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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc25h07
         (662 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1358 - 26372559-26372887,26373183-26373262,26373287-263734...   117   1e-26
04_03_0156 - 11963580-11963914,11964422-11964517,11964618-119646...    91   1e-24
09_01_0014 + 357398-357583,360213-360323,360520-360676,361067-36...    80   2e-15
06_03_0852 - 25371461-25371783,25372080-25372159,25372472-253725...    49   3e-06
01_05_0146 + 18591235-18591345,18591662-18591830,18592282-185923...    38   0.009
02_05_1197 - 34908382-34908582,34908664-34908837,34909239-349093...    31   1.1  
08_02_0174 + 13769487-13770352,13770357-13770408,13770438-137707...    30   1.4  
05_01_0094 - 627259-628236,628609-628689                               25   2.4  
10_07_0103 - 12886489-12886584,12887952-12888086                       29   2.5  
05_01_0339 + 2673862-2675637                                           29   2.5  
03_06_0108 + 31708713-31709079,31709258-31709822,31709933-317100...    29   3.3  
01_02_0048 - 10626467-10627498,10628522-10628617                       29   3.3  
11_06_0152 + 20669949-20670326,20670887-20670997,20671079-206712...    29   4.4  
11_03_0093 - 9852075-9852871,9852911-9853009,9853208-9853646,985...    29   4.4  
06_03_0980 + 26520832-26520922,26521021-26521409,26521612-265219...    29   4.4  
05_01_0405 - 3191639-3192059,3192107-3192234,3192312-3192440,319...    29   4.4  
12_02_0785 + 23135764-23135973,23136061-23136713,23136822-231369...    28   5.8  
11_01_0318 - 2373511-2375073                                           28   5.8  
06_01_0211 + 1604799-1605037,1605420-1605575,1605972-1606043,160...    28   5.8  
11_04_0182 - 14597325-14597881,14598082-14598243,14598416-14598950     28   7.6  
09_06_0007 + 20155697-20156107                                         28   7.6  
05_06_0132 + 25893241-25893435,25894266-25894487,25894567-258948...    28   7.6  
05_01_0210 + 1583176-1584177                                           28   7.6  
03_02_0679 + 10350238-10350693                                         28   7.6  
02_05_0583 + 30128795-30129158,30129342-30129505,30129602-301296...    28   7.6  
01_05_0145 + 18588201-18588242,18588925-18589044,18589201-185894...    28   7.6  

>08_02_1358 -
           26372559-26372887,26373183-26373262,26373287-26373420,
           26373546-26373689,26373809-26373919,26374165-26374305,
           26376839-26376964,26377072-26377263
          Length = 418

 Score =  117 bits (281), Expect = 1e-26
 Identities = 71/196 (36%), Positives = 105/196 (53%), Gaps = 7/196 (3%)
 Frame = +3

Query: 84  GYQCEEHNVVTEDGFVLTVFRVSSGQ-------RCSRTQIPVLLVHGLLQSADSWLDAGP 242
           GY CEEH V T+DG++L + R+  G+         +  + PVLL HG+L    +WL   P
Sbjct: 57  GYPCEEHEVTTQDGYILGLQRIPRGRIGGVTGGGAAAARQPVLLQHGVLVDGMTWLLGSP 116

Query: 243 GSGLAYLLADACHDVWLSNTRGNYYSRRHLTLDPDSDAAYWNFSADEIGYFDLPAILDYV 422
              L Y+LAD   DVW++N RG  +S RH++LDP S  +YWN+S D+I   D+PAI+DYV
Sbjct: 117 EESLPYILADQGFDVWIANNRGTRWSSRHVSLDPKS-RSYWNWSWDDIVVNDMPAIVDYV 175

Query: 423 LNRSRADILNYVGFSQGAGTFFIMCSERPNYCEKIKLMIALAPATRQTNTKSTMYRRLTQ 602
            + +     +YVG S G        SE     +K+K    L+P    ++  + +   L +
Sbjct: 176 CSHT-GQKPHYVGHSMGTLVALAAFSE-GRMVDKLKSAALLSPVAYLSHITTPIGVVLAK 233

Query: 603 AVQGWETLLTTAGLHE 650
           A  G E +    G+ E
Sbjct: 234 AFAG-ELISDLLGIAE 248


>04_03_0156 -
           11963580-11963914,11964422-11964517,11964618-11964697,
           11965250-11965290,11965402-11965548,11965922-11966035,
           11968842-11968961,11969491-11969631,11969892-11970014,
           11970357-11970566
          Length = 468

