Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc25j18
(629 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 38 0.002
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 36 0.004
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 36 0.005
SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr 2... 36 0.005
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 36 0.005
SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schiz... 35 0.008
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 35 0.011
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 34 0.015
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 34 0.019
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 33 0.045
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 32 0.059
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 31 0.10
SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr 2|||M... 31 0.10
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 31 0.18
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 29 0.55
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 29 0.55
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 29 0.73
SPAC12B10.03 |||WD repeat protein, human WDR20 family|Schizosacc... 29 0.73
SPBC1A4.07c |||U3 snoRNP-associated protein Sof1|Schizosaccharom... 29 0.73
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 28 0.97
SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase |Schizosa... 28 0.97
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 28 1.3
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 28 1.3
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 28 1.3
SPCC16C4.08c |skb15||Shk1 kinase binding protein 15|Schizosaccha... 28 1.3
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 27 1.7
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 27 2.2
SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit S... 27 2.2
SPAC3F10.13 |ucp6||UBA domain protein Ucp6|Schizosaccharomyces p... 27 2.2
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 27 2.2
SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 27 2.2
SPBC609.03 |||WD repeat protein, human IQWD1 family|Schizosaccha... 26 3.9
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 26 3.9
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 25 6.8
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 25 6.8
SPCC1235.09 |||histone deacetylase complex subunit|Schizosacchar... 25 6.8
SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr... 25 9.0
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 25 9.0
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 25 9.0
SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor Raf1|S... 25 9.0
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 37.5 bits (83), Expect = 0.002
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 510 VFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGQ 626
VFS H ++ D NG+ V+G D A +W VE+GQ
Sbjct: 397 VFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQ 435
Score = 26.6 bits (56), Expect = 3.0
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +3
Query: 501 SALVFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVE 617
S L H SV P+G+ +G D +A +WS++
Sbjct: 572 SYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWSID 610
Score = 25.8 bits (54), Expect = 5.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 555 PNGKLAVTGGEDDKAYVWSVESGQV 629
P+GK VTG ED + +W + + +V
Sbjct: 370 PDGKYLVTGTEDRQIKLWDLSTQKV 394
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 36.3 bits (80), Expect = 0.004
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 510 VFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESG 623
VF+ H+ V C HPN +TG D +W V G
Sbjct: 458 VFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRG 495
Score = 26.6 bits (56), Expect = 3.0
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 522 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVES 620
H G V+ P+ K ++ ED A +WSV++
Sbjct: 378 HSGPVYGTTFSPDNKYLLSCSEDASARLWSVDT 410
Score = 26.2 bits (55), Expect = 3.9
Identities = 10/43 (23%), Positives = 20/43 (46%)
Frame = +3
Query: 498 HSALVFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGQ 626
HS VF+ H V + P+G + + ++W + +G+
Sbjct: 496 HSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGR 538
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 35.9 bits (79), Expect = 0.005
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +3
Query: 510 VFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGQV 629
V HVG V+ ++P+ + ++ G D K +W++ESG++
Sbjct: 612 VLRGHVGRVYSVTINPSRQQCISAGTDAKIRIWNLESGEL 651
>SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 426
Score = 35.9 bits (79), Expect = 0.005
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 522 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVES 620
