Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc25l11
(471 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-3487|AAF46914.1| 140|Drosophila melanogaster CG3661-PA... 244 5e-65
M85295-1|AAA28867.1| 140|Drosophila melanogaster ribosomal prot... 229 1e-60
BT023778-1|AAZ41787.1| 2016|Drosophila melanogaster LD21067p pro... 29 4.2
AY128444-1|AAM75037.1| 1332|Drosophila melanogaster LD21041p pro... 29 4.2
AE014134-1407|AAF52607.1| 2016|Drosophila melanogaster CG8552-PA... 29 4.2
BT021370-1|AAX33518.1| 884|Drosophila melanogaster LP07893p pro... 27 9.7
BT004503-1|AAO42667.1| 2201|Drosophila melanogaster GH07949p pro... 27 9.7
AE014298-2950|ABC67193.1| 1456|Drosophila melanogaster CG32529-P... 27 9.7
AE014298-2949|AAF49024.2| 1280|Drosophila melanogaster CG32529-P... 27 9.7
AE014298-2947|AAF49026.2| 2529|Drosophila melanogaster CG32529-P... 27 9.7
AE014296-1467|AAF50407.1| 681|Drosophila melanogaster CG6765-PA... 27 9.7
>AE013599-3487|AAF46914.1| 140|Drosophila melanogaster CG3661-PA
protein.
Length = 140
Score = 244 bits (597), Expect = 5e-65
Identities = 118/127 (92%), Positives = 119/127 (93%)
Frame = +3
Query: 69 KFRISLGLPVGAVINCADNTGAKNLYVIAVQGIXGRLNRLPAAGSGDMIVATVTKGKPEL 248
KFRISLGLPVGAV+NCADNTGAKNLYVIAV GI GRLNRLPAAG GDM VATV KGKPEL
Sbjct: 13 KFRISLGLPVGAVMNCADNTGAKNLYVIAVHGIRGRLNRLPAAGVGDMFVATVKKGKPEL 72
Query: 249 RKKVMPAVVIRQRKPFXRRDGVFIYFEDNAGVIVNNKGEMXGSAITGPVAKECADLWPRI 428
RKKVMPAVVIRQRKPF RRDGVFIYFEDNAGVIVNNKGEM GSAITGPVAKECADLWPRI
Sbjct: 73 RKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRI 132
Query: 429 ASXASSI 449
AS ASSI
Sbjct: 133 ASNASSI 139
>M85295-1|AAA28867.1| 140|Drosophila melanogaster ribosomal protein
L17A protein.
Length = 140
Score = 229 bits (561), Expect = 1e-60
Identities = 112/127 (88%), Positives = 113/127 (88%)
Frame = +3
Query: 69 KFRISLGLPVGAVINCADNTGAKNLYVIAVQGIXGRLNRLPAAGSGDMIVATVTKGKPEL 248
KFRISLGLPVGAV+NCADNTGAKNLYVIAV GI GRLNRLPAAG GDM VATV KGKPEL
Sbjct: 13 KFRISLGLPVGAVMNCADNTGAKNLYVIAVHGIRGRLNRLPAAGVGDMFVATVKKGKPEL 72
Query: 249 RKKVMPAVVIRQRKPFXRRDGVFIYFEDNAGVIVNNKGEMXGSAITGPVAKECADLWPRI 428
RKKV RQRKPF RRDGVFIYFEDNAGVIVNNKGEM GSAITGPVAKECADLWPRI
Sbjct: 73 RKKVSVVPSARQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRI 132
Query: 429 ASXASSI 449
AS ASSI
Sbjct: 133 ASNASSI 139
>BT023778-1|AAZ41787.1| 2016|Drosophila melanogaster LD21067p protein.
Length = 2016
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -3
Query: 217 TIMSPEPAAGSLFRRPXIPWTAITYRFFAPVLSAQLITAPTG 92
TI++P P S IP T + P SA+L+ AP G
Sbjct: 1011 TILTPAPDTTSTLFANNIPTTTPSIPDIVPTTSAELVDAPPG 1052
>AY128444-1|AAM75037.1| 1332|Drosophila melanogaster LD21041p
protein.
