Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc25l11
(471 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0319 - 16712572-16712654,16712756-16712797,16713955-167142... 218 2e-57
03_01_0276 + 2124538-2124550,2124678-2124962,2126813-2126854,212... 218 2e-57
02_05_1201 + 34929577-34929589,34930252-34930587,34931378-349314... 218 2e-57
12_02_1115 - 26173351-26173725,26174241-26174344,26174812-26174845 64 7e-11
02_02_0500 - 10993675-10994067,10994434-10995738 31 0.62
05_01_0029 + 187769-188707,188971-189246,189978-190174,190263-19... 29 1.9
03_05_0291 - 22837412-22838128 29 1.9
11_06_0538 + 24759030-24759379,24759380-24759488,24759604-247596... 28 3.3
04_04_0069 + 22506885-22508354 28 3.3
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 28 3.3
05_07_0365 - 29662703-29662710,29664321-29664378,29664675-296647... 28 4.4
12_02_1007 - 25248653-25249078,25249956-25250021,25250108-252502... 27 5.8
06_03_0458 - 20995834-20996004,20996404-20997309,20997778-209979... 27 5.8
05_05_0162 + 22838907-22839070,22839180-22840063,22841164-22841228 27 5.8
02_04_0663 + 24820745-24821065,24821415-24821861,24821949-248223... 27 5.8
12_02_0035 - 12563503-12564405,12564494-12565611,12565709-125662... 27 7.6
11_04_0068 - 13116037-13116414,13116501-13116947,13117026-131177... 27 7.6
10_08_0356 + 17141107-17141165,17141502-17141650,17141748-171419... 27 7.6
06_01_0944 + 7264833-7265120,7265511-7265600,7265702-7265798,726... 27 7.6
03_03_0140 + 14771293-14771821,14772343-14772455,14772723-147728... 27 7.6
02_05_0373 + 28374298-28374380,28375126-28375303,28375975-283760... 27 7.6
01_06_1575 + 38339970-38340786,38340884-38342001,38342099-38343055 27 7.6
01_06_0680 + 31132683-31133499,31133597-31134717,31134811-31135713 27 7.6
>10_08_0319 -
16712572-16712654,16712756-16712797,16713955-16714239,
16714346-16714358
Length = 140
Score = 218 bits (533), Expect = 2e-57
Identities = 98/127 (77%), Positives = 116/127 (91%)
Frame = +3
Query: 69 KFRISLGLPVGAVINCADNTGAKNLYVIAVQGIXGRLNRLPAAGSGDMIVATVTKGKPEL 248
KFR+SLGLPV A +NCADNTGAKNLY+I+V+GI GRLNRLP+A GDM++ATV KGKP+L
Sbjct: 13 KFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL 72
Query: 249 RKKVMPAVVIRQRKPFXRRDGVFIYFEDNAGVIVNNKGEMXGSAITGPVAKECADLWPRI 428
RKKVMPAV++RQRKP+ R+DGV++YFEDNAGVIVN KGEM GSAITGP+ KECADLWPRI
Sbjct: 73 RKKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRI 132
Query: 429 ASXASSI 449
AS A++I
Sbjct: 133 ASAANAI 139
>03_01_0276 +
2124538-2124550,2124678-2124962,2126813-2126854,
2126943-2127025
Length = 140
Score = 218 bits (533), Expect = 2e-57
Identities = 98/127 (77%), Positives = 116/127 (91%)
Frame = +3
Query: 69 KFRISLGLPVGAVINCADNTGAKNLYVIAVQGIXGRLNRLPAAGSGDMIVATVTKGKPEL 248
KFR+SLGLPV A +NCADNTGAKNLY+I+V+GI GRLNRLP+A GDM++ATV KGKP+L
Sbjct: 13 KFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL 72
Query: 249 RKKVMPAVVIRQRKPFXRRDGVFIYFEDNAGVIVNNKGEMXGSAITGPVAKECADLWPRI 428
RKKVMPAV++RQRKP+ R+DGV++YFEDNAGVIVN KGEM GSAITGP+ KECADLWPRI
Sbjct: 73 RKKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRI 132
