Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc25l04
(685 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC103741-1|AAI03742.1| 144|Homo sapiens cornichon homolog (Dros... 103 6e-22
AY358635-1|AAQ88998.1| 144|Homo sapiens CNIL protein. 103 6e-22
AF104398-1|AAC98388.1| 144|Homo sapiens cornichon protein. 103 6e-22
AF031379-1|AAD32301.1| 134|Homo sapiens cornichon-like protein ... 103 6e-22
BC047953-1|AAH47953.1| 160|Homo sapiens cornichon homolog 2 (Dr... 76 1e-13
BC022780-1|AAH22780.1| 160|Homo sapiens cornichon homolog 3 (Dr... 73 7e-13
AL596330-1|CAH73437.1| 160|Homo sapiens cornichon homolog 3 (Dr... 73 7e-13
AK096312-1|BAC04760.1| 160|Homo sapiens protein ( Homo sapiens ... 73 7e-13
BC000573-1|AAH00573.1| 139|Homo sapiens cornichon homolog 4 (Dr... 49 2e-05
AK222634-1|BAD96354.1| 139|Homo sapiens HSPC163 protein variant... 48 2e-05
Z83067-1|CAB05445.1| 1455|Homo sapiens FAA protein. 32 2.2
X99226-1|CAA67610.1| 1455|Homo sapiens Fanconi anemia complement... 32 2.2
BT007366-1|AAP36030.1| 297|Homo sapiens Fanconi anemia, complem... 32 2.2
BC141972-1|AAI41973.1| 297|Homo sapiens Fanconi anemia, complem... 32 2.2
BC141971-1|AAI41972.1| 297|Homo sapiens Fanconi anemia, complem... 32 2.2
BC127633-1|AAI27634.1| 297|Homo sapiens Fanconi anemia, complem... 32 2.2
BC120979-1|AAI20980.1| 302|Homo sapiens FANCA protein protein. 32 2.2
BC120978-1|AAI20979.1| 265|Homo sapiens FANCA protein protein. 32 2.2
BC064540-1|AAH64540.1| 297|Homo sapiens Fanconi anemia, complem... 32 2.2
BC022498-1|AAH22498.1| 280|Homo sapiens FANCA protein protein. 32 2.2
BC008979-1|AAH08979.1| 297|Homo sapiens Fanconi anemia, complem... 32 2.2
AY598423-1|AAS99350.1| 1429|Homo sapiens Fanconi anemia, complem... 32 2.2
AC005567-1|AAC33401.1| 660|Homo sapiens FAA protein. 32 2.2
AC005565-1|AAC33304.1| 236|Homo sapiens FAA protein. 32 2.2
AB209547-1|BAD92784.1| 907|Homo sapiens ALL1 fused gene from 5q... 31 5.0
>BC103741-1|AAI03742.1| 144|Homo sapiens cornichon homolog
(Drosophila) protein.
Length = 144
Score = 103 bits (247), Expect = 6e-22
Identities = 47/94 (50%), Positives = 59/94 (62%)
Frame = +2
Query: 257 LVLPEYXXXXXXXXXXXXSGEWFSLLINIPLILYHIHRYYTRPVMSGPGLYDPTSIMNAD 436
LVLPEY + EW +L +N+PL+ YHI RY +RPVMSGPGLYDPT+IMNAD
Sbjct: 51 LVLPEYLIHAFFCVMFLCAAEWLTLGLNMPLLAYHIWRYMSRPVMSGPGLYDPTTIMNAD 110
Query: 437 VLTSCQREGWIKXXXXXXXXXXXXXGMIVVLIAA 538
+L CQ+EGW K GMI VL+++
Sbjct: 111 ILAYCQKEGWCKLAFYLLAFFYYLYGMIYVLVSS 144
Score = 87.8 bits (208), Expect = 3e-17
Identities = 38/53 (71%), Positives = 47/53 (88%)
Frame = +1
Query: 43 MAFSFPAFAYIVALITDAFLIFFSIFHVIAFDELKTDYKNPIDQCNSLNPVSL 201
MAF+F AF Y++AL+ A LIFF+I+H+IAFDELKTDYKNPIDQCN+LNP+ L
Sbjct: 1 MAFTFAAFCYMLALLLTAALIFFAIWHIIAFDELKTDYKNPIDQCNTLNPLVL 53
>AY358635-1|AAQ88998.1| 144|Homo sapiens CNIL protein.
