Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc25h15
         (639 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70686-10|CAD21656.1|  533|Caenorhabditis elegans Hypothetical p...    93   2e-19
Z70683-8|CAD21626.1|  533|Caenorhabditis elegans Hypothetical pr...    93   2e-19
Z47808-2|CAA87770.1|  415|Caenorhabditis elegans Hypothetical pr...    31   0.53 
U39742-2|AAM51521.1|  321|Caenorhabditis elegans Hypothetical pr...    31   0.70 
U39742-1|AAK39198.1|  322|Caenorhabditis elegans Hypothetical pr...    31   0.70 
Z81484-11|CAB03969.2|  365|Caenorhabditis elegans Hypothetical p...    30   1.2  
AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical...    30   1.6  

>Z70686-10|CAD21656.1|  533|Caenorhabditis elegans Hypothetical
           protein F13B12.6 protein.
          Length = 533

 Score = 92.7 bits (220), Expect = 2e-19
 Identities = 45/92 (48%), Positives = 60/92 (65%)
 Frame = +2

Query: 242 VKMLQRILRDMWVDPEILAELDETQKQTLFCKMREEQVRRWQAWDDKISKDDIQPKFQKN 421
           + +L  IL    VD E+LA LD+ QKQ LFC+MR EQVR+W+A +    K    P  +K 
Sbjct: 1   MSILSEILTTGHVDEELLAALDDDQKQLLFCQMRSEQVRKWEAAEADFEKTG--PMNRKQ 58

Query: 422 GKKQVQFLKGEDGEPWVWVMGEHPDDKSIESI 517
            KK +++L G DGE WVWVMG+H  DK+I+ I
Sbjct: 59  KKKGLRWLTGVDGEVWVWVMGDHEKDKTIDEI 90


>Z70683-8|CAD21626.1|  533|Caenorhabditis elegans Hypothetical
           protein F13B12.6 protein.
          Length = 533

 Score = 92.7 bits (220), Expect = 2e-19
 Identities = 45/92 (48%), Positives = 60/92 (65%)
 Frame = +2

Query: 242 VKMLQRILRDMWVDPEILAELDETQKQTLFCKMREEQVRRWQAWDDKISKDDIQPKFQKN 421
           + +L  IL    VD E+LA LD+ QKQ LFC+MR EQVR+W+A +    K    P  +K 
Sbjct: 1   MSILSEILTTGHVDEELLAALDDDQKQLLFCQMRSEQVRKWEAAEADFEKTG--PMNRKQ 58

Query: 422 GKKQVQFLKGEDGEPWVWVMGEHPDDKSIESI 517
            KK +++L G DGE WVWVMG+H  DK+I+ I
Sbjct: 59  KKKGLRWLTGVDGEVWVWVMGDHEKDKTIDEI 90


>Z47808-2|CAA87770.1|  415|Caenorhabditis elegans Hypothetical
           protein D2013.2 protein.
          Length = 415

 Score = 31.5 bits (68), Expect = 0.53
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = -1

Query: 432 CFFPFFWNLGWMSSLLILSSQACHLRTCSSRILQKSVCFWVS 307
           C  PFFWNL  M    ++  +  H RTC S +       W +
Sbjct: 295 CNQPFFWNLQAMWQRKVVGLRQHHCRTCGSAVCGSCCDNWTT 336


>U39742-2|AAM51521.1|  321|Caenorhabditis elegans Hypothetical
           protein C25F6.7b protein.
          Length = 321

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 267 ATCGWIPRSWPNSTRPRNKRSS 332
           + CGW+P    N  RP+ KRSS
Sbjct: 53  SNCGWVPMEGGNFDRPKEKRSS 74


>U39742-1|AAK39198.1|  322|Caenorhabditis elegans Hypothetical
           protein C25F6.7a protein.
          Length = 322

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 267 ATCGWIPRSWPNSTRPRNKRSS 332
           + CGW+P    N  RP+ KRSS
Sbjct: 54  SNCGWVPMEGGNFDRPKEKRSS 75


>Z81484-11|CAB03969.2|  365|Caenorhabditis elegans Hypothetical
           protein C47A10.4 protein.
          Length = 365

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = -3

Query: 499 VVWMFTHNPNPWFSVFSF 446
           VVW+FT+N N  FSVF F
Sbjct: 31  VVWVFTYNSNREFSVFEF 48


>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
            protein Y45F10B.10 protein.
          Length = 1592

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -1

Query: 345  SRILQKSVCFWVSSSSARISGSTHMSRKILCSILTA 238
            S    K+V  WV S S      TH + K+ C+ILT+
Sbjct: 928  STSFDKTVNVWVFSQSTPTMSLTHHTAKVTCAILTS 963


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,321,410
Number of Sequences: 27780
Number of extensions: 271305
Number of successful extensions: 774
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 772
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)