Query: 429 ASXASSI 449
AS A++I
Sbjct: 133 ASAANAI 139
>02_05_1201 +
34929577-34929589,34930252-34930587,34931378-34931419,
34931630-34931712
Length = 157
Score = 218 bits (533), Expect = 2e-57
Identities = 98/127 (77%), Positives = 116/127 (91%)
Frame = +3
Query: 69 KFRISLGLPVGAVINCADNTGAKNLYVIAVQGIXGRLNRLPAAGSGDMIVATVTKGKPEL 248
KFR+SLGLPV A +NCADNTGAKNLY+I+V+GI GRLNRLP+A GDM++ATV KGKP+L
Sbjct: 30 KFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL 89
Query: 249 RKKVMPAVVIRQRKPFXRRDGVFIYFEDNAGVIVNNKGEMXGSAITGPVAKECADLWPRI 428
RKKVMPAV++RQRKP+ R+DGV++YFEDNAGVIVN KGEM GSAITGP+ KECADLWPRI
Sbjct: 90 RKKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRI 149
Query: 429 ASXASSI 449
AS A++I
Sbjct: 150 ASAANAI 156
>12_02_1115 - 26173351-26173725,26174241-26174344,26174812-26174845
Length = 170
Score = 63.7 bits (148), Expect = 7e-11
Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Frame = +3
Query: 108 INCADNTGAKNLYVIAVQGIXGRLNRLPAAGSGDMIVATVTKGKPELRKK---VMPAVVI 278
+ DN+GAK V+ +Q + G+ A GD I+ +V + +P + K V+ VV+
Sbjct: 58 LKVVDNSGAKR--VMCIQSLRGK----KGARLGDTIIGSVKEAQPRGKVKKGDVVYGVVV 111
Query: 279 RQRKPFXRRDGVFIYFEDNAGVIVNNKGEMXGSAITGPVAKE 404
R R DG I F+DNA V+VNNKGE+ G+ + GPV E
Sbjct: 112 RAAMKRGRNDGSEIQFDDNAIVLVNNKGELIGTRVFGPVPHE 153
>02_02_0500 - 10993675-10994067,10994434-10995738
Length = 565
Score = 30.7 bits (66), Expect = 0.62
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = -3
Query: 388 PVMAEPFISPLLLTMTPALSSKYINTPSRLXNGFRCLMTT---AGITFFR-SSGLPFVTV 221
P EP I+ + ++PA+ +T S + NG+ +M+T G+ F + SSG V V
Sbjct: 225 PAPVEPIIANGKVKLSPAVMEMIYSTISGIENGYLPVMSTEGSGGVYFMKDSSGESNVAV 284
Query: 220 ATIMSPEPAA 191
+ EP A
Sbjct: 285 FKPIDEEPMA 294
>05_01_0029 +
187769-188707,188971-189246,189978-190174,190263-190404,
190584-190862,190941-191013,191331-191379,192169-192433,
192576-192631,192777-192845,193028-193139,193682-193771,
193955-194125,194449-194506,194970-195128,195379-195401
Length = 985
Score = 29.1 bits (62), Expect = 1.9
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +3
Query: 288 KPFXRRDGVFIYFEDNAGVIVNNKGEMXGSAITGPVAKEC-ADLWPRIASXASSIX*IY 461
KP D V + DN GV+V+ G GS+ +C A+++P + S +Y
Sbjct: 214 KPLSGGDEVMLLV-DNVGVVVDRSGHPVGSSFVFNTTPDCIAEVYPYVVVAGDSKVDVY 271
>03_05_0291 - 22837412-22838128
Length = 238
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = -3
Query: 433 EAIRGHKSAHSLATGPVMAEPFI--SPLLLTMTPALSS 326
+A+ GHK++H T P MA + P T +PA SS
Sbjct: 102 QALGGHKTSHRPRTPPTMAAVVVVDEPAATTASPAASS 139
>11_06_0538 +
24759030-24759379,24759380-24759488,24759604-24759692,
24760179-24760287,24760370-24760471,24760564-24760628,
24760830-24760936,24761023-24761087,24761163-24761217,
24761305-24761465
Length = 403
Score = 28.3 bits (60), Expect = 3.3
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = -3
Query: 355 LLTMTPALSSKY-INTPSRLXNGFRCLMTT--AGITFFRSSGLPFVTVATIMSPEPAAGS 185
LLT P + + SRL R L AG+ FF S+ + + I+ P P++
Sbjct: 37 LLTQRPCVEGTMTMGEQSRLPESLRLLDAAFDAGVNFFDSAEMYYYAPLLILPPPPSSFP 96
Query: 184 LFR 176
LF+
Sbjct: 97 LFQ 99
>04_04_0069 + 22506885-22508354
Length = 489
