Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc25m11
         (638 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    24   1.4  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    24   1.4  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   1.9  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   2.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   2.5  
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    21   7.6  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/32 (31%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -3

Query: 618 KMFHQHQDLHSTARI*SLQ-IQGTHILRLCYY 526
           ++++ H   +S++ I  L  I+GTH +++ YY
Sbjct: 269 QLYYPHVPEYSSSIIMELHNIEGTHYVKIVYY 300


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/32 (31%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -3

Query: 618 KMFHQHQDLHSTARI*SLQ-IQGTHILRLCYY 526
           ++++ H   +S++ I  L  I+GTH +++ YY
Sbjct: 284 QLYYPHVPEYSSSIIMELHNIEGTHYVKIVYY 315


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 85  IKEV*KYFQNLKI*NNRNKTW 23
           +K   +YF NL + NNR   W
Sbjct: 405 VKGFEEYFLNLTVENNRRNPW 425


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/40 (25%), Positives = 18/40 (45%)
 Frame = -3

Query: 378 DVFSLLSW*ESHYGTYCLCLKYYQHLKCHQLHFQKNSCLF 259
           ++FS      + Y  Y   + YY   K HQ  + K+  ++
Sbjct: 407 EIFSTSMKDPAFYRIYKRIIDYYHSYKMHQKPYNKDEIIY 446


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/40 (25%), Positives = 18/40 (45%)
 Frame = -3

Query: 378 DVFSLLSW*ESHYGTYCLCLKYYQHLKCHQLHFQKNSCLF 259
           ++FS      + Y  Y   + YY   K HQ  + K+  ++
Sbjct: 407 EIFSTSMKDPAFYRIYKRIIDYYHSYKMHQKPYNKDEIIY 446


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 324 CLKYYQHLKCH 292
           C K YQ+++CH
Sbjct: 122 CQKTYQYVQCH 132


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,062
Number of Sequences: 438
Number of extensions: 3060
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)