 Score = 91.1 bits (216), Expect(2) = 1e-24
 Identities = 42/99 (42%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
 Frame = +3

Query: 84  GYQCEEHNVVTEDGFVLTVFRVSSGQRCSRT------QIPVLLVHGLLQSADSWLDAGPG 245
           GY CEEH V TEDG++L++ R+ SG+  +        ++PVLL HGL+    +WL   P 
Sbjct: 63  GYACEEHTVTTEDGYILSLQRIPSGRGETAAGGGGGGKVPVLLQHGLMMDGVTWLMNSPN 122

Query: 246 SGLAYLLADACHDVWLSNTRGNYYSRRHLTLDPDSDAAY 362
             L Y+LAD  +DVW++N+RG  YSR H +L       Y
Sbjct: 123 ESLGYILADNGYDVWIANSRGTVYSRHHTSLVSSDSVIY 161



 Score = 39.9 bits (89), Expect(2) = 1e-24
 Identities = 17/39 (43%), Positives = 26/39 (66%)
 Frame = +3

Query: 357 AYWNFSADEIGYFDLPAILDYVLNRSRADILNYVGFSQG 473
           AYWN+S DE+   DL A++ YV +++    ++YVG S G
Sbjct: 199 AYWNWSWDELSSKDLSAVVQYVYSQAGQQKMHYVGHSLG 237


>09_01_0014 +
           357398-357583,360213-360323,360520-360676,361067-361233,
           362012-362122,362206-362349,362436-362476,364134-364174,
           364175-364261,365402-365724
          Length = 455

 Score = 79.8 bits (188), Expect = 2e-15
 Identities = 39/99 (39%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
 Frame = +3

Query: 84  GYQCEEHNVVTEDGFVLTVFRVSSGQR--CSRTQIPVLLVHGLLQSADSWLDAGPGSGLA 257
           GY C EHNV T+DGF+L++  +  G+      T  PV L HGL Q  D+W        L 
Sbjct: 55  GYPCTEHNVETKDGFLLSLQHIPHGKNKAADSTGPPVFLQHGLFQGGDTWFINSAEQSLG 114

Query: 258 YLLADACHDVWLSNTRGNYYSRRHLTLDPDS--DAAYWN 368
           Y+LAD   DVW+ N RG  +S+ H T       +  +WN
Sbjct: 115 YILADNGFDVWIGNVRGTRWSKGHSTFSVHDKVNTLHWN 153



 Score = 39.1 bits (87), Expect = 0.003
 Identities = 26/98 (26%), Positives = 46/98 (46%)
 Frame = +3

Query: 360 YWNFSADEIGYFDLPAILDYVLNRSRADILNYVGFSQGAGTFFIMCSERPNYCEKIKLMI 539
           +W++S  E+  +DL A+L YV   +++ IL YVG SQG     +     P   + I    
Sbjct: 209 FWDWSWQELAEYDLLAMLGYVYTVTQSKIL-YVGHSQGT-IMGLAALTMPEIVKMISSAA 266

Query: 540 ALAPATRQTNTKSTMYRRLTQAVQGWETLLTTAGLHEI 653
            L P +   +  ++    L       + +L T G+H++
Sbjct: 267 LLCPISYLDHVSASFV--LRAVAMHLDQMLVTMGIHQL 302


>06_03_0852 -
           25371461-25371783,25372080-25372159,25372472-25372554,
           25372597-25372740,25372836-25372946,25373238-25373354,
           25373436-25373562,25374160-25374296
          Length = 373

 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
 Frame = +3

Query: 42  PDSLLNVTELATRHGYQCEEHNVVTEDGFVLTVFRVSSGQRCSRTQI----PVLLVHGLL 209
           P  L      A   GY CEE+ V TEDG++L++ R+  G   S T      PVLL HGL+
Sbjct: 67  PHPLSMCQSRAAAFGYPCEEYKVTTEDGYILSLKRIPHGPHDSNTSTEMRPPVLLFHGLM 126

Query: 210 QSADSW 227
            +   W
Sbjct: 127 VAYWEW 132



 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 22/78 (28%), Positives = 40/78 (51%)
 Frame = +3

Query: 357 AYWNFSADEIGYFDLPAILDYVLNRSRADILNYVGFSQGAGTFFIMCSERPNYCEKIKLM 536
           AYW +S DE+  +DLPA+L +  + +  + ++Y+G S G        SE     + ++  
Sbjct: 128 AYWEWSWDELASYDLPAVLQFAYDHT-GEKIHYIGHSLGTLMILAAFSEH-KLLDVVRSA 185