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 5/58 (8%)
Frame = +2
Query: 47 TWWFRGSEIPYLPGSPSGSSNQLR-----RQHRGKESVCDRCPRYXRSPEQTAGGRFW 205
+WWF+ + + + G S + R+ RG + RCP+ S G R W
Sbjct: 177 SWWFKAAGMAMVAGMASAEGAKAAVLVPARRWRGAQRRRRRCPQIRASRLDLEGSRLW 234
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 133 APVLSAQLITAPTGRPREIRNFAPAEPPRP 44
AP S+ L TAP P + + FAP PP P
Sbjct: 328 APNASSSLFTAPV--PADRQQFAPPPPPSP 355
>05_07_0365 -
29662703-29662710,29664321-29664378,29664675-29664732,
29665029-29665086,29665737-29665794,29666091-29666134,
29666445-29666502,29666799-29666981,29667154-29667211,
29667508-29667565,29667862-29667919,29668216-29668259,
29668570-29668627,29668924-29669106,29669279-29669336,
29669633-29669676,29669987-29670044,29670341-29670398,
29670696-29670753,29671050-29671052
Length = 420
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -3
Query: 88 PREIRNFA-PAEPPRPLLDILLYQNFERNN 2
P +IR FA P P+L IL Y F RNN
Sbjct: 383 PSDIRCFAEPTAASWPMLWILRYSTFRRNN 412
>12_02_1007 -
25248653-25249078,25249956-25250021,25250108-25250260,
25250961-25251336,25252001-25252143
Length = 387
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -3
Query: 238 LPFVTVATIMSPEPAAGSLFRRPXIPWTAITYR 140
LP+ ++ P PAA +L+ RP P + R
Sbjct: 333 LPYPPYPAVLLPPPAAATLYGRPPAPAPGVAAR 365
>06_03_0458 -
20995834-20996004,20996404-20997309,20997778-20997942,
20998024-20998353,20998471-20998527,20998579-20998692,
20999220-20999381,20999465-20999527,21001100-21001207,
21001598-21001675,21001771-21001902
Length = 761
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +3
Query: 327 EDNAGVIV--NNKGEMXGSAITGPVAKECAD 413
ED +I+ N+KG GS ITG + + CA+
Sbjct: 715 EDGDKIIMSSNDKGSNQGSFITGKIVESCAE 745
>05_05_0162 + 22838907-22839070,22839180-22840063,22841164-22841228
Length = 370
Score = 27.5 bits (58), Expect = 5.8
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Frame = -3
Query: 244 SGLPFVTVATIMSPEPAAGSLFRRPXIPWTAITYRFFAPVLSAQLITAPTGR--PREIRN 71
S LPF I P A G + W A+++ FA +++ PTG P E
Sbjct: 150 SSLPFGRSTIIDHPPVAFGGRMWWIDLGWGAVSFDPFADEPDFRIVALPTGSVLPAEASG 209
Query: 70 FA 65
FA
Sbjct: 210 FA 211
>02_04_0663 +
24820745-24821065,24821415-24821861,24821949-24822317,
24822324-24822835,24822914-24823084,24823284-24823434,
24823664-24823702
Length = 669
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3
Query: 124 LSAQLITAPTGRPREIRNFAPAEPP 50
++A+ TAP GRP + FAP+ PP
Sbjct: 345 VTARPTTAPGGRPPKRPAFAPSAPP 369
>12_02_0035 -
12563503-12564405,12564494-12565611,12565709-12566239,
12566337-12567153
Length = 1122
Score = 27.1 bits (57), Expect = 7.6
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 219 PQSCPQNRPPAVCSGDL 169
P+SCP + PP V S DL
Sbjct: 257 PESCPSSLPPFVVSSDL 273
Score = 27.1 bits (57), Expect = 7.6
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 219 PQSCPQNRPPAVCSGDL 169
P+SCP + PP V S DL
Sbjct: 434 PESCPSSLPPFVVSSDL 450
>11_04_0068 -
13116037-13116414,13116501-13116947,13117026-13117757,
13118235-13118348
Length = 556
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 124 LSAQLITAPTGRPREIRNFAPAEPP 50
