Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc25i06
         (656 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC070145-1|AAH70145.1|  373|Homo sapiens lipoyltransferase 1 pro...   138   2e-32
BC009772-1|AAH09772.1|  373|Homo sapiens lipoyltransferase 1 pro...   138   2e-32
BC007001-1|AAH07001.1|  373|Homo sapiens lipoyltransferase 1 pro...   138   2e-32
AC092587-2|AAX88927.1|  373|Homo sapiens unknown protein.             138   2e-32
AB017567-1|BAA76368.1|  373|Homo sapiens lipoyltransferase protein.   138   2e-32
AB017566-1|BAA76367.1|  373|Homo sapiens lipoyltransferase protein.   138   2e-32
AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein.                  31   3.6  
L07590-1|AAB02613.1| 1150|Homo sapiens protein phosphatase 2A 13...    31   4.8  
BC065531-1|AAH65531.1| 1150|Homo sapiens protein phosphatase 2 (...    31   4.8  

>BC070145-1|AAH70145.1|  373|Homo sapiens lipoyltransferase 1
           protein.
          Length = 373

 Score =  138 bits (334), Expect = 2e-32
 Identities = 59/105 (56%), Positives = 77/105 (73%)
 Frame = +1

Query: 298 VFMSQSTDIYTNLALEDWLYKNMDFTNHHVMMVWRNEPCVVIGRHQNPWLEANVPLLSEK 477
           +  S S D+Y NLA+EDW++ +M+     ++  W+N P VVIGRHQNPW E N+ L+ E+
Sbjct: 33  ILQSISNDVYQNLAVEDWIHDHMNLEGKPILFFWQNSPSVVIGRHQNPWQECNLNLMREE 92

Query: 478 EIALARRNSGGGTVYHDRGNLNITFFAPRERYDRNYNLKLIKRAL 612
            I LARR SGGGTVYHD GN+N+TFF  +++YDR  NLKLI RAL
Sbjct: 93  GIKLARRRSGGGTVYHDMGNINLTFFTTKKKYDRMENLKLIVRAL 137


>BC009772-1|AAH09772.1|  373|Homo sapiens lipoyltransferase 1
           protein.
          Length = 373

 Score =  138 bits (334), Expect = 2e-32
 Identities = 59/105 (56%), Positives = 77/105 (73%)
 Frame = +1

Query: 298 VFMSQSTDIYTNLALEDWLYKNMDFTNHHVMMVWRNEPCVVIGRHQNPWLEANVPLLSEK 477
           +  S S D+Y NLA+EDW++ +M+     ++  W+N P VVIGRHQNPW E N+ L+ E+
Sbjct: 33  ILQSISNDVYQNLAVEDWIHDHMNLEGKPILFFWQNSPSVVIGRHQNPWQECNLNLMREE 92

Query: 478 EIALARRNSGGGTVYHDRGNLNITFFAPRERYDRNYNLKLIKRAL 612
            I LARR SGGGTVYHD GN+N+TFF  +++YDR  NLKLI RAL
Sbjct: 93  GIKLARRRSGGGTVYHDMGNINLTFFTTKKKYDRMENLKLIVRAL 137


>BC007001-1|AAH07001.1|  373|Homo sapiens lipoyltransferase 1
           protein.
          Length = 373

 Score =  138 bits (334), Expect = 2e-32
 Identities = 59/105 (56%), Positives = 77/105 (73%)
 Frame = +1

Query: 298 VFMSQSTDIYTNLALEDWLYKNMDFTNHHVMMVWRNEPCVVIGRHQNPWLEANVPLLSEK 477
           +  S S D+Y NLA+EDW++ +M+     ++  W+N P VVIGRHQNPW E N+ L+ E+
Sbjct: 33  ILQSISNDVYQNLAVEDWIHDHMNLEGKPILFFWQNSPSVVIGRHQNPWQECNLNLMREE 92

Query: 478 EIALARRNSGGGTVYHDRGNLNITFFAPRERYDRNYNLKLIKRAL 612
            I LARR SGGGTVYHD GN+N+TFF  +++YDR  NLKLI RAL
Sbjct: 93  GIKLARRRSGGGTVYHDMGNINLTFFTTKKKYDRMENLKLIVRAL 137


>AC092587-2|AAX88927.1|  373|Homo sapiens unknown protein.
          Length = 373

 Score =  138 bits (334), Expect = 2e-32
 Identities = 59/105 (56%), Positives = 77/105 (73%)
 Frame = +1

Query: 298 VFMSQSTDIYTNLALEDWLYKNMDFTNHHVMMVWRNEPCVVIGRHQNPWLEANVPLLSEK 477
           +  S S D+Y NLA+EDW++ +M+     ++  W+N P VVIGRHQNPW E N+ L+ E+
Sbjct: 33  ILQSISNDVYQNLAVEDWIHDHMNLEGKPILFFWQNSPSVVIGRHQNPWQECNLNLMREE 92