Length = 1332
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -3
Query: 217 TIMSPEPAAGSLFRRPXIPWTAITYRFFAPVLSAQLITAPTG 92
TI++P P S IP T + P SA+L+ AP G
Sbjct: 327 TILTPAPDTTSTLFANNIPTTTPSIPDIVPTTSAELVDAPPG 368
>AE014134-1407|AAF52607.1| 2016|Drosophila melanogaster CG8552-PA
protein.
Length = 2016
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -3
Query: 217 TIMSPEPAAGSLFRRPXIPWTAITYRFFAPVLSAQLITAPTG 92
TI++P P S IP T + P SA+L+ AP G
Sbjct: 1011 TILTPAPDTTSTLFANNIPTTTPSIPDIVPTTSAELVDAPPG 1052
>BT021370-1|AAX33518.1| 884|Drosophila melanogaster LP07893p
protein.
Length = 884
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +2
Query: 83 PGSPSGSSNQLRRQHRGKESVCDRCPRYXRSPEQTAGGRFWGHDCGHSH 229
P S +GS QL++Q E+ + + + G+ GH H+H
Sbjct: 232 PVSAAGSPTQLQQQQAAAEAAAAAADQAAAQSQSQSQGQSHGHAHSHAH 280
>BT004503-1|AAO42667.1| 2201|Drosophila melanogaster GH07949p protein.
Length = 2201
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +2
Query: 83 PGSPSGSSNQLRRQHRGKESVCDRCPRYXRSPEQTAGGRFWGHDCGHSH 229
P S +GS QL++Q E+ + + + G+ GH H+H
Sbjct: 977 PVSAAGSPTQLQQQQAAAEAAAAAADQAAAQSQSQSQGQSHGHAHSHAH 1025
>AE014298-2950|ABC67193.1| 1456|Drosophila melanogaster CG32529-PD,
isoform D protein.
Length = 1456
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +2
Query: 83 PGSPSGSSNQLRRQHRGKESVCDRCPRYXRSPEQTAGGRFWGHDCGHSH 229
P S +GS QL++Q E+ + + + G+ GH H+H
Sbjct: 232 PVSAAGSPTQLQQQQAAAEAAAAAADQAAAQSQSQSQGQSHGHAHSHAH 280
>AE014298-2949|AAF49024.2| 1280|Drosophila melanogaster CG32529-PC,
isoform C protein.
Length = 1280
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +2
Query: 83 PGSPSGSSNQLRRQHRGKESVCDRCPRYXRSPEQTAGGRFWGHDCGHSH 229
P S +GS QL++Q E+ + + + G+ GH H+H
Sbjct: 56 PVSAAGSPTQLQQQQAAAEAAAAAADQAAAQSQSQSQGQSHGHAHSHAH 104
>AE014298-2947|AAF49026.2| 2529|Drosophila melanogaster CG32529-PA,
isoform A protein.
Length = 2529
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +2
Query: 83 PGSPSGSSNQLRRQHRGKESVCDRCPRYXRSPEQTAGGRFWGHDCGHSH 229
P S +GS QL++Q E+ + + + G+ GH H+H
Sbjct: 1305 PVSAAGSPTQLQQQQAAAEAAAAAADQAAAQSQSQSQGQSHGHAHSHAH 1353
>AE014296-1467|AAF50407.1| 681|Drosophila melanogaster CG6765-PA
protein.
Length = 681
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 212 HVPRTGRRQSVQATXDTLDSDHIQILCPCVVGAVDYCSHW 93
+VP+ RR S Q + +D DH+ +LC + D + W
Sbjct: 557 YVPKKRRRVSQQE--NNMDHDHVTLLCDLCSTSFDTPAEW 594
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,617,189
Number of Sequences: 53049
Number of extensions: 461250
Number of successful extensions: 1464
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1464
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1601407269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -