Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc25k23
(553 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 23 2.7
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 22 3.6
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 21 6.3
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 21 8.3
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 21 8.3
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 21 8.3
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 21 8.3
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 21 8.3
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 21 8.3
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 21 8.3
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 21 8.3
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 8.3
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 8.3
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 22.6 bits (46), Expect = 2.7
Identities = 10/41 (24%), Positives = 18/41 (43%)
Frame = +3
Query: 102 PTCTTECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQ 224
P C++ +D G ++ PD+ L +M H+ Q
Sbjct: 135 PIVYASCKLQAAAVDHQGSVLDGPDSPPLVESQMHHQMHTQ 175
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 3.6
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +2
Query: 293 KNARGMQRDAS--RNQRVYRRSRN*LRLQARLSTRYTRRR 406
+N+R +R+ + +N+R YR+ R + ++R T R R
Sbjct: 37 RNSRSREREQNSYKNEREYRKYRETSKERSRDRTERERSR 76
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 21.4 bits (43), Expect = 6.3
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +3
Query: 255 FNRAIKYYFNFPPKTLEECNAMLRETKGFIGDHEI 359
F +++ + N P +TL + + +L ET GD+ I
Sbjct: 214 FLKSVPIFKNLPEETLIKISDVLEETFYNNGDYII 248
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.0 bits (42), Expect = 8.3
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +3
Query: 273 YYFNFPPKTL 302
YY NFPP+++
Sbjct: 122 YYGNFPPRSM 131
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.0 bits (42), Expect = 8.3
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +3
Query: 273 YYFNFPPKTL 302
YY NFPP+++
Sbjct: 122 YYGNFPPRSM 131
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.0 bits (42), Expect = 8.3
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +3
Query: 273 YYFNFPPKTL 302
YY NFPP+++
Sbjct: 122 YYGNFPPRSM 131
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.0 bits (42), Expect = 8.3
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +2
Query: 299 ARGMQRDASRNQRVYRRSRN*LRLQARLSTRYTRRR 406
+R ++++ +N+R YR+ R + ++R T R R
Sbjct: 42 SREREQNSYKNEREYRKYRETSKERSRDRTERERSR 77
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 8.3
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +2
Query: 299 ARGMQRDASRNQRVYRRSRN*LRLQARLSTRYTRRR 406
+R ++++ +N+R YR+ R + ++R T R R
Sbjct: 42 SREREQNSYKNEREYRKYRETSKERSRDRTERERSR 77
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 8.3
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +2
Query: 299 ARGMQRDASRNQRVYRRSRN*LRLQARLSTRYTRRR 406
+R ++++ +N+R YR+ R + ++R T R R
Sbjct: 42 SREREQNSYKNEREYRKYRETSKERSRDRTERERSR 77
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 8.3
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +2
Query: 299 ARGMQRDASRNQRVYRRSRN*LRLQARLSTRYTRRR 406
+R ++++ +N+R YR+ R + ++R T R R
Sbjct: 42 SREREQNSYKNEREYRKYRETSKERSRDRTERERSR 77
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 8.3
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +2
Query: 299 ARGMQRDASRNQRVYRRSRN*LRLQARLSTRYTRRR 406
+R ++++ +N+R YR+ R + ++R T R R
Sbjct: 42 SREREQNSYKNEREYRKYRETSKERSRDRTERERSR 77
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.0 bits (42), Expect = 8.3
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +2
Query: 299 ARGMQRDASRNQRVYRRSRN*LRLQARLSTRYTRRR 406
+R ++++ +N+R YR+ R + ++R T R R
Sbjct: 275 SREREQNSYKNEREYRKYRERSKERSRDRTERERSR 310
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.0 bits (42), Expect = 8.3
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +3
Query: 273 YYFNFPPKTL 302
YY NFPP+++
Sbjct: 355 YYGNFPPRSM 364
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,119
Number of Sequences: 438
Number of extensions: 3103
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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