Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc25h22
(681 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X82641-1|CAA57963.1| 643|Drosophila melanogaster alpha 1,2 mann... 34 0.21
AE014298-1434|AAF46571.3| 643|Drosophila melanogaster CG32684-P... 34 0.21
X03636-1|CAA27285.1| 1127|Drosophila melanogaster per protein pr... 31 1.5
M30114-2|AAA28752.1| 1122|Drosophila melanogaster biological clo... 31 1.5
M30114-1|AAA28754.1| 1218|Drosophila melanogaster biological clo... 31 1.5
AL024485-7|CAA19677.1| 1156|Drosophila melanogaster EG:155E2.4,F... 31 1.5
AL024485-5|CAA19679.1| 1116|Drosophila melanogaster EG:155E2.4,F... 31 1.5
AL024485-4|CAA19678.1| 1212|Drosophila melanogaster EG:155E2.4,F... 31 1.5
AF033029-1|AAB87476.1| 1224|Drosophila melanogaster period clock... 31 1.5
AE014298-440|AAF45804.1| 1218|Drosophila melanogaster CG2647-PA ... 31 1.5
AB029252-1|BAB15926.1| 143|Drosophila melanogaster period protein. 31 1.5
AB029251-1|BAB15925.1| 143|Drosophila melanogaster period protein. 31 1.5
AB029250-1|BAB15924.1| 143|Drosophila melanogaster period protein. 31 1.5
AE014134-2809|AAF53588.1| 1441|Drosophila melanogaster CG15134-P... 31 1.9
AY525769-1|AAS48651.1| 1407|Drosophila melanogaster ADAM metallo... 30 2.5
AE014297-1887|AAZ83996.1| 959|Drosophila melanogaster CG7649-PA... 30 2.5
AE014297-1886|AAZ83995.1| 1407|Drosophila melanogaster CG7649-PB... 30 2.5
AY122110-1|AAM52622.1| 590|Drosophila melanogaster GH12419p pro... 29 4.5
AE014298-3087|AAZ52506.1| 590|Drosophila melanogaster CG11566-P... 29 4.5
>X82641-1|CAA57963.1| 643|Drosophila melanogaster alpha 1,2
mannosidase protein.
Length = 643
Score = 33.9 bits (74), Expect = 0.21
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +2
Query: 56 NIQFQSLINLLNLQATTIMSLNSNKIKADLIPDENDPKNVTLRLNSVPEECTDDD 220
NI ++I L A+ +S N N+IK +L N P+NV L+LN+ + DD+
Sbjct: 34 NINLSNIIRLNEKVASDSVSNNENQIK-ELNYVNNHPRNVYLKLNASSRDDEDDE 87
>AE014298-1434|AAF46571.3| 643|Drosophila melanogaster CG32684-PB,
isoform B protein.
Length = 643
Score = 33.9 bits (74), Expect = 0.21
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +2
Query: 56 NIQFQSLINLLNLQATTIMSLNSNKIKADLIPDENDPKNVTLRLNSVPEECTDDD 220
NI ++I L A+ +S N N+IK +L N P+NV L+LN+ + DD+
Sbjct: 34 NINLSNIIRLNEKVASDSVSNNENQIK-ELNYVNNHPRNVYLKLNASSRDDEDDE 87
>X03636-1|CAA27285.1| 1127|Drosophila melanogaster per protein
protein.
Length = 1127
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 335 TDAPATSGDDNNNRKVVDANEDEYTVDGLKLKSKYVAYYK 454
+D P +S + NN+K D+N + +DG S Y ++ K
Sbjct: 1044 SDPPCSSSNPANNKKYTDSNGNSDDMDGSSFSSFYSSFIK 1083
>M30114-2|AAA28752.1| 1122|Drosophila melanogaster biological clock
protein B protein.
Length = 1122
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 335 TDAPATSGDDNNNRKVVDANEDEYTVDGLKLKSKYVAYYK 454
+D P +S + NN+K D+N + +DG S Y ++ K
Sbjct: 1039 SDPPCSSSNPANNKKYTDSNGNSDDMDGSSFSSFYSSFIK 1078
>M30114-1|AAA28754.1| 1218|Drosophila melanogaster biological clock
protein A protein.
