Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc25h06
         (104 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089676-1|AAL90414.1|  168|Drosophila melanogaster RH48056p pro...    43   7e-05
AY071577-1|AAL49199.1|  162|Drosophila melanogaster RE63456p pro...    43   7e-05
AE014297-3917|AAN14070.1|  162|Drosophila melanogaster CG6090-PB...    43   7e-05
AE014297-3916|AAF56564.2|  162|Drosophila melanogaster CG6090-PA...    43   7e-05
AE014297-925|AAN13422.1|  168|Drosophila melanogaster CG9354-PB,...    43   7e-05
AE014297-924|AAF54369.1|  168|Drosophila melanogaster CG9354-PA,...    43   7e-05

>AY089676-1|AAL90414.1|  168|Drosophila melanogaster RH48056p
           protein.
          Length = 168

 Score = 42.7 bits (96), Expect = 7e-05
 Identities = 19/22 (86%), Positives = 21/22 (95%)
 Frame = +1

Query: 37  MVQRLTFRRRLSYNTKSNQRRI 102
           MVQRLT RRRLSYNT+SN+RRI
Sbjct: 1   MVQRLTLRRRLSYNTRSNKRRI 22


>AY071577-1|AAL49199.1|  162|Drosophila melanogaster RE63456p
           protein.
          Length = 162

 Score = 42.7 bits (96), Expect = 7e-05
 Identities = 19/22 (86%), Positives = 21/22 (95%)
 Frame = +1

Query: 37  MVQRLTFRRRLSYNTKSNQRRI 102
           MVQRLT RRRLSYNT+SN+RRI
Sbjct: 1   MVQRLTLRRRLSYNTRSNKRRI 22


>AE014297-3917|AAN14070.1|  162|Drosophila melanogaster CG6090-PB,
           isoform B protein.
          Length = 162

 Score = 42.7 bits (96), Expect = 7e-05
 Identities = 19/22 (86%), Positives = 21/22 (95%)
 Frame = +1

Query: 37  MVQRLTFRRRLSYNTKSNQRRI 102
           MVQRLT RRRLSYNT+SN+RRI
Sbjct: 1   MVQRLTLRRRLSYNTRSNKRRI 22


>AE014297-3916|AAF56564.2|  162|Drosophila melanogaster CG6090-PA,
           isoform A protein.
          Length = 162

 Score = 42.7 bits (96), Expect = 7e-05
 Identities = 19/22 (86%), Positives = 21/22 (95%)
 Frame = +1

Query: 37  MVQRLTFRRRLSYNTKSNQRRI 102
           MVQRLT RRRLSYNT+SN+RRI
Sbjct: 1   MVQRLTLRRRLSYNTRSNKRRI 22


>AE014297-925|AAN13422.1|  168|Drosophila melanogaster CG9354-PB,
           isoform B protein.
          Length = 168

 Score = 42.7 bits (96), Expect = 7e-05
 Identities = 19/22 (86%), Positives = 21/22 (95%)
 Frame = +1

Query: 37  MVQRLTFRRRLSYNTKSNQRRI 102
           MVQRLT RRRLSYNT+SN+RRI
Sbjct: 1   MVQRLTLRRRLSYNTRSNKRRI 22


>AE014297-924|AAF54369.1|  168|Drosophila melanogaster CG9354-PA,
           isoform A protein.
          Length = 168

 Score = 42.7 bits (96), Expect = 7e-05
 Identities = 19/22 (86%), Positives = 21/22 (95%)
 Frame = +1

Query: 37  MVQRLTFRRRLSYNTKSNQRRI 102
           MVQRLT RRRLSYNT+SN+RRI
Sbjct: 1   MVQRLTLRRRLSYNTRSNKRRI 22


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,314,472
Number of Sequences: 53049
Number of extensions: 37390
Number of successful extensions: 130
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 130
length of database: 24,988,368
effective HSP length: 16
effective length of database: 24,139,584
effective search space used: 434512512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)