Length = 144
Score = 103 bits (247), Expect = 6e-22
Identities = 47/94 (50%), Positives = 59/94 (62%)
Frame = +2
Query: 257 LVLPEYXXXXXXXXXXXXSGEWFSLLINIPLILYHIHRYYTRPVMSGPGLYDPTSIMNAD 436
LVLPEY + EW +L +N+PL+ YHI RY +RPVMSGPGLYDPT+IMNAD
Sbjct: 51 LVLPEYLIHAFFCVMFLCAAEWLTLGLNMPLLAYHIWRYMSRPVMSGPGLYDPTTIMNAD 110
Query: 437 VLTSCQREGWIKXXXXXXXXXXXXXGMIVVLIAA 538
+L CQ+EGW K GMI VL+++
Sbjct: 111 ILAYCQKEGWCKLAFYLLAFFYYLYGMIYVLVSS 144
Score = 87.8 bits (208), Expect = 3e-17
Identities = 38/53 (71%), Positives = 47/53 (88%)
Frame = +1
Query: 43 MAFSFPAFAYIVALITDAFLIFFSIFHVIAFDELKTDYKNPIDQCNSLNPVSL 201
MAF+F AF Y++AL+ A LIFF+I+H+IAFDELKTDYKNPIDQCN+LNP+ L
Sbjct: 1 MAFTFAAFCYMLALLLTAALIFFAIWHIIAFDELKTDYKNPIDQCNTLNPLVL 53
>AF104398-1|AAC98388.1| 144|Homo sapiens cornichon protein.
Length = 144
Score = 103 bits (247), Expect = 6e-22
Identities = 47/94 (50%), Positives = 59/94 (62%)
Frame = +2
Query: 257 LVLPEYXXXXXXXXXXXXSGEWFSLLINIPLILYHIHRYYTRPVMSGPGLYDPTSIMNAD 436
LVLPEY + EW +L +N+PL+ YHI RY +RPVMSGPGLYDPT+IMNAD
Sbjct: 51 LVLPEYLIHAFFCVMFLCAAEWLTLGLNMPLLAYHIWRYMSRPVMSGPGLYDPTTIMNAD 110
Query: 437 VLTSCQREGWIKXXXXXXXXXXXXXGMIVVLIAA 538
+L CQ+EGW K GMI VL+++
Sbjct: 111 ILAYCQKEGWCKLAFYLLAFFYYLYGMIYVLVSS 144
Score = 87.8 bits (208), Expect = 3e-17
Identities = 38/53 (71%), Positives = 47/53 (88%)
Frame = +1
Query: 43 MAFSFPAFAYIVALITDAFLIFFSIFHVIAFDELKTDYKNPIDQCNSLNPVSL 201
MAF+F AF Y++AL+ A LIFF+I+H+IAFDELKTDYKNPIDQCN+LNP+ L
Sbjct: 1 MAFTFAAFCYMLALLLTAALIFFAIWHIIAFDELKTDYKNPIDQCNTLNPLVL 53
>AF031379-1|AAD32301.1| 134|Homo sapiens cornichon-like protein
protein.