Length = 1218
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 335 TDAPATSGDDNNNRKVVDANEDEYTVDGLKLKSKYVAYYK 454
+D P +S + NN+K D+N + +DG S Y ++ K
Sbjct: 1135 SDPPCSSSNPANNKKYTDSNGNSDDMDGSSFSSFYSSFIK 1174
>AL024485-7|CAA19677.1| 1156|Drosophila melanogaster
EG:155E2.4,FBgn0003068;per protein.
Length = 1156
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 335 TDAPATSGDDNNNRKVVDANEDEYTVDGLKLKSKYVAYYK 454
+D P +S + NN+K D+N + +DG S Y ++ K
Sbjct: 1073 SDPPCSSSNPANNKKYTDSNGNSDDMDGSSFSSFYSSFIK 1112
>AL024485-5|CAA19679.1| 1116|Drosophila melanogaster
EG:155E2.4,FBgn0003068;per protein.
Length = 1116
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 335 TDAPATSGDDNNNRKVVDANEDEYTVDGLKLKSKYVAYYK 454
+D P +S + NN+K D+N + +DG S Y ++ K
Sbjct: 1033 SDPPCSSSNPANNKKYTDSNGNSDDMDGSSFSSFYSSFIK 1072
>AL024485-4|CAA19678.1| 1212|Drosophila melanogaster
EG:155E2.4,FBgn0003068;per protein.
Length = 1212
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 335 TDAPATSGDDNNNRKVVDANEDEYTVDGLKLKSKYVAYYK 454
+D P +S + NN+K D+N + +DG S Y ++ K
Sbjct: 1129 SDPPCSSSNPANNKKYTDSNGNSDDMDGSSFSSFYSSFIK 1168
>AF033029-1|AAB87476.1| 1224|Drosophila melanogaster period clock
protein protein.
Length = 1224
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 335 TDAPATSGDDNNNRKVVDANEDEYTVDGLKLKSKYVAYYK 454
+D P +S + NN+K D+N + +DG S Y ++ K
Sbjct: 1141 SDPPCSSSNPANNKKYTDSNGNSDDMDGSSFSSFYSSFIK 1180
>AE014298-440|AAF45804.1| 1218|Drosophila melanogaster CG2647-PA
protein.
Length = 1218
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 335 TDAPATSGDDNNNRKVVDANEDEYTVDGLKLKSKYVAYYK 454
+D P +S + NN+K D+N + +DG S Y ++ K
Sbjct: 1135 SDPPCSSSNPANNKKYTDSNGNSDDMDGSSFSSFYSSFIK 1174
>AB029252-1|BAB15926.1| 143|Drosophila melanogaster period protein.
Length = 143
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 335 TDAPATSGDDNNNRKVVDANEDEYTVDGLKLKSKYVAYYK 454
+D P +S + NN+K D+N + +DG S Y ++ K
Sbjct: 66 SDPPCSSSNPANNKKYTDSNGNSDDMDGSSFSSFYSSFIK 105
>AB029251-1|BAB15925.1| 143|Drosophila melanogaster period protein.
Length = 143
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 335 TDAPATSGDDNNNRKVVDANEDEYTVDGLKLKSKYVAYYK 454
+D P +S + NN+K D+N + +DG S Y ++ K
Sbjct: 66 SDPPCSSSNPANNKKYTDSNGNSDDMDGSSFSSFYPSFIK 105
>AB029250-1|BAB15924.1| 143|Drosophila melanogaster period protein.
Length = 143
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 335 TDAPATSGDDNNNRKVVDANEDEYTVDGLKLKSKYVAYYK 454
+D P +S + NN+K D+N + +DG S Y ++ K
Sbjct: 66 SDPPCSSSNPANNKKYTDSNGNSDDMDGSSFSSFYSSFIK 105
>AE014134-2809|AAF53588.1| 1441|Drosophila melanogaster CG15134-PA
protein.
Length = 1441
Score = 30.7 bits (66), Expect = 1.9
Identities = 28/86 (32%), Positives = 43/86 (50%)
Frame = -1
Query: 321 IISDSIFKVSKGLMAFIKSSFCSGVVNGKSIEKLSSSVHSSGTLFRRNVTFLGSFSSGIK 142
I+ DSI K+ + F C GV+ + I K S++ SS F N++ +G+F S I+
Sbjct: 748 IMQDSI-KLLDAHLIFEPLLTCLGVMPQQMINKFSNADISSLENFGTNLSLIGTFDS-IR 805
Query: 141 SALILLELSDIMVVACKFNKLIKD*N 64
+++ E D A K KL K N
Sbjct: 806 VDIVVSEAGDKKNSAQKPAKLNKKSN 831
>AY525769-1|AAS48651.1| 1407|Drosophila melanogaster ADAM
metalloprotease protein.