Query: 537 IALAPATRQTNTKSTMYR 590
           + L P    + TKS + +
Sbjct: 186 VLLCPIAYLSRTKSKLLK 203


>01_05_0146 +
           18591235-18591345,18591662-18591830,18592282-18592334,
           18592369-18592487,18592618-18593698
          Length = 510

 Score = 37.5 bits (83), Expect = 0.009
 Identities = 21/54 (38%), Positives = 32/54 (59%)
 Frame = +3

Query: 261 LLADACHDVWLSNTRGNYYSRRHLTLDPDSDAAYWNFSADEIGYFDLPAILDYV 422
           L  +A +DV+L N RG   SR H+  +  S   YW +S +E G  D+PAI++ +
Sbjct: 121 LWVNAGYDVFLGNLRG-LVSREHVDKNISS-YKYWKYSVNEHGTKDMPAIVEEI 172


>02_05_1197 -
           34908382-34908582,34908664-34908837,34909239-34909337,
           34909444-34909644,34910229-34910336,34910498-34910882,
           34911132-34911584,34911868-34912094,34912211-34912270
          Length = 635

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
 Frame = +3

Query: 117 EDGFVLT--VFRVSSGQRCSRTQIPVLLVHGLLQSADSWLDAGPGSGLAYLLADACHDVW 290
           +D  +LT  VF + S         P     G++ +A   L AGP   L Y L  A H  W
Sbjct: 97  DDQIILTALVFYLVSATMPQAQVAPWWSTKGMVVTAV--LHAGPVEFLYYWLHRALHHHW 154

Query: 291 LSNTRGNYYSRRHLTLDPDSDAAYWNFSADEIGYFDLPAI 410
           L      Y+S  H ++  +   +  +  A+E+ YF L AI
Sbjct: 155 L---YARYHSHHHASIVTEPITSVIHPFAEEVVYFVLLAI 191


>08_02_0174 +
           13769487-13770352,13770357-13770408,13770438-13770705,
           13770745-13771022,13771049-13771486
          Length = 633

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +3

Query: 6   IRNETKRQLGYPPDSLLNVTELATRHG 86
           + NET+R LG P  SL NV  + TR G
Sbjct: 370 LANETRRILGQPDSSLENVKAITTRGG 396


>05_01_0094 - 627259-628236,628609-628689
          Length = 352

 Score = 25.0 bits (52), Expect(2) = 2.4
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +1

Query: 232 TRGPAPASPTCWQTLATTCGSPTLAATITRGATSLSI 342
           T G  PA  T   T ++TC +P   A       +LSI
Sbjct: 175 TAGSTPAGSTTTTTTSSTCATPNAPALPAMLGGNLSI 211



 Score = 23.0 bits (47), Expect(2) = 2.4
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +1

Query: 208 CRALTRGWTRGPA 246
           CRA  R WTRG A
Sbjct: 129 CRACRRYWTRGGA 141


>10_07_0103 - 12886489-12886584,12887952-12888086
          Length = 76

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +3

Query: 171 RTQIPVLLVHGLLQSADSWLDAGPGSGLAYL 263
           R  +P+LLV     +AD   DAG G+G+ +L
Sbjct: 9   RLAVPLLLVLAAAAAADGVADAGAGAGMTHL 39


>05_01_0339 + 2673862-2675637
          Length = 591

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
 Frame = +3

Query: 201 GLLQSADSWLDAGPGSGLAYL---LADACHDVWLSNTRGNYYSRRHLTLDPDSDAAY 362
           GLL  A S+++ GP +  A L   L  AC     S   G Y + + L LDP   AAY
Sbjct: 475 GLLDDAKSFIEDGPFTDNALLWQALMGACSFHGNSEV-GKYAAEKLLLLDPSCTAAY 530


>03_06_0108 +
           31708713-31709079,31709258-31709822,31709933-31710015,
           31710231-31710319,31710486-31710559,31710654-31710704,
           31710807-31710883,31711454-31712031,31712388-31712555,
           31713364-31713417,31713456-31713467,31713554-31713715
          Length = 759

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = -1

Query: 314 IVAASVGEPHVVASVCQQVGEAGAGPRVQPRVSALQQTVHEQHWDLCTRA--PLAARHAE 141
           I+ +S   P  +A    +VG+ G    V    +AL Q  +   W + T A  P AAR  +
Sbjct: 471 ILESSTLLPGELARRKGKVGDGGGAAAVADAAAALVQAGNVAEWKMATAAALPAAARTEQ 530