++A TAP GRP + FAP+ PP
Sbjct: 514 VTASPTTAPGGRPPKRPAFAPSAPP 538
>10_08_0356 +
17141107-17141165,17141502-17141650,17141748-17141969,
17142051-17142187,17142319-17142570,17143915-17144063,
17144476-17144540,17144633-17144701,17145014-17145144,
17145218-17145505,17145669-17145811,17145898-17145951,
17146000-17146080,17149048-17149222,17149223-17149647,
17149929-17150144,17150279-17150309
Length = 881
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 344 DTRIVLKVYKYSITPXERFPLPDDHCRHYLFPEFRFTLCDC 222
D I Y +I +R+P+P+ +C Y F ++ CDC
Sbjct: 575 DYYIQQSTYMGNIILDDRWPVPEPYCSIYF---FLYSPCDC 612
>06_01_0944 +
7264833-7265120,7265511-7265600,7265702-7265798,
7265927-7265988,7266508-7266596,7266702-7266822,
7266915-7267058,7267492-7267820,7268154-7268394,
7269042-7269245,7271150-7271619,7272703-7272746,
7273121-7273211,7273494-7273596,7273682-7273783,
7274214-7274300,7274421-7274531
Length = 890
Score = 27.1 bits (57), Expect = 7.6
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = -3
Query: 412 SAHSLATGPVMAEP---FISPLLLTMTPALSSKYINTPSRLXNGFRCLMTTAGITFFRSS 242
+AH+LA EP + P+ TM S K PS NG+ + GI R +
Sbjct: 120 AAHALAEAETRPEPQDLWKEPINATMWRPCSDKRTWEPSEGTNGYIMISANGGINQQRVA 179
Query: 241 GLPFVTVATIMS 206
VT++ +++
Sbjct: 180 ICNAVTISRLLN 191
>03_03_0140 +
14771293-14771821,14772343-14772455,14772723-14772830,
14772931-14772973,14773454-14773593,14774216-14774446
Length = 387
Score = 27.1 bits (57), Expect = 7.6
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = -3
Query: 409 AHSLATGPVMAEPFISPLLLTMTPALSSKYINTPSRLXNGFRCLMTTA 266
AH ATGP ++ +TP LSS + + P+R + R L+ A
Sbjct: 76 AHVFATGPGGRPDLARSAVMRVTPGLSS-FADEPARAGDSLRPLIDFA 122
>02_05_0373 +
28374298-28374380,28375126-28375303,28375975-28376065,
28376162-28376256,28376379-28376468,28376789-28376837,
28376941-28377079,28377224-28377340,28377437-28377527,
28377604-28377746,28378009-28378123,28378439-28378483,
28378565-28378645
Length = 438
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/59 (22%), Positives = 30/59 (50%)
Frame = +3
Query: 231 KGKPELRKKVMPAVVIRQRKPFXRRDGVFIYFEDNAGVIVNNKGEMXGSAITGPVAKEC 407
K P +V AV R+ +++ VF+ ++ +++++KG + +TG + +C
Sbjct: 153 KPVPNATLQVTGAVGWRREGLMYKKNEVFLDIVESVNLLMSSKGSVLRCDVTGKILMKC 211
>01_06_1575 + 38339970-38340786,38340884-38342001,38342099-38343055
Length = 963
Score = 27.1 bits (57), Expect = 7.6
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 219 PQSCPQNRPPAVCSGDL 169
P+SCP + PP V S DL
Sbjct: 257 PESCPSSLPPFVVSSDL 273
>01_06_0680 + 31132683-31133499,31133597-31134717,31134811-31135713
Length = 946
Score = 27.1 bits (57), Expect = 7.6
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 219 PQSCPQNRPPAVCSGDL 169
P+SCP + PP V S DL
Sbjct: 257 PESCPSSLPPFVVSSDL 273
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,988,166
Number of Sequences: 37544
Number of extensions: 275843
Number of successful extensions: 942
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 955200320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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