Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc25j09
         (693 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22930-7|CAA80512.1|  274|Anopheles gambiae trypsin protein.           26   1.3  
Z18889-1|CAA79327.1|  274|Anopheles gambiae trypsin protein.           26   1.3  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    24   5.2  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    23   6.9  

>Z22930-7|CAA80512.1|  274|Anopheles gambiae trypsin protein.
          Length = 274

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -3

Query: 370 ANSKHESIGRRPAILTTPRPRYALLQK 290
           AN +H  +  RP+   +PRPRYA+ Q+
Sbjct: 23  ANQRHRLV--RPSPSFSPRPRYAVGQR 47


>Z18889-1|CAA79327.1|  274|Anopheles gambiae trypsin protein.
          Length = 274

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -3

Query: 370 ANSKHESIGRRPAILTTPRPRYALLQK 290
           AN +H  +  RP+   +PRPRYA+ Q+
Sbjct: 23  ANQRHRLV--RPSPSFSPRPRYAVGQR 47


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 45   DSIRRPFRFNQWRVYFKLFK*KPQTKRVAAA 137
            D ++RP  F + R +F   K  P   + AAA
Sbjct: 919  DKLKRPTPFERMRSFFSRTKPSPAGGKAAAA 949


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 613 LLIICITIHMLT*NFHTSRAGRS 545
           ++ +CIT+   + NF  SRAG S
Sbjct: 872 MMPLCITLEEDSKNFRKSRAGES 894


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 595,414
Number of Sequences: 2352
Number of extensions: 10430
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)