Query: 140 NGQH 129
             QH
Sbjct: 531 QQQH 534


>01_02_0048 - 10626467-10627498,10628522-10628617
          Length = 375

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 23/74 (31%), Positives = 28/74 (37%), Gaps = 5/74 (6%)
 Frame = +1

Query: 136 PFSACRAANGARVHRSQCCS---CTVC--CRALTRGWTRGPAPASPTCWQTLATTCGSPT 300
           P + CR  N A  HR    S     VC  C A   GW     P +P      ATT G   
Sbjct: 116 PVATCRLCNEAVAHRYCLQSDDDTFVCAACVAAAHGWRFSYTPTAPPPAALAATTTGGVV 175

Query: 301 LAATITRGATSLSI 342
             A +   AT + +
Sbjct: 176 SDAPLDIRATRIML 189


>11_06_0152 +
           20669949-20670326,20670887-20670997,20671079-20671280,
           20671393-20671675,20672145-20672234,20672366-20672473,
           20672595-20672975,20673250-20673324,20673685-20673797,
           20676233-20676742,20676807-20677300
          Length = 914

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 536 DSFGSGDETDEYEINDVSKADSSS 607
           D+F SGDE DE  + ++ +AD SS
Sbjct: 68  DAFSSGDEIDEDAVVELGEADPSS 91


>11_03_0093 -
           9852075-9852871,9852911-9853009,9853208-9853646,
           9853803-9854129
          Length = 553

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +3

Query: 12  NETKRQLGYPPDSLLNVTELATRHG 86
           NET+R LG P  S+ NV  + TR G
Sbjct: 265 NETRRILGQPDSSVENVKAITTRGG 289


>06_03_0980 +
           26520832-26520922,26521021-26521409,26521612-26521927,
           26522869-26523769,26524103-26524184
          Length = 592

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 241 PAPASPTCWQTLATTCGSPTLAATITRGATSLS 339
           PAP S    QT A+  G P + A +  GATS++
Sbjct: 111 PAPESDAPAQTFASEDGVPNVRARVLGGATSIN 143


>05_01_0405 -
           3191639-3192059,3192107-3192234,3192312-3192440,
           3193538-3193616,3193716-3193879,3193968-3194153,
           3194258-3194389,3194484-3194575,3195054-3195150,
           3195258-3195485
          Length = 551

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 12/39 (30%), Positives = 24/39 (61%)
 Frame = -1

Query: 236 RVQPRVSALQQTVHEQHWDLCTRAPLAARHAENGQHESV 120
           +V+P +SALQ+ +H Q  ++ T A  A  +  +G ++ +
Sbjct: 245 QVKPALSALQRLIHSQDEEVLTDACWALSYLSDGTNDKI 283


>12_02_0785 +
           23135764-23135973,23136061-23136713,23136822-23136903,
           23137031-23137113,23137229-23137361,23137493-23137664,
           23137929-23138656
          Length = 686

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
 Frame = +3

Query: 288 WLSNTRGNYYSRRHLTL-DPDSDAAYWNFSADEIGYFDLPAILDYVLNRSRADILNYVGF 464
           WL      +Y+     + D   D   +    D  G+ +  A L++ +++   +I   +GF
Sbjct: 521 WLVAPNSIFYAEHDWKIADAPFDPLQYQQQTD--GFEESYAYLEHAISQM-GNIDGILGF 577

Query: 465 SQGAGTFFIMCSERPNYCEKIKLMIAL 545
           SQGA    + C ++   C  +K    +
Sbjct: 578 SQGAAMAALFCRQQQKTCGSLKFRFGI 604


>11_01_0318 - 2373511-2375073
          Length = 520

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
 Frame = +1

Query: 139 FSACRAANGARV---HRSQCCSCTVCCRALTRGWTR 237
           FS C AA G  +    R   CSC VC   LT  W R
Sbjct: 27  FSVCLAALGVVLLVARRWPWCSCHVCRAYLTGSWAR 62


>06_01_0211 +
           1604799-1605037,1605420-1605575,1605972-1606043,
           1606325-1606396,1606608-1606679,1606777-1606848,
           1606936-1607007,1607092-1607160,1607278-1607349,
           1607630-1607701,1607786-1607857,1607940-1608011,
           1608100-1608171,1608286-1608357,1608449-1608520,
           1608633-1608704,1608801-1608872,1608962-1609033,
           1609120-1609191,1609283-1609353,1609439-1609570,
           1609676-1610014,1610097-1610467,1610599-1610928,
           1611115-1611150
          Length = 964

