Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc25j19
         (646 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical...    44   1e-04
Z82059-11|CAC42351.2|  591|Caenorhabditis elegans Hypothetical p...    42   5e-04
Z82059-10|CAB04878.2|  589|Caenorhabditis elegans Hypothetical p...    42   5e-04
DQ338465-1|ABC67522.1|  690|Caenorhabditis elegans KEL-8 protein.      37   0.014
AF067946-5|AAC17684.4|  690|Caenorhabditis elegans Hypothetical ...    37   0.014
AF519108-1|AAM74222.1|  909|Caenorhabditis elegans EOR-1 protein.      35   0.043
AF502568-1|AAM74151.1|  909|Caenorhabditis elegans EOR-1 protein.      35   0.043
AF100669-8|AAK39268.1|  909|Caenorhabditis elegans Egl-1 suppres...    35   0.043
Z79759-4|CAB02139.2|  395|Caenorhabditis elegans Hypothetical pr...    33   0.17 
U67737-1|AAC63596.1|  395|Caenorhabditis elegans MEL-26 protein.       33   0.17 
U13072-5|AAK31400.1|  390|Caenorhabditis elegans Hypothetical pr...    32   0.30 
U13072-4|AAL00851.1|  397|Caenorhabditis elegans Hypothetical pr...    32   0.30 
AL032663-3|CAA21761.1|  320|Caenorhabditis elegans Hypothetical ...    32   0.40 
U80839-11|AAB37912.2|  261|Caenorhabditis elegans Hypothetical p...    31   0.92 
U56963-6|AAB38123.3|  324|Caenorhabditis elegans Serpentine rece...    29   3.7  
Z68216-4|CAA92463.2|  565|Caenorhabditis elegans Hypothetical pr...    28   4.9  
U80954-5|AAB38096.1|  822|Caenorhabditis elegans Hypothetical pr...    28   4.9  
AL132865-13|CAB60609.1|  496|Caenorhabditis elegans Hypothetical...    28   4.9  
Z81099-1|CAB03187.1|  600|Caenorhabditis elegans Hypothetical pr...    28   6.5  

>AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical
           protein R12E2.1 protein.
          Length = 531

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 20/38 (52%), Positives = 25/38 (65%)
 Frame = +3

Query: 225 GLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMF 338
           GL +R  L DVTL    + + AH++VLS CSPYF  MF
Sbjct: 48  GLKNRDVLCDVTLICGWKRINAHRVVLSACSPYFLSMF 85


>Z82059-11|CAC42351.2|  591|Caenorhabditis elegans Hypothetical
           protein T27E9.4b protein.
          Length = 591

 Score = 41.5 bits (93), Expect = 5e-04
 Identities = 19/43 (44%), Positives = 27/43 (62%)
 Frame = +3

Query: 219 FHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMN 347
           F+ L S+  L DV L  E R L AHK++L+   PYF+ MF ++
Sbjct: 41  FNELRSKCQLCDVALLVENRKLSAHKVILAATIPYFRGMFTLD 83


>Z82059-10|CAB04878.2|  589|Caenorhabditis elegans Hypothetical
           protein T27E9.4a protein.
          Length = 589

 Score = 41.5 bits (93), Expect = 5e-04
 Identities = 19/43 (44%), Positives = 27/43 (62%)
 Frame = +3

Query: 219 FHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMN 347
           F+ L S+  L DV L  E R L AHK++L+   PYF+ MF ++
Sbjct: 41  FNELRSKCQLCDVALLVENRKLSAHKVILAATIPYFRGMFTLD 83


>DQ338465-1|ABC67522.1|  690|Caenorhabditis elegans KEL-8 protein.
          Length = 690

 Score = 36.7 bits (81), Expect = 0.014
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = +3

Query: 243 DLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMF 338
           +L DV L   G +++AH+ +L+  SPYF+ MF
Sbjct: 109 ELCDVELLVAGSVIRAHRYILAAASPYFKAMF 140


>AF067946-5|AAC17684.4|  690|Caenorhabditis elegans Hypothetical
           protein W02G9.2 protein.
          Length = 690

