 82  FKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDA 141

Query: 600 DVDETFYTCAWSY 638
           D DE FYTCAW+Y
Sbjct: 142 DADENFYTCAWTY 154


>AF080227-1|AAC95144.1|  441|Homo sapiens embryonic ectoderm
           development protein protein.
          Length = 441

 Score =  105 bits (251), Expect = 2e-22
 Identities = 46/73 (63%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
 Frame = +3

Query: 426 FNC--SAKEDHGQPLFGCQFNHHLGEGEPSVFAVVGSNRVSIYECPESGGFKFLQCYADP 599
           F C  S KEDH QPLFG QFN H  EG+P VFA VGSNRV++YEC   G  + LQ Y D 
Sbjct: 82  FKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDA 141

Query: 600 DVDETFYTCAWSY 638
           D DE FYTCAW+Y
Sbjct: 142 DADENFYTCAWTY 154


>AF078933-1|AAC68675.1|  427|Homo sapiens WAIT-1 protein.
          Length = 427

 Score =  105 bits (251), Expect = 2e-22
 Identities = 46/73 (63%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
 Frame = +3

Query: 426 FNC--SAKEDHGQPLFGCQFNHHLGEGEPSVFAVVGSNRVSIYECPESGGFKFLQCYADP 599
           F C  S KEDH QPLFG QFN H  EG+P VFA VGSNRV++YEC   G  + LQ Y D 
Sbjct: 68  FKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDA 127

Query: 600 DVDETFYTCAWSY 638
           D DE FYTCAW+Y
Sbjct: 128 DADENFYTCAWTY 140


>AF070418-1|AAC23685.1|  517|Homo sapiens embryonic ectoderm
           development protein protein.
          Length = 517

 Score =  105 bits (251), Expect = 2e-22
 Identities = 46/73 (63%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
 Frame = +3

Query: 426 FNC--SAKEDHGQPLFGCQFNHHLGEGEPSVFAVVGSNRVSIYECPESGGFKFLQCYADP 599
           F C  S KEDH QPLFG QFN H  EG+P VFA VGSNRV++YEC   G  + LQ Y D 
Sbjct: 158 FKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDA 217

Query: 600 DVDETFYTCAWSY 638
           D DE FYTCAW+Y
Sbjct: 218 DADENFYTCAWTY 230


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,367,942
Number of Sequences: 237096
Number of extensions: 1549390
Number of successful extensions: 2420
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2420
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)