Length = 134
Score = 103 bits (247), Expect = 6e-22
Identities = 47/94 (50%), Positives = 59/94 (62%)
Frame = +2
Query: 257 LVLPEYXXXXXXXXXXXXSGEWFSLLINIPLILYHIHRYYTRPVMSGPGLYDPTSIMNAD 436
LVLPEY + EW +L +N+PL+ YHI RY +RPVMSGPGLYDPT+IMNAD
Sbjct: 41 LVLPEYLIHAFFCVMFLCAAEWLTLGLNMPLLAYHIWRYMSRPVMSGPGLYDPTTIMNAD 100
Query: 437 VLTSCQREGWIKXXXXXXXXXXXXXGMIVVLIAA 538
+L CQ+EGW K GMI VL+++
Sbjct: 101 ILAYCQKEGWCKLAFYLLAFFYYLYGMIYVLVSS 134
Score = 72.5 bits (170), Expect = 1e-12
Identities = 31/43 (72%), Positives = 39/43 (90%)
Frame = +1
Query: 73 IVALITDAFLIFFSIFHVIAFDELKTDYKNPIDQCNSLNPVSL 201
++AL+ A LIFF+I+H+IAFDELKTDYKNPIDQCN+LNP+ L
Sbjct: 1 MLALLLTAALIFFAIWHIIAFDELKTDYKNPIDQCNTLNPLVL 43
>BC047953-1|AAH47953.1| 160|Homo sapiens cornichon homolog 2
(Drosophila) protein.
Length = 160
Score = 76.2 bits (179), Expect = 1e-13
Identities = 35/96 (36%), Positives = 49/96 (51%)
Frame = +2
Query: 248 LFQLVLPEYXXXXXXXXXXXXSGEWFSLLINIPLILYHIHRYYTRPVMSGPGLYDPTSIM 427
L +LV+PEY + EW +L +NIPL+ YH+ RY+ RP +YD SIM
Sbjct: 64 LRKLVVPEYSIHGLFCLMFLCAAEWVTLGLNIPLLFYHLWRYFHRPADGSEVMYDAVSIM 123
Query: 428 NADVLTSCQREGWIKXXXXXXXXXXXXXGMIVVLIA 535
NAD+L CQ+E W K M+ L++
Sbjct: 124 NADILNYCQKESWCKLAFYLLSFFYYLYSMVYTLVS 159
Score = 68.5 bits (160), Expect = 2e-11
Identities = 30/46 (65%), Positives = 38/46 (82%)
Frame = +1
Query: 43 MAFSFPAFAYIVALITDAFLIFFSIFHVIAFDELKTDYKNPIDQCN 180
MAF+F AF Y++ L+ A LIFF I+H+IAFDEL+TD+KNPIDQ N
Sbjct: 1 MAFTFAAFCYMLTLVLCASLIFFVIWHIIAFDELRTDFKNPIDQGN 46
>BC022780-1|AAH22780.1| 160|Homo sapiens cornichon homolog 3
(Drosophila) protein.
Length = 160
Score = 73.3 bits (172), Expect = 7e-13
Identities = 30/49 (61%), Positives = 43/49 (87%)
Frame = +1
Query: 43 MAFSFPAFAYIVALITDAFLIFFSIFHVIAFDELKTDYKNPIDQCNSLN 189
MAF+F AF Y+++L+ A LIFF+I+H+IAFDEL+TD+K+PIDQCN ++
Sbjct: 1 MAFTFAAFCYMLSLVLCAALIFFAIWHIIAFDELRTDFKSPIDQCNPVH 49
Score = 71.3 bits (167), Expect = 3e-12
Identities = 35/97 (36%), Positives = 48/97 (49%)
Frame = +2
Query: 248 LFQLVLPEYXXXXXXXXXXXXSGEWFSLLINIPLILYHIHRYYTRPVMSGPGLYDPTSIM 427
L +LVLPEY + EW +L +N+PL+ YH RY+ P S YDP +M
Sbjct: 64 LRKLVLPEYSIHSLFCIMFLCAQEWLTLGLNVPLLFYHFWRYFHCPADSSELAYDPPVVM 123
Query: 428 NADVLTSCQREGWIKXXXXXXXXXXXXXGMIVVLIAA 538
NAD L+ CQ+E W K MI L+++
Sbjct: 124 NADTLSYCQKEAWCKLAFYLLSFFYYLYCMIYTLVSS 160
>AL596330-1|CAH73437.1| 160|Homo sapiens cornichon homolog 3
(Drosophila) protein.