 Score = 36.7 bits (81), Expect = 0.014
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = +3

Query: 243 DLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMF 338
           +L DV L   G +++AH+ +L+  SPYF+ MF
Sbjct: 109 ELCDVELLVAGSVIRAHRYILAAASPYFKAMF 140


>AF519108-1|AAM74222.1|  909|Caenorhabditis elegans EOR-1 protein.
          Length = 909

 Score = 35.1 bits (77), Expect = 0.043
 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
 Frame = +3

Query: 147 VAIMASDEQFSLCWNNFHANMSAGFHGLLSR-------GDLVDVTLAAEGRLLQAHKLVL 305
           + ++AS E   LC   F  +     H L  R       G   DV +  + +   AH+ +L
Sbjct: 1   MTLVASSENTGLCPMTFDDSSGQTSHMLFQRLQYQRKTGRFCDVEIVVQNKSFAAHRNIL 60

Query: 306 SVCSPYFQEMFK 341
           +  SPYF  +FK
Sbjct: 61  AAHSPYFDAIFK 72


>AF502568-1|AAM74151.1|  909|Caenorhabditis elegans EOR-1 protein.
          Length = 909

 Score = 35.1 bits (77), Expect = 0.043
 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
 Frame = +3

Query: 147 VAIMASDEQFSLCWNNFHANMSAGFHGLLSR-------GDLVDVTLAAEGRLLQAHKLVL 305
           + ++AS E   LC   F  +     H L  R       G   DV +  + +   AH+ +L
Sbjct: 1   MTLVASSENTGLCPMTFDDSSGQTSHMLFQRLQYQRKTGRFCDVEIVVQNKSFAAHRNIL 60

Query: 306 SVCSPYFQEMFK 341
           +  SPYF  +FK
Sbjct: 61  AAHSPYFDAIFK 72


>AF100669-8|AAK39268.1|  909|Caenorhabditis elegans Egl-1
           suppressor/dio uptake defective/raf enhancer protein 1
           protein.
          Length = 909

 Score = 35.1 bits (77), Expect = 0.043
 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
 Frame = +3

Query: 147 VAIMASDEQFSLCWNNFHANMSAGFHGLLSR-------GDLVDVTLAAEGRLLQAHKLVL 305
           + ++AS E   LC   F  +     H L  R       G   DV +  + +   AH+ +L
Sbjct: 1   MTLVASSENTGLCPMTFDDSSGQTSHMLFQRLQYQRKTGRFCDVEIVVQNKSFAAHRNIL 60

Query: 306 SVCSPYFQEMFK 341
           +  SPYF  +FK
Sbjct: 61  AAHSPYFDAIFK 72


>Z79759-4|CAB02139.2|  395|Caenorhabditis elegans Hypothetical
           protein ZK858.4 protein.
          Length = 395

 Score = 33.1 bits (72), Expect = 0.17
 Identities = 19/70 (27%), Positives = 30/70 (42%)
 Frame = +3

Query: 144 VVAIMASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPY 323
           V  I  ++E       N    +   +  L S+  L D  +   G++++AHK VL+  SP 
Sbjct: 166 VETITTTNEPIQFEPTNSEQQLIEDYQRLFSQELLCDFAINVNGKIIRAHKAVLAARSPV 225

Query: 324 FQEMFKMNPT 353
           F  M     T
Sbjct: 226 FNAMLTHQDT 235


>U67737-1|AAC63596.1|  395|Caenorhabditis elegans MEL-26 protein.
          Length = 395

 Score = 33.1 bits (72), Expect = 0.17
 Identities = 19/70 (27%), Positives = 30/70 (42%)
 Frame = +3

Query: 144 VVAIMASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPY 323
           V  I  ++E       N    +   +  L S+  L D  +   G++++AHK VL+  SP 
Sbjct: 166 VETITTTNEPIQFEPTNSEQQLIEDYQRLFSQELLCDFAINVNGKIIRAHKAVLAARSPV 225