Length = 1407
Score = 30.3 bits (65), Expect = 2.5
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Frame = +2
Query: 374 RKVVDANEDEYTVDGLKLKSKYVAYYKCLKILVDFLVMYVSKETNMKEYEQ----VYTLG 541
RK A++ + G +KY +Y + L I+VD V Y + + N K+ Q + +
Sbjct: 245 RKRRQADDSSQLIRGPYNANKYSSYVE-LVIVVDNKV-YKNFQENTKKVHQYCKGIANII 302
Query: 542 RQLYEVLRSIFVDEPFKLWLERNTHEFDNNTDKNFRNF 655
LY L +W E N EF ++ D RNF
Sbjct: 303 NALYVPLNIFVALVGVVIWNESNEIEFSSDGDLTLRNF 340
>AE014297-1887|AAZ83996.1| 959|Drosophila melanogaster CG7649-PA,
isoform A protein.
Length = 959
Score = 30.3 bits (65), Expect = 2.5
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Frame = +2
Query: 374 RKVVDANEDEYTVDGLKLKSKYVAYYKCLKILVDFLVMYVSKETNMKEYEQ----VYTLG 541
RK A++ + G +KY +Y + L I+VD V Y + + N K+ Q + +
Sbjct: 229 RKRRQADDSSQLIRGPYNANKYSSYVE-LVIVVDNKV-YKNFQENTKKVHQYCKGIANII 286
Query: 542 RQLYEVLRSIFVDEPFKLWLERNTHEFDNNTDKNFRNF 655
LY L +W E N EF ++ D RNF
Sbjct: 287 NALYVPLNIFVALVGVVIWNESNEIEFSSDGDLTLRNF 324
>AE014297-1886|AAZ83995.1| 1407|Drosophila melanogaster CG7649-PB,
isoform B protein.
Length = 1407
Score = 30.3 bits (65), Expect = 2.5
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Frame = +2
Query: 374 RKVVDANEDEYTVDGLKLKSKYVAYYKCLKILVDFLVMYVSKETNMKEYEQ----VYTLG 541
RK A++ + G +KY +Y + L I+VD V Y + + N K+ Q + +
Sbjct: 245 RKRRQADDSSQLIRGPYNANKYSSYVE-LVIVVDNKV-YKNFQENTKKVHQYCKGIANII 302
Query: 542 RQLYEVLRSIFVDEPFKLWLERNTHEFDNNTDKNFRNF 655
LY L +W E N EF ++ D RNF
Sbjct: 303 NALYVPLNIFVALVGVVIWNESNEIEFSSDGDLTLRNF 340
>AY122110-1|AAM52622.1| 590|Drosophila melanogaster GH12419p
protein.
Length = 590
Score = 29.5 bits (63), Expect = 4.5
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +2
Query: 35 KMKINLCNIQFQSLINLLNLQATTIMSLNSNKIKADLIPDENDPKNVTLRLNSVPEE 205
K ++ CN+ +S LN + T S++S + A L+P DP +P+E
Sbjct: 168 KPAVSKCNLHSRSFAKSLN-ELCTDTSVSSTHVPAPLLPSAADPLPAPALFADLPQE 223
>AE014298-3087|AAZ52506.1| 590|Drosophila melanogaster CG11566-PA
protein.
Length = 590
Score = 29.5 bits (63), Expect = 4.5
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +2
Query: 35 KMKINLCNIQFQSLINLLNLQATTIMSLNSNKIKADLIPDENDPKNVTLRLNSVPEE 205
K ++ CN+ +S LN + T S++S + A L+P DP +P+E
Sbjct: 168 KPAVSKCNLHSRSFAKSLN-ELCTDTSVSSTHVPAPLLPSAADPLPAPALFADLPQE 223
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,842,900
Number of Sequences: 53049
Number of extensions: 594523
Number of successful extensions: 2188
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2188
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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