Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc25h02
(678 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal pr... 310 9e-85
AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA, i... 310 9e-85
Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal prot... 295 5e-80
AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p pro... 268 4e-72
AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB, i... 237 8e-63
AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD, i... 164 1e-40
AE013599-2921|AAF57537.1| 632|Drosophila melanogaster CG15904-P... 29 7.7
>AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal
protein S3a protein.
Length = 268
Score = 310 bits (762), Expect = 9e-85
Identities = 151/214 (70%), Positives = 174/214 (81%)
Frame = +1
Query: 37 GKIKACRRAVKKVLRRRCNVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGL 216
GK K + KK +++ VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ L
Sbjct: 4 GKNKGLSKGGKKGGKKKV-VDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYL 62
Query: 217 KGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 396
KGRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQT
Sbjct: 63 KGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQT 122
Query: 397 LIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNS 576
LIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ +
Sbjct: 123 LIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGA 182
Query: 577 ELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIR 678
+L+++VNKL DSIAKDIEK+C IYPL DV IR
Sbjct: 183 DLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIR 216
>AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA,
isoform A protein.
Length = 268
Score = 310 bits (762), Expect = 9e-85
Identities = 151/214 (70%), Positives = 174/214 (81%)
Frame = +1
Query: 37 GKIKACRRAVKKVLRRRCNVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGL 216
GK K + KK +++ VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ L
Sbjct: 4 GKNKGLSKGGKKGGKKKV-VDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYL 62
Query: 217 KGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 396
KGRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQT
Sbjct: 63 KGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQT 122
Query: 397 LIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNS 576
LIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ +
Sbjct: 123 LIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGA 182
Query: 577 ELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIR 678
+L+++VNKL DSIAKDIEK+C IYPL DV IR
Sbjct: 183 DLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIR 216
>Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal protein
S3a protein.
Length = 270
Score = 295 bits (723), Expect = 5e-80
Identities = 147/216 (68%), Positives = 170/216 (78%), Gaps = 2/216 (0%)
Frame = +1
Query: 37 GKIKACRRAVKKVLRRRCNVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGL 216
GK K + KK +++ VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+
Sbjct: 4 GKNKGLSKGGKKGGKKKV-VDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYF 62
Query: 217 KGRVFEVSLA-DLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 393
KGRVFEVSL DLQ D D E SFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQ
Sbjct: 63 KGRVFEVSLVPDLQKDIDPEHSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQ 122
Query: 394 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRK-KMCEIITRDVT 570
TLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYA +QVR IR +M +IIT +V+
Sbjct: 123 TLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAHESQVRKIRSGRMTDIITNEVS 182
Query: 571 NSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIR 678
++L+++VNKL DSIAKDIEK+C IYPL DV IR
Sbjct: 183 GADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIR 218
>AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p
protein.
Length = 217
Score = 268 bits (658), Expect = 4e-72
Identities = 129/186 (69%), Positives = 152/186 (81%)
Frame = +1
Query: 37 GKIKACRRAVKKVLRRRCNVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGL 216
GK K + KK +++ VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ L
Sbjct: 4 GKNKGLSKGGKKGGKKKV-VDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYL 62
Query: 217 KGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 396
KGRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQT
Sbjct: 63 KGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQT 122
Query: 397 LIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNS 576
LIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ +
Sbjct: 123 LIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGA 182
Query: 577 ELREVV 594
+L++++
Sbjct: 183 DLKQLL 188
>AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB,
isoform B protein.
Length = 218
Score = 237 bits (581), Expect = 8e-63
Identities = 114/153 (74%), Positives = 128/153 (83%)
Frame = +1
Query: 220 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 399
GRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTL
Sbjct: 14 GRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTL 73
Query: 400 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 579
IEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++
Sbjct: 74 IEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGAD 133
Query: 580 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIR 678
L+++VNKL DSIAKDIEK+C IYPL DV IR
Sbjct: 134 LKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIR 166
>AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD,
isoform D protein.
Length = 163
Score = 164 bits (398), Expect = 1e-40
Identities = 77/111 (69%), Positives = 91/111 (81%)
Frame = +1
Query: 346 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 525
MDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR
Sbjct: 1 MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVR 60
Query: 526 AIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIR 678
IR +M +IIT +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IR
Sbjct: 61 KIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIR 111
>AE013599-2921|AAF57537.1| 632|Drosophila melanogaster CG15904-PA
protein.
Length = 632
Score = 28.7 bits (61), Expect = 7.7
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = -1
Query: 678 SDANIAQRVDAMAGLLDVLGNGVRNQLVHHLPEFRVSDVACNDFTHFLSDC 526
+ AN+ M LLD++ GV L+H E V + ++DC
Sbjct: 264 TSANVTADYLNMTNLLDLVSQGVYETLIHSFTEITTKFVVSYSYPIGINDC 314
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,849,390
Number of Sequences: 53049
Number of extensions: 693335
Number of successful extensions: 2124
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2122
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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