Length = 160
Score = 73.3 bits (172), Expect = 7e-13
Identities = 30/49 (61%), Positives = 43/49 (87%)
Frame = +1
Query: 43 MAFSFPAFAYIVALITDAFLIFFSIFHVIAFDELKTDYKNPIDQCNSLN 189
MAF+F AF Y+++L+ A LIFF+I+H+IAFDEL+TD+K+PIDQCN ++
Sbjct: 1 MAFTFAAFCYMLSLVLCAALIFFAIWHIIAFDELRTDFKSPIDQCNPVH 49
Score = 71.3 bits (167), Expect = 3e-12
Identities = 35/97 (36%), Positives = 48/97 (49%)
Frame = +2
Query: 248 LFQLVLPEYXXXXXXXXXXXXSGEWFSLLINIPLILYHIHRYYTRPVMSGPGLYDPTSIM 427
L +LVLPEY + EW +L +N+PL+ YH RY+ P S YDP +M
Sbjct: 64 LRKLVLPEYSIHSLFCIMFLCAQEWLTLGLNVPLLFYHFWRYFHCPADSSELAYDPPVVM 123
Query: 428 NADVLTSCQREGWIKXXXXXXXXXXXXXGMIVVLIAA 538
NAD L+ CQ+E W K MI L+++
Sbjct: 124 NADTLSYCQKEAWCKLAFYLLSFFYYLYCMIYTLVSS 160
>AK096312-1|BAC04760.1| 160|Homo sapiens protein ( Homo sapiens
cDNA FLJ38993 fis, clone NT2RI2009194, highly similar to
CORNICHON-LIKE PROTEIN. ).
Length = 160
Score = 73.3 bits (172), Expect = 7e-13
Identities = 30/49 (61%), Positives = 43/49 (87%)
Frame = +1
Query: 43 MAFSFPAFAYIVALITDAFLIFFSIFHVIAFDELKTDYKNPIDQCNSLN 189
MAF+F AF Y+++L+ A LIFF+I+H+IAFDEL+TD+K+PIDQCN ++
Sbjct: 1 MAFTFAAFCYMLSLVLCAALIFFAIWHIIAFDELRTDFKSPIDQCNPVH 49
Score = 71.3 bits (167), Expect = 3e-12
Identities = 35/97 (36%), Positives = 48/97 (49%)
Frame = +2
Query: 248 LFQLVLPEYXXXXXXXXXXXXSGEWFSLLINIPLILYHIHRYYTRPVMSGPGLYDPTSIM 427
L +LVLPEY + EW +L +N+PL+ YH RY+ P S YDP +M
Sbjct: 64 LRKLVLPEYSIHSLFCIMFLCAQEWLTLGLNVPLLFYHFWRYFHCPADSSELAYDPPVVM 123
Query: 428 NADVLTSCQREGWIKXXXXXXXXXXXXXGMIVVLIAA 538
NAD L+ CQ+E W K MI L+++
Sbjct: 124 NADTLSYCQKEAWCKLAFYLLSFFYYLYCMIYTLVSS 160
>BC000573-1|AAH00573.1| 139|Homo sapiens cornichon homolog 4
(Drosophila) protein.
