Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc25i06
         (656 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094796-1|AAM11149.1|  396|Drosophila melanogaster LD22815p pro...   203   2e-52
AE013599-2215|AAF58045.2|  396|Drosophila melanogaster CG8446-PA...   203   2e-52
AY089411-1|AAL90149.1|  266|Drosophila melanogaster AT23490p pro...    28   9.7  
AE014297-3679|AAN14028.2|  297|Drosophila melanogaster CG13645-P...    28   9.7  
AE014297-3678|AAF56373.4|  389|Drosophila melanogaster CG13645-P...    28   9.7  

>AY094796-1|AAM11149.1|  396|Drosophila melanogaster LD22815p
           protein.
          Length = 396

 Score =  203 bits (495), Expect = 2e-52
 Identities = 90/129 (69%), Positives = 108/129 (83%)
 Frame = +1

Query: 265 VLPTEGEITKSVFMSQSTDIYTNLALEDWLYKNMDFTNHHVMMVWRNEPCVVIGRHQNPW 444
           V+P + EI KSVF+SQS+D++TNLALEDWLYKN DF+ HHV+++W N+PCVVIGRHQNP+
Sbjct: 50  VVP-DSEIKKSVFISQSSDVFTNLALEDWLYKNFDFSRHHVLLLWANDPCVVIGRHQNPF 108

Query: 445 LEANVPLLSEKEIALARRNSGGGTVYHDRGNLNITFFAPRERYDRNYNLKLIKRALFRSF 624
            EANV  L E+ I LARRNSGGG VYHD GNLN TFF+PRERYDR YNL ++ RALFR +
Sbjct: 109 TEANVSQLVERGITLARRNSGGGAVYHDLGNLNCTFFSPRERYDRKYNLNIVTRALFREW 168

Query: 625 GIKSTINER 651
            IK+ INER
Sbjct: 169 AIKAEINER 177


>AE013599-2215|AAF58045.2|  396|Drosophila melanogaster CG8446-PA
           protein.
          Length = 396

 Score =  203 bits (495), Expect = 2e-52
 Identities = 90/129 (69%), Positives = 108/129 (83%)
 Frame = +1

Query: 265 VLPTEGEITKSVFMSQSTDIYTNLALEDWLYKNMDFTNHHVMMVWRNEPCVVIGRHQNPW 444
           V+P + EI KSVF+SQS+D++TNLALEDWLYKN DF+ HHV+++W N+PCVVIGRHQNP+
Sbjct: 50  VVP-DSEIKKSVFISQSSDVFTNLALEDWLYKNFDFSRHHVLLLWANDPCVVIGRHQNPF 108

Query: 445 LEANVPLLSEKEIALARRNSGGGTVYHDRGNLNITFFAPRERYDRNYNLKLIKRALFRSF 624
            EANV  L E+ I LARRNSGGG VYHD GNLN TFF+PRERYDR YNL ++ RALFR +
Sbjct: 109 TEANVSQLVERGITLARRNSGGGAVYHDLGNLNCTFFSPRERYDRKYNLNIVTRALFREW 168

Query: 625 GIKSTINER 651
            IK+ INER
Sbjct: 169 AIKAEINER 177


>AY089411-1|AAL90149.1|  266|Drosophila melanogaster AT23490p
           protein.
          Length = 266

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
 Frame = +1

Query: 430 HQNPWLEANVPLLSEKEIALARRNSGGGTVYHDRGNLNITFFAPRERYDRN--YNLKLIK 603
           HQN W+     L   +       NSGGG    D  N ++  + PR  +D     +LKL+ 
Sbjct: 94  HQNQWMRTQAVLQHHQNYINNHINSGGGG-GDDGENTHLPGWLPRGLHDSRDPVHLKLLC 152

Query: 604 RA-LFRSFGI 630
            A L  SF +
Sbjct: 153 GADLLESFAV 162


>AE014297-3679|AAN14028.2|  297|Drosophila melanogaster CG13645-PB,
           isoform B protein.
          Length = 297

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
 Frame = +1

Query: 430 HQNPWLEANVPLLSEKEIALARRNSGGGTVYHDRGNLNITFFAPRERYDRN--YNLKLIK 603
           HQN W+     L   +       NSGGG    D  N ++  + PR  +D     +LKL+ 
Sbjct: 125 HQNQWMRTQAVLQHHQNYINNHINSGGGG-GDDGENTHLPGWLPRGLHDSRDPVHLKLLC 183

Query: 604 RA-LFRSFGI 630
            A L  SF +
Sbjct: 184 GADLLESFAV 193


>AE014297-3678|AAF56373.4|  389|Drosophila melanogaster CG13645-PA,
           isoform A protein.
          Length = 389

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
 Frame = +1

Query: 430 HQNPWLEANVPLLSEKEIALARRNSGGGTVYHDRGNLNITFFAPRERYDRN--YNLKLIK 603
           HQN W+     L   +       NSGGG    D  N ++  + PR  +D     +LKL+ 
Sbjct: 125 HQNQWMRTQAVLQHHQNYINNHINSGGGG-GDDGENTHLPGWLPRGLHDSRDPVHLKLLC 183

Query: 604 RA-LFRSFGI 630
            A L  SF +
Sbjct: 184 GADLLESFAV 193


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,022,536
Number of Sequences: 53049
Number of extensions: 666610
Number of successful extensions: 1946
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1942
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)