Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc25i20
(445 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 33 0.001
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 26 0.16
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 25 0.49
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 25 0.49
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 2.0
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 2.0
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 2.0
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 2.6
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 2.6
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 21 4.6
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 21 4.6
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 21 4.6
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 21 6.1
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 21 6.1
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 33.1 bits (72), Expect = 0.001
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = +1
Query: 217 AVEAIHSVNIVHHNINPEDIFMTGPDFDLYVGGMFGSLYKTFIKNNPQNI---TLYAAPE 387
A++ H+ IVH ++ P++I M+ FGS N Y APE
Sbjct: 167 ALQFCHNAGIVHADVKPKNILMSKNGQPKLTD--FGSSVLIGAPNEIDKFYGTPGYTAPE 224
Query: 388 QIKKVY-TPENDMYSLGIV 441
IK+ TP D+YSLGIV
Sbjct: 225 VIKQNRPTPAADIYSLGIV 243
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 26.2 bits (55), Expect = 0.16
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +1
Query: 217 AVEAIHSVNIVHHNINPEDIFMTGPDFDLYVGGMFGSLYKTFIKN-NPQNITLYAAPEQI 393
A + +HS NI++ ++ PE++ + + V F K Y APE I
Sbjct: 478 AFDYLHSRNIIYRDLKPENLLLDSQGYVKLVDFGFAKRLDHGRKTWTFCGTPEYVAPEVI 537
Query: 394 -KKVYTPENDMYSLGIVL 444
K + D +SLG+++
Sbjct: 538 LNKGHDISADYWSLGVLM 555
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 24.6 bits (51), Expect = 0.49
Identities = 14/80 (17%), Positives = 36/80 (45%)
Frame = +1
Query: 202 VDLXSAVEAIHSVNIVHHNINPEDIFMTGPDFDLYVGGMFGSLYKTFIKNNPQNITLYAA 381
+D+ + +HS +VH ++ +++ + + F + + + + ++ A
Sbjct: 704 LDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGF-CITEVMMLGSIVGTPVHMA 762
Query: 382 PEQIKKVYTPENDMYSLGIV 441
PE + Y D+Y+ GI+
Sbjct: 763 PELLSGHYDSSVDVYAFGIL 782
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 24.6 bits (51), Expect = 0.49
Identities = 14/80 (17%), Positives = 36/80 (45%)
Frame = +1
Query: 202 VDLXSAVEAIHSVNIVHHNINPEDIFMTGPDFDLYVGGMFGSLYKTFIKNNPQNITLYAA 381
+D+ + +HS +VH ++ +++ + + F + + + + ++ A
Sbjct: 742 LDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGF-CITEVMMLGSIVGTPVHMA 800
Query: 382 PEQIKKVYTPENDMYSLGIV 441
PE + Y D+Y+ GI+
Sbjct: 801 PELLSGHYDSSVDVYAFGIL 820
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.6 bits (46), Expect = 2.0
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = -3
Query: 341 NVLYRLPNMPPTYKSKSGPVMKISSG--LILWCT 246
NV+YR P T K + GP ++G I+ CT
Sbjct: 395 NVVYRPGENPVTQKREGGPPTGATTGPNEIVTCT 428
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.6 bits (46), Expect = 2.0
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = -3
Query: 341 NVLYRLPNMPPTYKSKSGPVMKISSG--LILWCT 246
NV+YR P T K + GP ++G I+ CT
Sbjct: 415 NVVYRPGENPVTQKREGGPPTGATTGPNEIVTCT 448
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.6 bits (46), Expect = 2.0
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = -3
Query: 341 NVLYRLPNMPPTYKSKSGPVMKISSG--LILWCT 246
NV+YR P T K + GP ++G I+ CT
Sbjct: 364 NVVYRPGENPVTQKREGGPPTGATTGPNEIVTCT 397
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.2 bits (45), Expect = 2.6
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = +3
Query: 78 IFCVTSKRVHVERLFETAQFANFC 149
+FC+T ++V +L ++ + FC
Sbjct: 431 LFCITEGGMYVFQLLDSYAVSGFC 454
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.2 bits (45), Expect = 2.6
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = +3
Query: 78 IFCVTSKRVHVERLFETAQFANFC 149
+FC+T ++V +L ++ + FC
Sbjct: 484 LFCITEGGMYVFQLLDSYAVSGFC 507
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.4 bits (43), Expect = 4.6
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +1
Query: 223 EAIHSVNIVHHNINPEDIF 279
+A+H+V + H+I +D F
Sbjct: 453 KALHNVMFIQHHIQRQDEF 471
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.4 bits (43), Expect = 4.6
Identities = 9/31 (29%), Positives = 13/31 (41%)
Frame = +2
Query: 332 TKHLSKTTLKI*LCTLHQNKSKKCTPPKMTC 424
T H+ + + + NKSK T P C
Sbjct: 288 TAHIKDSLIVLTSALQEMNKSKSITEPPKNC 318
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 21.4 bits (43), Expect = 4.6
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -2
Query: 282 HENIFGINIVVHDIYGMNR 226
HE+IFGI + +++ +R
Sbjct: 1114 HEDIFGITLRTAEVHNRSR 1132
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 21.0 bits (42), Expect = 6.1
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2
Query: 179 LAFILANLLIWXAPW 223
+AFI+ N+L W W
Sbjct: 454 VAFIIFNILYWSFIW 468
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 21.0 bits (42), Expect = 6.1
Identities = 6/25 (24%), Positives = 14/25 (56%)
Frame = +1
Query: 208 LXSAVEAIHSVNIVHHNINPEDIFM 282
+ +V H +VH ++ PE++ +
Sbjct: 18 ILESVHHCHHNGVVHRDLKPENLLL 42
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,176
Number of Sequences: 438
Number of extensions: 3047
Number of successful extensions: 17
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11574126
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -