Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc25m02
         (633 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052008-1|AAK93432.1|  389|Drosophila melanogaster LD47143p pro...    82   5e-16
AF145308-1|AAF08389.1|  389|Drosophila melanogaster 26S proteaso...    82   5e-16
AE014297-3158|AAF56000.1|  389|Drosophila melanogaster CG5378-PA...    82   5e-16
AE014298-1544|AAF47993.1|  160|Drosophila melanogaster CG2081-PB...    28   9.1  
AE014297-1413|AAF54724.2|  573|Drosophila melanogaster CG12213-P...    28   9.1  
AE014297-1412|AAN13537.1|  506|Drosophila melanogaster CG12213-P...    28   9.1  

>AY052008-1|AAK93432.1|  389|Drosophila melanogaster LD47143p
           protein.
          Length = 389

 Score = 82.2 bits (194), Expect = 5e-16
 Identities = 50/160 (31%), Positives = 86/160 (53%), Gaps = 10/160 (6%)
 Frame = +2

Query: 182 KTPEYMALAGIKFKLSLPEFKDNIQLKEQLLNGIKAGHMAPYYKEVCNDLGWAFDQKLYD 361
           K P  + LA  KF L+L E+K +  LK +LL  I+  +MAP+Y+ +C++LGW  D+ L  
Sbjct: 13  KNPN-LELAQTKFLLTLAEYKQDAALKAKLLEAIRTENMAPWYEHICSELGWTVDKDLLA 71

Query: 362 DMTKENQDRLSKFEE--DDSETPVWQ--------DRLDYLCSVGDKETATALATSKYEDS 511
            M + N+  + + +   +D+E  + +         + +YLC +GDK  A       YE  
Sbjct: 72  RMKENNRVEVEQLDAAIEDAEKNLGEMEVREANLKKSEYLCRIGDKAAAETAFRKTYE-K 130

Query: 512 TLTTNRRLDAIFALFRIAYFHGCNVKEMGKAINKAHELVD 631
           T++   RLD +F L R+  F+  +   + + I+KA  L++
Sbjct: 131 TVSLGHRLDIVFHLIRLGLFY-LDHDLITRNIDKAKYLIE 169


>AF145308-1|AAF08389.1|  389|Drosophila melanogaster 26S proteasome
           regulatory complexsubunit p42A protein.
          Length = 389

 Score = 82.2 bits (194), Expect = 5e-16
 Identities = 50/160 (31%), Positives = 86/160 (53%), Gaps = 10/160 (6%)
 Frame = +2

Query: 182 KTPEYMALAGIKFKLSLPEFKDNIQLKEQLLNGIKAGHMAPYYKEVCNDLGWAFDQKLYD 361
           K P  + LA  KF L+L E+K +  LK +LL  I+  +MAP+Y+ +C++LGW  D+ L  
Sbjct: 13  KNPN-LELAQTKFLLTLAEYKQDAALKAKLLEAIRTENMAPWYEHICSELGWTVDKDLLA 71

Query: 362 DMTKENQDRLSKFEE--DDSETPVWQ--------DRLDYLCSVGDKETATALATSKYEDS 511
            M + N+  + + +   +D+E  + +         + +YLC +GDK  A       YE  
Sbjct: 72  RMKENNRVEVEQLDAAIEDAEKNLGEMEVREANLKKSEYLCRIGDKAAAETAFRKTYE-K 130

Query: 512 TLTTNRRLDAIFALFRIAYFHGCNVKEMGKAINKAHELVD 631
           T++   RLD +F L R+  F+  +   + + I+KA  L++
Sbjct: 131 TVSLGHRLDIVFHLIRLGLFY-LDHDLITRNIDKAKYLIE 169


>AE014297-3158|AAF56000.1|  389|Drosophila melanogaster CG5378-PA
           protein.
          Length = 389

 Score = 82.2 bits (194), Expect = 5e-16
 Identities = 50/160 (31%), Positives = 86/160 (53%), Gaps = 10/160 (6%)
 Frame = +2

Query: 182 KTPEYMALAGIKFKLSLPEFKDNIQLKEQLLNGIKAGHMAPYYKEVCNDLGWAFDQKLYD 361
           K P  + LA  KF L+L E+K +  LK +LL  I+  +MAP+Y+ +C++LGW  D+ L  
Sbjct: 13  KNPN-LELAQTKFLLTLAEYKQDAALKAKLLEAIRTENMAPWYEHICSELGWTVDKDLLA 71

Query: 362 DMTKENQDRLSKFEE--DDSETPVWQ--------DRLDYLCSVGDKETATALATSKYEDS 511
            M + N+  + + +   +D+E  + +         + +YLC +GDK  A       YE  
Sbjct: 72  RMKENNRVEVEQLDAAIEDAEKNLGEMEVREANLKKSEYLCRIGDKAAAETAFRKTYE-K 130

Query: 512 TLTTNRRLDAIFALFRIAYFHGCNVKEMGKAINKAHELVD 631
           T++   RLD +F L R+  F+  +   + + I+KA  L++
Sbjct: 131 TVSLGHRLDIVFHLIRLGLFY-LDHDLITRNIDKAKYLIE 169


>AE014298-1544|AAF47993.1|  160|Drosophila melanogaster CG2081-PB,
           isoform B protein.
          Length = 160

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = -2

Query: 467 CLQLNTSNQAYLAKRVFQSRLLQI*IACLDFLLSCHHTTSGQRPSQGHCTPLYNKEP 297
           C+   T  Q Y+ + VF      + I CL+ L     +    + +QG+CTP+ +  P
Sbjct: 38  CMDTLTGRQLYIGE-VFTREDQCVRIQCLETLQLWEDSCQVPKLTQGNCTPVPSTNP 93


>AE014297-1413|AAF54724.2|  573|Drosophila melanogaster CG12213-PA,
           isoform A protein.
          Length = 573

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = +2

Query: 338 AFDQKLYDDMTKENQDRLSKFEEDDSETPVWQDRLDYLCSVGDKETATALAT 493
           AFDQKL   +   ++D+ SK    + E   W+++LD L   G+ +     AT
Sbjct: 136 AFDQKLQKVLADLHKDKASK----EREVAAWKEKLDKLQRDGEHKIHALEAT 183


>AE014297-1412|AAN13537.1|  506|Drosophila melanogaster CG12213-PB,
           isoform B protein.
          Length = 506

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = +2

Query: 338 AFDQKLYDDMTKENQDRLSKFEEDDSETPVWQDRLDYLCSVGDKETATALAT 493
           AFDQKL   +   ++D+ SK    + E   W+++LD L   G+ +     AT
Sbjct: 136 AFDQKLQKVLADLHKDKASK----EREVAAWKEKLDKLQRDGEHKIHALEAT 183


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,973,840
Number of Sequences: 53049
Number of extensions: 472149
Number of successful extensions: 1544
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1541
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)