Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc25j21
         (433 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D32053-1|BAA22084.1|  597|Homo sapiens Lysyl tRNA Synthetase pro...    85   1e-16
D31890-1|BAA06688.1|  601|Homo sapiens KIAA0070 protein.               85   1e-16
BC004132-1|AAH04132.1|  597|Homo sapiens lysyl-tRNA synthetase p...    85   1e-16
AF285758-1|AAG30114.1|  625|Homo sapiens lysyl-tRNA synthetase p...    85   1e-16
AK126584-1|BAC86604.1|  423|Homo sapiens protein ( Homo sapiens ...    34   0.18 

>D32053-1|BAA22084.1|  597|Homo sapiens Lysyl tRNA Synthetase
           protein.
          Length = 597

 Score = 84.6 bits (200), Expect = 1e-16
 Identities = 41/71 (57%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
 Frame = +3

Query: 219 QEEEISPNEYYKLRSGAVAALK-NGLKEDHPYPHKFNVSISLEEFIEKYQNLNNGDVLEN 395
           +EE + PN+YYK+RS A+  LK NG  ED PYPHKF+V ISL +FI+KY +L  GD L +
Sbjct: 67  EEESVDPNQYYKIRSQAIHQLKVNG--ED-PYPHKFHVDISLTDFIQKYSHLQPGDHLTD 123

Query: 396 VTLSVAGRVHS 428
           +TL VAGR+H+
Sbjct: 124 ITLKVAGRIHA 134


>D31890-1|BAA06688.1|  601|Homo sapiens KIAA0070 protein.
          Length = 601

 Score = 84.6 bits (200), Expect = 1e-16
 Identities = 41/71 (57%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
 Frame = +3

Query: 219 QEEEISPNEYYKLRSGAVAALK-NGLKEDHPYPHKFNVSISLEEFIEKYQNLNNGDVLEN 395
           +EE + PN+YYK+RS A+  LK NG  ED PYPHKF+V ISL +FI+KY +L  GD L +
Sbjct: 71  EEESVDPNQYYKIRSQAIHQLKVNG--ED-PYPHKFHVDISLTDFIQKYSHLQPGDHLTD 127

Query: 396 VTLSVAGRVHS 428
           +TL VAGR+H+
Sbjct: 128 ITLKVAGRIHA 138


>BC004132-1|AAH04132.1|  597|Homo sapiens lysyl-tRNA synthetase
           protein.
          Length = 597

 Score = 84.6 bits (200), Expect = 1e-16
 Identities = 41/71 (57%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
 Frame = +3

Query: 219 QEEEISPNEYYKLRSGAVAALK-NGLKEDHPYPHKFNVSISLEEFIEKYQNLNNGDVLEN 395
           +EE + PN+YYK+RS A+  LK NG  ED PYPHKF+V ISL +FI+KY +L  GD L +
Sbjct: 67  EEESVDPNQYYKIRSQAIHQLKVNG--ED-PYPHKFHVDISLTDFIQKYSHLQPGDHLTD 123

Query: 396 VTLSVAGRVHS 428
           +TL VAGR+H+
Sbjct: 124 ITLKVAGRIHA 134


>AF285758-1|AAG30114.1|  625|Homo sapiens lysyl-tRNA synthetase
           protein.
          Length = 625

 Score = 84.6 bits (200), Expect = 1e-16
 Identities = 41/71 (57%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
 Frame = +3

Query: 219 QEEEISPNEYYKLRSGAVAALK-NGLKEDHPYPHKFNVSISLEEFIEKYQNLNNGDVLEN 395
           +EE + PN+YYK+RS A+  LK NG  ED PYPHKF+V ISL +FI+KY +L  GD L +
Sbjct: 95  EEESVDPNQYYKIRSQAIHQLKVNG--ED-PYPHKFHVDISLTDFIQKYSHLQPGDHLTD 151

Query: 396 VTLSVAGRVHS 428
           +TL VAGR+H+
Sbjct: 152 ITLKVAGRIHA 162


>AK126584-1|BAC86604.1|  423|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44621 fis, clone BRACE2016896, highly  similar
           to Lysyl-tRNA synthetase (EC 6.1.1.6). ).
          Length = 423

 Score = 34.3 bits (75), Expect = 0.18
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = +3

Query: 219 QEEEISPNEYYKLRSGAVAALKNGLKEDHPYPHKFNVSISLEEFIEK 359
           +EE + PN+YYK+RS A+  L  GLK+      +  + + L +F+ +
Sbjct: 67  EEESVDPNQYYKIRSQAI-HLHFGLKDKETRYRQRYLDLILNDFVRQ 112


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,402,665
Number of Sequences: 237096
Number of extensions: 792384
Number of successful extensions: 5314
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5310
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3430805640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)