Query: 478 EIALARRNSGGGTVYHDRGNLNITFFAPRERYDRNYNLKLIKRAL 612
            I LARR SGGGTVYHD GN+N+TFF  +++YDR  NLKLI RAL
Sbjct: 93  GIKLARRRSGGGTVYHDMGNINLTFFTTKKKYDRMENLKLIVRAL 137


>AB017567-1|BAA76368.1|  373|Homo sapiens lipoyltransferase protein.
          Length = 373

 Score =  138 bits (334), Expect = 2e-32
 Identities = 59/105 (56%), Positives = 77/105 (73%)
 Frame = +1

Query: 298 VFMSQSTDIYTNLALEDWLYKNMDFTNHHVMMVWRNEPCVVIGRHQNPWLEANVPLLSEK 477
           +  S S D+Y NLA+EDW++ +M+     ++  W+N P VVIGRHQNPW E N+ L+ E+
Sbjct: 33  ILQSISNDVYQNLAVEDWIHDHMNLEGKPILFFWQNSPSVVIGRHQNPWQECNLNLMREE 92

Query: 478 EIALARRNSGGGTVYHDRGNLNITFFAPRERYDRNYNLKLIKRAL 612
            I LARR SGGGTVYHD GN+N+TFF  +++YDR  NLKLI RAL
Sbjct: 93  GIKLARRRSGGGTVYHDMGNINLTFFTTKKKYDRMENLKLIVRAL 137


>AB017566-1|BAA76367.1|  373|Homo sapiens lipoyltransferase protein.
          Length = 373

 Score =  138 bits (334), Expect = 2e-32
 Identities = 59/105 (56%), Positives = 77/105 (73%)
 Frame = +1

Query: 298 VFMSQSTDIYTNLALEDWLYKNMDFTNHHVMMVWRNEPCVVIGRHQNPWLEANVPLLSEK 477
           +  S S D+Y NLA+EDW++ +M+     ++  W+N P VVIGRHQNPW E N+ L+ E+
Sbjct: 33  ILQSISNDVYQNLAVEDWIHDHMNLEGKPILFFWQNSPSVVIGRHQNPWQECNLNLMREE 92

Query: 478 EIALARRNSGGGTVYHDRGNLNITFFAPRERYDRNYNLKLIKRAL 612
            I LARR SGGGTVYHD GN+N+TFF  +++YDR  NLKLI RAL
Sbjct: 93  GIKLARRRSGGGTVYHDMGNINLTFFTTKKKYDRMENLKLIVRAL 137


>AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein.
          Length = 5262

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 23/77 (29%), Positives = 30/77 (38%)
 Frame = -2

Query: 454 SPPAKDFDVFQ*PHMAHFSTPS*HDDL*SPCSYTTNPPEPSSYKYQSIET*TLTW*SPPQ 275
           SPP ++      P   H S P     L  P   +   P P S  +  +E   L   SPP+
Sbjct: 468 SPPPEELPASPLPEALHLSRPLEESPLSPPPEESPLSPPPESSPFSPLEESPL---SPPE 524

Query: 274 LEALSPFLMRPLCWMPQ 224
               SP L  PL   P+
Sbjct: 525 ESPPSPALETPLSPPPE 541


>L07590-1|AAB02613.1| 1150|Homo sapiens protein phosphatase 2A 130
           kDa regulatory subunit protein.
          Length = 1150

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +3

Query: 108 VKKTLTKQVKDGSSYGEKNSIQQCLHICWSCTENIYKKCCG-IQQSGRIKKGESASN*GG 284
           V + L K   D  S G    I+ CL I   C+E++ KKC   I+Q  + K G S S   G
Sbjct: 211 VTQILEKHKIDNFSSG--TDIKMCLDILLKCSEDL-KKCTDIIKQCIKKKSGSSISEGSG 267

Query: 285 DHQVS 299
           +  +S
Sbjct: 268 NDTIS 272


>BC065531-1|AAH65531.1| 1150|Homo sapiens protein phosphatase 2
           (formerly 2A), regulatory subunit B'', alpha protein.
          Length = 1150

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +3

Query: 108 VKKTLTKQVKDGSSYGEKNSIQQCLHICWSCTENIYKKCCG-IQQSGRIKKGESASN*GG 284
           V + L K   D  S G    I+ CL I   C+E++ KKC   I+Q  + K G S S   G
Sbjct: 211 VTQILEKHKIDNFSSG--TDIKMCLDILLKCSEDL-KKCTDIIKQCIKKKSGSSISEGSG 267

Query: 285 DHQVS 299
           +  +S
Sbjct: 268 NDTIS 272


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,984,902
Number of Sequences: 237096
Number of extensions: 2224918
Number of successful extensions: 4433
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4428
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)