Length = 139
Score = 48.8 bits (111), Expect = 2e-05
Identities = 30/97 (30%), Positives = 43/97 (44%)
Frame = +2
Query: 242 SRLFQLVLPEYXXXXXXXXXXXXSGEWFSLLINIPLILYHIHRYYTRPVMSGPGLYDPTS 421
S+L + V+PE S WF L+N+P+ ++I+RY P G++DPT
Sbjct: 42 SKLNKWVIPELIGHTIVTVLLLMSLHWFIFLLNLPVATWNIYRYIMVP-SGNMGVFDPTE 100
Query: 422 IMNADVLTSCQREGWIKXXXXXXXXXXXXXGMIVVLI 532
I N L S +E IK MI+ LI
Sbjct: 101 IHNRGQLKSHMKEAMIKLGFHLLCFFMYLYSMILALI 137
Score = 33.9 bits (74), Expect = 0.54
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 61 AFAYIVALITDAFLIFFSIFHVIAFDELKTDYKNPIDQCNSLN 189
A ++ +L+ LIF S++ +I +L+ DY N C+ LN
Sbjct: 3 AVVFVFSLLDCCALIFLSVYFIITLSDLECDYINARSCCSKLN 45
>AK222634-1|BAD96354.1| 139|Homo sapiens HSPC163 protein variant
protein.
Length = 139
Score = 48.4 bits (110), Expect = 2e-05
Identities = 29/97 (29%), Positives = 43/97 (44%)
Frame = +2
Query: 242 SRLFQLVLPEYXXXXXXXXXXXXSGEWFSLLINIPLILYHIHRYYTRPVMSGPGLYDPTS 421
S+L + V+PE S WF L+N+P+ ++I+RY P G++DPT
Sbjct: 42 SKLNKWVIPELIGHTIVTVLLLMSLHWFIFLLNLPVATWNIYRYIMVP-SGNMGVFDPTE 100
Query: 422 IMNADVLTSCQREGWIKXXXXXXXXXXXXXGMIVVLI 532
I N L S +E IK MI+ L+
Sbjct: 101 IHNRGQLKSHMKEAMIKLGFHLLCFFMYLYSMILALV 137
Score = 33.5 bits (73), Expect = 0.72
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 61 AFAYIVALITDAFLIFFSIFHVIAFDELKTDYKNPIDQCNSLN 189
A ++ +L+ LIF S++ +I +L+ DY N C+ LN
Sbjct: 3 AVVFVFSLLGCCALIFLSVYFIITLSDLECDYINARSCCSKLN 45
>Z83067-1|CAB05445.1| 1455|Homo sapiens FAA protein.
Length = 1455
Score = 31.9 bits (69), Expect = 2.2
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 234 PSFHVCFSWFCRNIYCICSLMYCSC 308
P H SW RN+ C+C M SC
Sbjct: 201 PDMHAVGSWLFRNLCCLCEQMEASC 225
>X99226-1|CAA67610.1| 1455|Homo sapiens Fanconi anemia
complementation group A protein protein.
Length = 1455
Score = 31.9 bits (69), Expect = 2.2
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 234 PSFHVCFSWFCRNIYCICSLMYCSC 308
P H SW RN+ C+C M SC
Sbjct: 201 PDMHAVGSWLFRNLCCLCEQMEASC 225
>BT007366-1|AAP36030.1| 297|Homo sapiens Fanconi anemia,
complementation group A protein.
Length = 297
Score = 31.9 bits (69), Expect = 2.2
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 234 PSFHVCFSWFCRNIYCICSLMYCSC 308
P H SW RN+ C+C M SC
Sbjct: 201 PDMHAVGSWLFRNLCCLCEQMEASC 225
>BC141972-1|AAI41973.1| 297|Homo sapiens Fanconi anemia,
complementation group A protein.
Length = 297
Score = 31.9 bits (69), Expect = 2.2
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 234 PSFHVCFSWFCRNIYCICSLMYCSC 308
P H SW RN+ C+C M SC
Sbjct: 201 PDMHAVGSWLFRNLCCLCEQMEASC 225
>BC141971-1|AAI41972.1| 297|Homo sapiens Fanconi anemia,
complementation group A protein.
Length = 297
Score = 31.9 bits (69), Expect = 2.2
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 234 PSFHVCFSWFCRNIYCICSLMYCSC 308
P H SW RN+ C+C M SC
Sbjct: 201 PDMHAVGSWLFRNLCCLCEQMEASC 225
>BC127633-1|AAI27634.1| 297|Homo sapiens Fanconi anemia,
complementation group A protein.
Length = 297
Score = 31.9 bits (69), Expect = 2.2
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 234 PSFHVCFSWFCRNIYCICSLMYCSC 308
P H SW RN+ C+C M SC
Sbjct: 201 PDMHAVGSWLFRNLCCLCEQMEASC 225
>BC120979-1|AAI20980.1| 302|Homo sapiens FANCA protein protein.
Length = 302
Score = 31.9 bits (69), Expect = 2.2
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 234 PSFHVCFSWFCRNIYCICSLMYCSC 308
P H SW RN+ C+C M SC
Sbjct: 201 PDMHAVGSWLFRNLCCLCEQMEASC 225
>BC120978-1|AAI20979.1| 265|Homo sapiens FANCA protein protein.
Length = 265
Score = 31.9 bits (69), Expect = 2.2
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 234 PSFHVCFSWFCRNIYCICSLMYCSC 308
P H SW RN+ C+C M SC
Sbjct: 169 PDMHAVGSWLFRNLCCLCEQMEASC 193
>BC064540-1|AAH64540.1| 297|Homo sapiens Fanconi anemia,
complementation group A protein.
Length = 297
Score = 31.9 bits (69), Expect = 2.2
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 234 PSFHVCFSWFCRNIYCICSLMYCSC 308
P H SW RN+ C+C M SC
Sbjct: 201 PDMHAVGSWLFRNLCCLCEQMEASC 225
>BC022498-1|AAH22498.1| 280|Homo sapiens FANCA protein protein.
Length = 280
Score = 31.9 bits (69), Expect = 2.2
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 234 PSFHVCFSWFCRNIYCICSLMYCSC 308
P H SW RN+ C+C M SC
Sbjct: 184 PDMHAVGSWLFRNLCCLCEQMEASC 208
>BC008979-1|AAH08979.1| 297|Homo sapiens Fanconi anemia,
complementation group A protein.
Length = 297
Score = 31.9 bits (69), Expect = 2.2
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 234 PSFHVCFSWFCRNIYCICSLMYCSC 308
P H SW RN+ C+C M SC
Sbjct: 201 PDMHAVGSWLFRNLCCLCEQMEASC 225
>AY598423-1|AAS99350.1| 1429|Homo sapiens Fanconi anemia,
complementation group A protein.
Length = 1429
Score = 31.9 bits (69), Expect = 2.2
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 234 PSFHVCFSWFCRNIYCICSLMYCSC 308
P H SW RN+ C+C M SC
Sbjct: 175 PDMHAVGSWLFRNLCCLCEQMEASC 199
>AC005567-1|AAC33401.1| 660|Homo sapiens FAA protein.
Length = 660
Score = 31.9 bits (69), Expect = 2.2
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 234 PSFHVCFSWFCRNIYCICSLMYCSC 308
P H SW RN+ C+C M SC
Sbjct: 27 PDMHAVGSWLFRNLCCLCEQMEASC 51
>AC005565-1|AAC33304.1| 236|Homo sapiens FAA protein.
Length = 236
Score = 31.9 bits (69), Expect = 2.2
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 234 PSFHVCFSWFCRNIYCICSLMYCSC 308
P H SW RN+ C+C M SC
Sbjct: 201 PDMHAVGSWLFRNLCCLCEQMEASC 225
>AB209547-1|BAD92784.1| 907|Homo sapiens ALL1 fused gene from 5q31
variant protein.
Length = 907
Score = 30.7 bits (66), Expect = 5.0
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = -2
Query: 354 SIKGMLINNENHSPDSKNSTLMSKCSKYSGKTN*NRREMRV 232
S+K +N+ S SKNS+ SK K GKT+ + +E++V
Sbjct: 847 SLKSSSNSNKETSGSSKNSSSTSKQKKTEGKTSSSSKEVKV 887
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,499,615
Number of Sequences: 237096
Number of extensions: 1755884
Number of successful extensions: 7290
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 7198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7290
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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