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +3

Query: 498 SERPNYCEKIKLMIALAPATRQTNTKSTMYRRL 596
           S+RP   E  +++++L PA+  T  K+  Y RL
Sbjct: 887 SDRPTMHEVARVLLSLLPASAMTTPKTVDYSRL 919


>11_04_0182 - 14597325-14597881,14598082-14598243,14598416-14598950
          Length = 417

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = +3

Query: 12  NETKRQLGYPPDSLLNVTELATRHGYQCEEH-NVVTEDGFVLTVFRVSSGQRCSRTQIP 185
           NE+ R LG P  S+ NV  + TR G   + H   +        +  +S G  C++  +P
Sbjct: 209 NESGRILGQPEPSVENVKAITTRGGNPEDPHQRAIIGRNASAHLRTLSKGHPCNKRPLP 267


>09_06_0007 + 20155697-20156107
          Length = 136

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 233 VQPRVSALQQTVHEQHWDLCTRAPL 159
           +QPR SA   TVH  +W   + +PL
Sbjct: 39  LQPRGSAYTLTVHRYYWSAISHSPL 63


>05_06_0132 +
           25893241-25893435,25894266-25894487,25894567-25894863,
           25894944-25895111,25895201-25895368,25895456-25895536,
           25895704-25895770,25895874-25895971,25896587-25896659,
           25896753-25896823,25896919-25896968,25897698-25897810,
           25898182-25898300,25898629-25898721,25899025-25899051,
           25899422-25899823,25900467-25900513,25900612-25900651,
           25900733-25900795,25900881-25901018,25901873-25902031,
           25902111-25902164,25902324-25902392,25902514-25902643,
           25902909-25902949,25903133-25903178,25903200-25903357,
           25903560-25903605,25903702-25903853,25904022-25904243
          Length = 1202

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 87  YQCEEHNVVTEDGFVLTVFRVSSGQRCSRTQIPVLLVHGLLQSADSWLDAGPGSGL 254
           Y C+  +  T    +   F V  G R  +T + V ++  L+    S+   GPG G+
Sbjct: 343 YHCQADSTSTH---IALAFEVPGGWRQEKTAMIVTVLQVLMGGGGSFSTGGPGKGM 395


>05_01_0210 + 1583176-1584177
          Length = 333

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +2

Query: 524 DQTHDSFGSGDETDEYEIN-DVSKADSSSAG 613
           D  HD  G GDE DE E +  V + D  ++G
Sbjct: 182 DDDHDGGGDGDEDDEEEADQQVDEEDDGASG 212


>03_02_0679 + 10350238-10350693
          Length = 151

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +3

Query: 165 CSRTQIPVLLVHGLLQSADSWLDAGPGSGLAYLLAD 272
           CS + +P++L+  LL  A     A PG GLA  LAD
Sbjct: 3   CSGSFLPIMLLPLLLAGAAVAGGAPPGLGLAQRLAD 38


>02_05_0583 +
           30128795-30129158,30129342-30129505,30129602-30129665,
           30130082-30130215,30130369-30130452,30130580-30130654,
           30130734-30130805,30130892-30130965,30131217-30131269,
           30131388-30131497,30131824-30131892,30131975-30132049,
           30132449-30132508,30132555-30132647,30132718-30132797,
           30132877-30132976,30133153-30133590
          Length = 702

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 19/65 (29%), Positives = 29/65 (44%)
 Frame = +3

Query: 414 DYVLNRSRADILNYVGFSQGAGTFFIMCSERPNYCEKIKLMIALAPATRQTNTKSTMYRR 593
           DYV N+ + DI++Y G++      FI         E ++      P   +TNT  T  R 
Sbjct: 217 DYV-NQLKTDIMSYYGYNDFLVEAFIEMFPAVELVELLESFEKRPPECLRTNTLKTRRRD 275

Query: 594 LTQAV 608
           L  A+
Sbjct: 276 LAAAL 280


>01_05_0145 +
           18588201-18588242,18588925-18589044,18589201-18589457,
           18589980-18590048,18590091-18590115
          Length = 170

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +3

Query: 66  ELATRHGYQCEEHNVVTEDGFVLTVFRVSS 155
           ++ T  GY  E   VVT DG+VL + R+ S
Sbjct: 134 DVITELGYPFEAIKVVTSDGYVLLLERIPS 163


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,638,925
Number of Sequences: 37544
Number of extensions: 377469
Number of successful extensions: 1553
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1547
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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