Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc25j09
         (693 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   3.6  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    21   8.4  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    21   8.4  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    21   8.4  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    21   8.4  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    21   8.4  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    21   8.4  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    21   8.4  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    21   8.4  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   8.4  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -2

Query: 620 VSTTYNMYNYSYAYLKFSHEQSGSLARSP 534
           +S  Y + NY+   ++F  ++  S+ R P
Sbjct: 21  ISNDYILDNYTSPIVEFLQQEDSSIRRDP 49


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 455 NRNYSTNNKKL 423
           N NY+TN KKL
Sbjct: 98  NNNYNTNYKKL 108


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 455 NRNYSTNNKKL 423
           N NY+TN KKL
Sbjct: 98  NNNYNTNYKKL 108


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 455 NRNYSTNNKKL 423
           N NY+TN KKL
Sbjct: 98  NNNYNTNYKKL 108


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 455 NRNYSTNNKKL 423
           N NY+TN KKL
Sbjct: 98  NNNYNTNYKKL 108


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 455 NRNYSTNNKKL 423
           N NY+TN KKL
Sbjct: 98  NNNYNTNYKKL 108


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 455 NRNYSTNNKKL 423
           N NY+TN KKL
Sbjct: 98  NNNYNTNYKKL 108


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 455 NRNYSTNNKKL 423
           N NY+TN KKL
Sbjct: 102 NNNYNTNYKKL 112


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 455 NRNYSTNNKKL 423
           N NY+TN KKL
Sbjct: 98  NNNYNTNYKKL 108


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1

Query: 342 AGPRSSRPRDHAMLSSKNV 286
           AGPRS   R +AML  K V
Sbjct: 483 AGPRSCVGRKYAMLKLKIV 501


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,556
Number of Sequences: 438
Number of extensions: 3178
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)