H SV HPNG + TGG+D A VW + +
Sbjct: 299 HSDSVLTGSWHPNGNILATGGQDTTAKVWDIRA 331
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 35.9 bits (79), Expect = 0.005
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 513 FSKHVGSVFCCDLHP-NGKLAVTGGEDDKAYVWSVESGQ 626
F +H SVF ++P + L +GG DD Y+W + +G+
Sbjct: 57 FFEHKDSVFSVSINPVHSNLCASGGGDDLGYIWDITTGE 95
Score = 28.7 bits (61), Expect = 0.73
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 513 FSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVE 617
++ H + C + P+GK VTG +D + V+ E
Sbjct: 364 YTGHQEPILCMAITPDGKRVVTGSDDTELLVFDCE 398
Score = 27.5 bits (58), Expect = 1.7
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 552 HPNGKLAVTGGEDDKAYVWSVESGQV 629
HP G G D ++WS+ SG+V
Sbjct: 155 HPKGLFLAAGCNDGSIWMWSLPSGKV 180
>SPAC4D7.05 |sum1|tif34|translation initiation factor
eIF3i|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 35.1 bits (77), Expect = 0.008
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +3
Query: 513 FSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGQ 626
+ H G+++ CD++ + L V+G D+ +W V++G+
Sbjct: 48 YEGHTGAIWTCDINKSSTLMVSGAADNTMRLWDVKTGK 85
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 34.7 bits (76), Expect = 0.011
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 510 VFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGQ 626
VF H G V C +H +G +GG+D +W V +G+
Sbjct: 374 VFIGHKGRVRCLSVHVSGNWLASGGDDGVLRIWEVMTGR 412
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 34.3 bits (75), Expect = 0.015
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +3
Query: 510 VFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESG 623
VF H V C HPN TG D +W V +G
Sbjct: 482 VFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTG 519
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 33.9 bits (74), Expect = 0.019
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +3
Query: 498 HSALVFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVE 617
HS L H SV + PNG TG D +A +WS E
Sbjct: 545 HSQLTLQGHNNSVISVAVSPNGHCFATGSGDLRARIWSYE 584
Score = 29.1 bits (62), Expect = 0.55
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +3
Query: 522 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGQ 626
H ++ D +GK V+G D +W VE+G+
Sbjct: 375 HEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGE 409
Score = 25.8 bits (54), Expect = 5.2
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +3
Query: 513 FSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVES 620
F+ H + + P+GK ++G +D WS +S
Sbjct: 508 FTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDS 543
Score = 25.4 bits (53), Expect = 6.8
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +3
Query: 555 PNGKLAVTGGEDDKAYVWSVESGQV 629
P+GK TG ED + +W + +V
Sbjct: 344 PDGKYLATGVEDQQIRIWDIAQKRV 368
Score = 25.4 bits (53), Expect = 6.8
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 522 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVE 617
H SV+ P+GK V+G D+ +W ++
Sbjct: 457 HEESVYSVAFSPDGKYLVSGSLDNTIKLWELQ 488
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 32.7 bits (71), Expect = 0.045
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 522 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVES 620
H S+F +HP+G TGG D +WS E+
Sbjct: 17 HRLSIFSIHIHPDGSRIATGGLDGTIRIWSTEA 49
Score = 27.9 bits (59), Expect = 1.3
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +3
Query: 516 SKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVE 617
S H G+V PNG+ +G +D +W E
Sbjct: 71 STHTGTVTSVRFSPNGQYLASGSDDRVVIIWHKE 104
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 32.3 bits (70), Expect = 0.059
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 510 VFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESG 623
V S H+G V C D+ P + TG D +W + SG
Sbjct: 158 VISGHLGWVRCVDVEPGNQWFCTGAGDRTIKIWDLASG 195
Score = 31.1 bits (67), Expect = 0.14
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 522 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGQ 626
H+ V+ LHP + VT G D A VW + + Q
Sbjct: 246 HLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTRQ 280
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 31.5 bits (68), Expect = 0.10
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +3
Query: 513 FSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVES 620
F H G V HP L V+GG+D K VW+ +S
Sbjct: 49 FDGHDGPVRGIAFHPTQPLFVSGGDDYKVNVWNYKS 84
Score = 30.7 bits (66), Expect = 0.18
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 522 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSV 614
H +V CC HP+ +L ++ ED VW +
Sbjct: 255 HFNNVSCCLFHPHQELILSASEDKTIRVWDL 285
Score = 25.8 bits (54), Expect = 5.2
Identities = 10/35 (28%), Positives = 15/35 (42%)
Frame = +3
Query: 510 VFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSV 614
+ + H V C HP+ L V+ D VW +
Sbjct: 132 ILTGHSHYVMCAAFHPSEDLIVSASLDQTVRVWDI 166
>SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 556
Score = 31.5 bits (68), Expect = 0.10
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 552 HPNGKLAVTGGEDDKAYVWSVESGQV 629
HP+GK + G Y+W +ES QV
Sbjct: 270 HPDGKRVIAAGRRKYMYIWDLESAQV 295
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 30.7 bits (66), Expect = 0.18
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 519 KHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESG 623
KH V C LH + K ++G D Y W + +G
Sbjct: 230 KHTAPVSCLALHGSEKKVLSGSWDKMVYYWDLNTG 264
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 29.1 bits (62), Expect = 0.55
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +3
Query: 522 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWS 611
H VF D P+G+ +GG D +WS
Sbjct: 472 HEDQVFAVDWSPDGQRVASGGADKAVRIWS 501
Score = 27.1 bits (57), Expect = 2.2
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 522 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVES 620
HV +V+ C + +L V+ +D VW V S
Sbjct: 430 HVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRS 462
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 29.1 bits (62), Expect = 0.55
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +3
Query: 522 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGQ 626
H +F P+G L +GG D +W + SG+
Sbjct: 306 HSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGK 340
Score = 27.1 bits (57), Expect = 2.2
Identities = 10/38 (26%), Positives = 16/38 (42%)
Frame = +3
Query: 501 SALVFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSV 614
S +V +H+ + PNG T DD +W +
Sbjct: 341 SIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDL 378
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 28.7 bits (61), Expect = 0.73
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 6/40 (15%)
Frame = +3
Query: 522 HVGSVFCCD-----LHPNGKLA-VTGGEDDKAYVWSVESG 623
H SV C D L P G++ VTG +D + W V++G
Sbjct: 216 HADSVTCIDALTGDLPPTGEIGMVTGSDDGSVHCWDVKTG 255
>SPAC12B10.03 |||WD repeat protein, human WDR20
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 28.7 bits (61), Expect = 0.73
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +3
Query: 498 HSALVFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWS 611
H VF + + C P+GK GG+DD ++S
Sbjct: 355 HVLDVFHSYFAGLTCVTWSPDGKFIAIGGKDDLVSIYS 392
>SPBC1A4.07c |||U3 snoRNP-associated protein
Sof1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 28.7 bits (61), Expect = 0.73
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 510 VFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESG 623
V+ HV +V D P G+ V+G D +++V G
Sbjct: 268 VYKDHVSAVMSVDFSPTGQEFVSGSYDKTIRIYNVREG 305
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 28.3 bits (60), Expect = 0.97
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +3
Query: 540 CCDLHPNGKLAVTGGEDDKAYVWSVESGQV 629
C D PNG+ V+G + + ++ S E+G++
Sbjct: 150 CIDYSPNGRFIVSGHQTGQLFLISTETGRL 179
>SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 889
Score = 28.3 bits (60), Expect = 0.97
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 288 DSLIRTVIQSVNMHGNEQNTPPSSLNGDEITSM 386
DS+ ++I V+ +G+ Q PPS ++ SM
Sbjct: 245 DSMSMSIISKVSSYGSRQTYPPSGIDDSSYCSM 277
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 27.9 bits (59), Expect = 1.3
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = +3
Query: 507 LVFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGQ 626
L + H G V C + PNG + G D +W S +
Sbjct: 215 LKLAAHNGVVLCVNYSPNGVFLASCGRDKTIRIWDSTSNK 254
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 27.9 bits (59), Expect = 1.3
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = +3
Query: 507 LVFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGQV 629
+ F H +V H +GK T ED VW + + V
Sbjct: 77 MTFEGHTNNVTAIAFHCDGKWLATSSEDGTVKVWDMRAPSV 117
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 27.9 bits (59), Expect = 1.3
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 522 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSV 614
H G V + P+G L +GG D +W +
Sbjct: 191 HTGYVSAVTISPDGSLCASGGRDGTLMLWDL 221
>SPCC16C4.08c |skb15||Shk1 kinase binding protein
15|Schizosaccharomyces pombe|chr 3|||Manual
Length = 341
Score = 27.9 bits (59), Expect = 1.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 549 LHPNGKLAVTGGEDDKAYVWSVESGQ 626
+HP+ KLA+T G D K +W + G+
Sbjct: 128 VHPSEKLALTVGGDGKLRLWDLVRGK 153
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 27.5 bits (58), Expect = 1.7
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +3
Query: 522 HVGSVFCCDLHPNGKLAVTGGEDDKAYVW 608
H GSV C D L V+G D +W
Sbjct: 260 HSGSVLCLDFCRRRNLLVSGSSDSTIIIW 288
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 27.1 bits (57), Expect = 2.2
Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 510 VFSKHVGSVFCCDLHP-NGKLAVTGGEDDKAYVWSV 614