Query: 324 FQEMFKMNPT 353
           F  M     T
Sbjct: 226 FNAMLTHQDT 235


>U13072-5|AAK31400.1|  390|Caenorhabditis elegans Hypothetical
           protein C07D10.2a protein.
          Length = 390

 Score = 32.3 bits (70), Expect = 0.30
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +3

Query: 201 ANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFK 341
           ++++     L   G   D TL  E R L+AHK +L+  SP F  M +
Sbjct: 187 SDVTKDLENLYRSGKHADFTLVVEERELKAHKAILAARSPVFAAMME 233


>U13072-4|AAL00851.1|  397|Caenorhabditis elegans Hypothetical
           protein C07D10.2b protein.
          Length = 397

 Score = 32.3 bits (70), Expect = 0.30
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +3

Query: 201 ANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFK 341
           ++++     L   G   D TL  E R L+AHK +L+  SP F  M +
Sbjct: 194 SDVTKDLENLYRSGKHADFTLVVEERELKAHKAILAARSPVFAAMME 240


>AL032663-3|CAA21761.1|  320|Caenorhabditis elegans Hypothetical
           protein Y75B12B.4 protein.
          Length = 320

 Score = 31.9 bits (69), Expect = 0.40
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +3

Query: 246 LVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMN 347
           L DV L  EG+ +   K VL+  S +FQ+MF  N
Sbjct: 159 LTDVVLVLEGKHVHVGKQVLATSSQFFQKMFYSN 192


>U80839-11|AAB37912.2|  261|Caenorhabditis elegans Hypothetical
           protein ZC204.3 protein.
          Length = 261

 Score = 30.7 bits (66), Expect = 0.92
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +3

Query: 213 AGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFK 341
           A +  + S  +  D  L  E + L  +K  LS+ S YF E+FK
Sbjct: 98  AEYEKMFSESEDTDAVLVVEDKRLHVNKEFLSLHSTYFAELFK 140


>U56963-6|AAB38123.3|  324|Caenorhabditis elegans Serpentine
           receptor, class v protein31 protein.
          Length = 324

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 589 IVFVVTTWGLASKSALVWMAWNFLHF 512
           ++F  TTWGL +K  +  M + + HF
Sbjct: 59  MIFYTTTWGLRTKPGIREMLYTYQHF 84


>Z68216-4|CAA92463.2|  565|Caenorhabditis elegans Hypothetical
           protein F27C8.5 protein.
          Length = 565

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 10/40 (25%), Positives = 23/40 (57%)
 Frame = +1

Query: 373 LKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQV 492
           + D    ++R +  +MY GE+++ +  +A  ++ A  L+V
Sbjct: 76  MTDFDPDSVRRVFDWMYSGEIDIPETTIADVLAVASYLRV 115


>U80954-5|AAB38096.1|  822|Caenorhabditis elegans Hypothetical
           protein T07F8.1 protein.
          Length = 822

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +1

Query: 427 GEVNVKQEELASFISTAEQLQVKGLTGNQ 513
           G    K EE+  +I  ++++  +GLTGNQ
Sbjct: 650 GPTKQKLEEVLDYIGCSQKINYQGLTGNQ 678


>AL132865-13|CAB60609.1|  496|Caenorhabditis elegans Hypothetical
           protein Y62E10A.16 protein.
          Length = 496

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +3

Query: 219 FHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMF 338
           +  L  +G+  D+ LAA GR  + HKL L   + +F+ MF
Sbjct: 60  YQKLFLQGENSDIVLAACGREWRVHKLYLKQ-TKFFESMF 98


>Z81099-1|CAB03187.1|  600|Caenorhabditis elegans Hypothetical
           protein K08F9.2 protein.
          Length = 600

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +3

Query: 297 LVLSVCSPYFQEMFKMNPTQHPIVFFKRC*SFCT-KRLITV 416
           L +  C  +   + +  PT++PI F   C +FC  K L+ V
Sbjct: 413 LAIVACYKHVVVLSRGTPTENPIEFHSTCVAFCAEKSLVAV 453


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,144,322
Number of Sequences: 27780
Number of extensions: 279713
Number of successful extensions: 591
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 591
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)