+F H +V D +P + ++ +GG+D K +W V
Sbjct: 76 LFRGHTAAVLDTDWNPFHDQVLASGGDDSKIMIWKV 111
>SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit
Sop2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 377
Score = 27.1 bits (57), Expect = 2.2
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +3
Query: 504 ALVFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVW 608
A FS H V C D P VT +D AYV+
Sbjct: 48 ARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVY 82
Score = 26.6 bits (56), Expect = 3.0
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 531 SVFCCDLHPNGKLAVTGGEDDKAYVWS 611
++ D HPN L G D KAYV S
Sbjct: 148 TILSLDWHPNNVLLAAGCADRKAYVLS 174
>SPAC3F10.13 |ucp6||UBA domain protein Ucp6|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 612
Score = 27.1 bits (57), Expect = 2.2
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 519 KHVGSVFCCDLHPN 560
KHVG VFCC L N
Sbjct: 301 KHVGKVFCCSLPGN 314
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 27.1 bits (57), Expect = 2.2
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 519 KHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGQV 629
KH SV CC P+G +TG D WS+ +G++
Sbjct: 294 KHGFSVSCCCWLPDGLSFITGSPDCHITHWSL-NGEI 329
Score = 25.8 bits (54), Expect = 5.2
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +3
Query: 573 VTGGEDDKAYVWSVESGQV 629
++G EDDK +W ESG++
Sbjct: 444 LSGSEDDKIRIWHRESGKL 462
>SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit
Git5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 305
Score = 27.1 bits (57), Expect = 2.2
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 522 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGQ 626
H G V CC +G L +TG D W +E +
Sbjct: 105 HAGFVSCCKYVDDGHL-LTGSGDKTCMFWDIEQAK 138
>SPBC609.03 |||WD repeat protein, human IQWD1
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 26.2 bits (55), Expect = 3.9
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +3
Query: 522 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSV 614
H G V D +G+ ++G +D + VW V
Sbjct: 44 HTGCVNTLDWSADGEFLLSGSDDTRLIVWDV 74
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 26.2 bits (55), Expect = 3.9
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +3
Query: 522 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESG 623
H ++ +G+ +TG +D K VW + SG
Sbjct: 338 HYDALSTLQYSSDGQRIITGADDGKIKVWDMNSG 371
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 25.4 bits (53), Expect = 6.8
Identities = 8/18 (44%), Positives = 15/18 (83%)
Frame = +3
Query: 573 VTGGEDDKAYVWSVESGQ 626
++ G+D +A VW+VE+G+
Sbjct: 277 LSSGKDGRAMVWNVETGE 294
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = +3
Query: 522 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGQ 626
H + + +G L T D A +W V SGQ
Sbjct: 179 HSEPIISVSISADGTLCATASYDGMARIWDVLSGQ 213
Score = 25.0 bits (52), Expect = 9.0
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = +3
Query: 522 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWS 611
H SV C + PN + T D +WS
Sbjct: 53 HEKSVTCVSVSPNKRWIATSSSDGTIKIWS 82
>SPCC1235.09 |||histone deacetylase complex
subunit|Schizosaccharomyces pombe|chr 3|||Manual
Length = 564
Score = 25.4 bits (53), Expect = 6.8
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +3
Query: 510 VFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGQV 629
VF +H V NG+ TG +WS ++ ++
Sbjct: 470 VFMRHTAPVSALSFSHNGRYLATGDTSGGVCIWSCKTAKL 509
>SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 583
Score = 25.0 bits (52), Expect = 9.0
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -3
Query: 429 PVHPFRPGKLRPHPPY 382
P P P ++PHPPY
Sbjct: 147 PTSPHPPSFVQPHPPY 162
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 25.0 bits (52), Expect = 9.0
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 522 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGQ 626
H G+V + + + G DD+ VW++ESG+
Sbjct: 245 HYGTVNGLAWTSDARYLASCGTDDRIRVWNMESGR 279
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 25.0 bits (52), Expect = 9.0
Identities = 10/39 (25%), Positives = 16/39 (41%)
Frame = +3
Query: 501 SALVFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVE 617
S VF H + P G ++G D VW+++
Sbjct: 181 SMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIK 219
>SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor
Raf1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 638
Score = 25.0 bits (52), Expect = 9.0
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 555 PNGKLAVTGGEDDKAYVWSV 614
P G L VTGG D VW +
Sbjct: 556 PKGNLFVTGGSDGIVKVWDL 575
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,184,445
Number of Sequences: 5004
Number of extensions: 34990
Number of successful extensions: 166
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 165
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 279695522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -