Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc25g05
(389 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49967-7|CAA90257.1| 740|Caenorhabditis elegans Hypothetical pr... 35 0.023
U42436-9|AAF99893.1| 109|Caenorhabditis elegans Hypothetical pr... 32 0.12
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 31 0.29
Z72512-4|CAA96666.1| 328|Caenorhabditis elegans Hypothetical pr... 31 0.38
U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical pr... 31 0.38
AF063007-6|AAC16427.2| 523|Caenorhabditis elegans Taf (tbp-asso... 29 1.2
Z99278-1|CAB16490.1| 793|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z70783-10|CAC70122.1| 1037|Caenorhabditis elegans Hypothetical p... 29 1.5
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr... 28 2.7
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p... 28 2.7
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein. 28 2.7
AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical ... 28 2.7
AC091125-6|AAK27886.3| 474|Caenorhabditis elegans Hypothetical ... 28 2.7
Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z70684-2|CAA94596.1| 268|Caenorhabditis elegans Hypothetical pr... 27 3.6
X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomera... 27 3.6
AC024792-2|AAF60680.2| 813|Caenorhabditis elegans Hypothetical ... 27 3.6
Z79754-5|CAB02094.2| 573|Caenorhabditis elegans Hypothetical pr... 27 4.7
U23454-2|AAC46519.2| 368|Caenorhabditis elegans Hypothetical pr... 27 4.7
L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans chrom... 27 4.7
AF039719-10|AAB96751.2| 568|Caenorhabditis elegans Hypothetical... 27 4.7
Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z81515-3|CAC42289.2| 1693|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z81515-2|CAB04197.2| 1691|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z81077-12|CAH19097.1| 316|Caenorhabditis elegans Hypothetical p... 27 6.2
Z72505-1|CAA96608.1| 338|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z50044-7|CAA90359.1| 1415|Caenorhabditis elegans Hypothetical pr... 27 6.2
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 27 6.2
AF038615-3|AAB94144.1| 328|Caenorhabditis elegans Hypothetical ... 27 6.2
AF035197-1|AAC17865.1| 1415|Caenorhabditis elegans ZYG-9 protein. 27 6.2
AC006665-2|AAF39904.1| 341|Caenorhabditis elegans Hypothetical ... 27 6.2
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 26 8.2
U41553-1|AAA83291.1| 1250|Caenorhabditis elegans Hypothetical pr... 26 8.2
U41036-1|AAA82384.1| 315|Caenorhabditis elegans Hypothetical pr... 26 8.2
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 26 8.2
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 26 8.2
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 26 8.2
AF040661-1|AAK82922.2| 508|Caenorhabditis elegans Hypothetical ... 26 8.2
>Z49967-7|CAA90257.1| 740|Caenorhabditis elegans Hypothetical
protein F54C9.9 protein.
Length = 740
Score = 34.7 bits (76), Expect = 0.023
Identities = 15/51 (29%), Positives = 30/51 (58%)
Frame = +2
Query: 2 VMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKR 154
V + ++++ +D G K K+ +ED + + E EM+ ++N D+E KK+
Sbjct: 589 VNKKKRILSIDFGGKKSLKRKMEDEQMEKEMAEMNDQNDNTEEDAEKKKKK 639
>U42436-9|AAF99893.1| 109|Caenorhabditis elegans Hypothetical
protein C49H3.3 protein.
Length = 109
Score = 32.3 bits (70), Expect = 0.12
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +2
Query: 47 KKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQYPVWL 208
K+ + +D EK D ++++E + V S+ NTKTLK ++G +P WL
Sbjct: 35 KRDEYEKQDAEKTKTDG--TANEEKMEVTSQA----TINTKTLKKKDGSFPAWL 82
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 31.1 bits (67), Expect = 0.29
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +2
Query: 8 ESEQVIFLDAGDLKKSKKVLED--IEKDNEDVEMSSDDENVVVDSE 139
E E+ DA +KKS V ED E+D E++EM +DE D E
Sbjct: 269 EEEEESDDDAPQVKKSVAVEEDEEDEEDEEEIEMDEEDEEEEEDEE 314
>Z72512-4|CAA96666.1| 328|Caenorhabditis elegans Hypothetical
protein R07B5.6 protein.
Length = 328
Score = 30.7 bits (66), Expect = 0.38
Identities = 12/37 (32%), Positives = 25/37 (67%)
Frame = -2
Query: 220 LTFVQPNRVLSVLIFQGFRIKNSFLAAFTIDHNVFII 110
LT++ P V+ + IF FR + + +A T++H++++I
Sbjct: 29 LTYMTPTIVVMLKIFMSFRGPSHWNSAHTMNHHIYVI 65
>U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical
protein F55F8.3 protein.
Length = 910
Score = 30.7 bits (66), Expect = 0.38
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +2
Query: 44 LKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEG 142
+++SKK ++ E++ EDV SDDE++ +S G
Sbjct: 864 IRQSKKSVKKEEEEEEDVSDESDDEDIEDESAG 896
>AF063007-6|AAC16427.2| 523|Caenorhabditis elegans Taf
(tbp-associated transcriptionfactor) family protein 4
protein.
Length = 523
Score = 29.1 bits (62), Expect = 1.2
Identities = 12/54 (22%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +2
Query: 41 DLKKSKKVLEDIEKDNEDVEMSSDDENVV---VDSEGGKKRVFNTKTLKDQNGQ 193
D+K+ + LED+++ E++ S + E+++ + GK+ + K ++ Q+ +
Sbjct: 393 DVKRQLRFLEDLDRQEEELRESREKESLIRMSKNKNSGKETIEKAKEMQRQDAE 446
>Z99278-1|CAB16490.1| 793|Caenorhabditis elegans Hypothetical
protein Y53C12B.1 protein.
Length = 793
Score = 28.7 bits (61), Expect = 1.5
Identities = 15/61 (24%), Positives = 33/61 (54%)
Frame = +2
Query: 2 VMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKD 181
+ + +I LD +LK +++++ ++ + D+ ++ V S + R++NTKTL
Sbjct: 294 ISAEQNLIILDFENLKIARQIVGFHDEIYSCCLLGKDESHMAVASNTSEIRLYNTKTLDC 353
Query: 182 Q 184
Q
Sbjct: 354 Q 354
>Z70783-10|CAC70122.1| 1037|Caenorhabditis elegans Hypothetical
protein ZK856.13 protein.
Length = 1037
Score = 28.7 bits (61), Expect = 1.5
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +2
Query: 68 EDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQYP 199
+D E+D+EDVE+ D E V G F + D+ P
Sbjct: 135 DDEEEDDEDVELMEDVEEVSTSQHAGSSYSFQSAGPSDRYDALP 178
>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical protein
C35C5.1 protein.
Length = 2962
Score = 27.9 bits (59), Expect = 2.7
Identities = 14/53 (26%), Positives = 29/53 (54%)
Frame = +2
Query: 44 LKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQYPV 202
L++++K+ +IEK+NE ++ + ++ E + + TLKD G P+
Sbjct: 1228 LREAEKLKAEIEKENER-KLQEERTRKALELERKIEEIKRVSTLKDMFGPLPI 1279
>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 27.9 bits (59), Expect = 2.7
Identities = 14/53 (26%), Positives = 29/53 (54%)
Frame = +2
Query: 44 LKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQYPV 202
L++++K+ +IEK+NE ++ + ++ E + + TLKD G P+
Sbjct: 1228 LREAEKLKAEIEKENER-KLQEERTRKALELERKIEEIKRVSTLKDMFGPLPI 1279
>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
Length = 2962
Score = 27.9 bits (59), Expect = 2.7
Identities = 14/53 (26%), Positives = 29/53 (54%)
Frame = +2
Query: 44 LKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQYPV 202
L++++K+ +IEK+NE ++ + ++ E + + TLKD G P+
Sbjct: 1228 LREAEKLKAEIEKENER-KLQEERTRKALELERKIEEIKRVSTLKDMFGPLPI 1279
>AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical
protein W09G12.7 protein.
Length = 368
Score = 27.9 bits (59), Expect = 2.7
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +2
Query: 41 DLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQN 187
D KKSKK + +KD+ D SSD + S+ GKK+ K+ KD +
Sbjct: 94 DDKKSKKKKKKSKKDSSDSSDSSDSSD---SSDDGKKKK-KKKSKKDSS 138
Score = 27.9 bits (59), Expect = 2.7
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +2
Query: 32 DAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTK 169
D G KK KK +D D+ D SSD + D + KK+ +K
Sbjct: 123 DDGKKKKKKKSKKDSSDDSSDSSDSSDSSDSSDDDKKKKKKSKKSK 168
>AC091125-6|AAK27886.3| 474|Caenorhabditis elegans Hypothetical
protein Y67D2.2 protein.
Length = 474
Score = 27.9 bits (59), Expect = 2.7
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 41 DLKKSKKVLEDIEKDNEDVEMSSDDENVVVDS 136
+LK S+++L + +N S DDE+VVV+S
Sbjct: 144 ELKSSRRILMNQSIENCHSSSSEDDEDVVVES 175
>Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical
protein M01E5.5a protein.
Length = 806
Score = 27.5 bits (58), Expect = 3.6
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 47 KKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTK 169
KK +K + +EK+N ++ D+++ D E KK+ +K
Sbjct: 170 KKERKEKKRLEKENRKIKEEDDEDSDDEDDEKAKKKKRKSK 210
>Z70684-2|CAA94596.1| 268|Caenorhabditis elegans Hypothetical
protein F28D1.2 protein.
Length = 268
Score = 27.5 bits (58), Expect = 3.6
Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 38 GDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGK-KRVFNTKTLKDQNGQ 193
G L+ KK++ D++K N+D+ + E + E + + F + D+ G+
Sbjct: 211 GQLEAQKKIIADLQKKNDDLMKEEEGEEDYEEEENYEVEEDFEDEEEYDEEGE 263
>X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomerase
protein.
Length = 806
Score = 27.5 bits (58), Expect = 3.6
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 47 KKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTK 169
KK +K + +EK+N ++ D+++ D E KK+ +K
Sbjct: 170 KKKRKEKKRLEKENRKIKEEDDEDSDDEDDEKAKKKKRKSK 210
>AC024792-2|AAF60680.2| 813|Caenorhabditis elegans Hypothetical
protein Y48G1A.4 protein.
Length = 813
Score = 27.5 bits (58), Expect = 3.6
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +2
Query: 32 DAGDLKKSKKVLEDIEKDNEDVEMSSDDE 118
D DL+ ++ L+D+ +D +++E SDDE
Sbjct: 331 DDEDLEDEEEDLDDLLEDEDELEEDSDDE 359
>Z79754-5|CAB02094.2| 573|Caenorhabditis elegans Hypothetical
protein F25H2.6 protein.
Length = 573
Score = 27.1 bits (57), Expect = 4.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +2
Query: 26 FLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVF 160
F DA + K + +EK E+VE + N+VV E KK F
Sbjct: 275 FFDADEFDVDSKNGDTVEKRQEEVE-DKKNGNIVVPEEEKKKTSF 318
>U23454-2|AAC46519.2| 368|Caenorhabditis elegans Hypothetical
protein C10A4.5 protein.
Length = 368
Score = 27.1 bits (57), Expect = 4.7
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = +2
Query: 29 LDAGDLKKSKKVLEDIEKDNEDVEMSSDDEN 121
++ + S+ ++ +K+++DVE SSD+EN
Sbjct: 334 IELQNTSSSQSETQEYDKEDKDVEESSDEEN 364
>L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans
chromodomain proteinprotein 1 protein.
Length = 304
Score = 27.1 bits (57), Expect = 4.7
Identities = 10/24 (41%), Positives = 19/24 (79%)
Frame = +2
Query: 41 DLKKSKKVLEDIEKDNEDVEMSSD 112
DLK+ +K+ ED +++ EDV++ S+
Sbjct: 184 DLKEDEKMEEDEKEEEEDVQLESE 207
>AF039719-10|AAB96751.2| 568|Caenorhabditis elegans Hypothetical
protein K04F10.2 protein.
Length = 568
Score = 27.1 bits (57), Expect = 4.7
Identities = 14/57 (24%), Positives = 31/57 (54%)
Frame = +2
Query: 41 DLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQYPVWLH 211
DLK+ +K E+I+ + + E++ +D+N + E + RV + L + + + L+
Sbjct: 5 DLKEIEKNAENIKLEPAEDEVNEEDQNEITIPELPEGRVLELRLLSNWGDSHYIGLN 61
>Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical
protein F26H11.2c protein.
Length = 2266
Score = 26.6 bits (56), Expect = 6.2
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Frame = +2
Query: 44 LKKSKKVLEDIEKDNEDVEMSSDD-----ENVVVDSEGGKKRVFNTKTLK--DQNGQYPV 202
LK+ ++ + +++D+E+ E SSDD E+ VV E + + + K K D+ +Y
Sbjct: 168 LKRQEEDIIYMDEDSEEEEESSDDEFMLNEDQVVQEEEEELNLTDIKIEKGLDEENKYCP 227
Query: 203 WL 208
WL
Sbjct: 228 WL 229
>Z81515-3|CAC42289.2| 1693|Caenorhabditis elegans Hypothetical
protein F26H11.2b protein.
Length = 1693
Score = 26.6 bits (56), Expect = 6.2
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Frame = +2
Query: 44 LKKSKKVLEDIEKDNEDVEMSSDD-----ENVVVDSEGGKKRVFNTKTLK--DQNGQYPV 202
LK+ ++ + +++D+E+ E SSDD E+ VV E + + + K K D+ +Y
Sbjct: 168 LKRQEEDIIYMDEDSEEEEESSDDEFMLNEDQVVQEEEEELNLTDIKIEKGLDEENKYCP 227
Query: 203 WL 208
WL
Sbjct: 228 WL 229
>Z81515-2|CAB04197.2| 1691|Caenorhabditis elegans Hypothetical
protein F26H11.2a protein.
Length = 1691
Score = 26.6 bits (56), Expect = 6.2
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Frame = +2
Query: 44 LKKSKKVLEDIEKDNEDVEMSSDD-----ENVVVDSEGGKKRVFNTKTLK--DQNGQYPV 202
LK+ ++ + +++D+E+ E SSDD E+ VV E + + + K K D+ +Y
Sbjct: 168 LKRQEEDIIYMDEDSEEEEESSDDEFMLNEDQVVQEEEEELNLTDIKIEKGLDEENKYCP 227
Query: 203 WL 208
WL
Sbjct: 228 WL 229
>Z81077-12|CAH19097.1| 316|Caenorhabditis elegans Hypothetical
protein F36A2.14 protein.
Length = 316
Score = 26.6 bits (56), Expect = 6.2
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 47 KKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKK 151
K SKK ED+++ ++D +++ V S+ KK
Sbjct: 104 KNSKKTAEDMDQSSDDTTKPAEETKKTVSSKKQKK 138
>Z72505-1|CAA96608.1| 338|Caenorhabditis elegans Hypothetical
protein C50C10.2 protein.
Length = 338
Score = 26.6 bits (56), Expect = 6.2
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = -2
Query: 214 FVQPNRVLSVLIFQGFRIKNSFLAAFTIDHNVF 116
++ P V+ + I +R + L + T+DHN+F
Sbjct: 33 YILPTTVIMIAILVKYRKAKATLNSATMDHNIF 65
>Z50044-7|CAA90359.1| 1415|Caenorhabditis elegans Hypothetical
protein F22B5.7 protein.
Length = 1415
Score = 26.6 bits (56), Expect = 6.2
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +2
Query: 2 VMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLK 178
V E ++ + GD KK V E+ ++NE ++ E ++ D+E K+R+ K LK
Sbjct: 567 VEEEDEPLKPPPGDKKKKVPVKEN--EENEPPVVAPKAELLLSDNEDKKQRIKEEKQLK 623
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 26.6 bits (56), Expect = 6.2
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +2
Query: 38 GDLKKSKKVLEDIEKDNEDVEMSSDDENVV 127
GD K + E EK+ ED E DDE V
Sbjct: 3922 GDGSKGEAPKEKAEKEEEDEEKEKDDEEKV 3951
>AF038615-3|AAB94144.1| 328|Caenorhabditis elegans Hypothetical
protein R02D3.5 protein.
Length = 328
Score = 26.6 bits (56), Expect = 6.2
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Frame = +2
Query: 2 VMESEQVIFLDAG-DLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEG----GKKRVFNT 166
V + +V + G DLKK + L DI +++ +V++ G + F +
Sbjct: 79 VWQYRRVCLTELGWDLKKEMRYLSDIIQESPKNYQVWHHRRFIVETIGESAVNDELHFCS 138
Query: 167 KTLKDQNGQYPVWLH 211
+ ++D+N Y W H
Sbjct: 139 EVIRDENKNYHAWQH 153
>AF035197-1|AAC17865.1| 1415|Caenorhabditis elegans ZYG-9 protein.
Length = 1415
Score = 26.6 bits (56), Expect = 6.2
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +2
Query: 2 VMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLK 178
V E ++ + GD KK V E+ ++NE ++ E ++ D+E K+R+ K LK
Sbjct: 567 VEEEDEPLKPPPGDKKKKVPVKEN--EENEPPVVAPKAELLLSDNEDKKQRIKEEKQLK 623
>AC006665-2|AAF39904.1| 341|Caenorhabditis elegans Hypothetical
protein H27M09.5 protein.
Length = 341
Score = 26.6 bits (56), Expect = 6.2
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Frame = +2
Query: 47 KKSKKVLEDIEKDNED-----VEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQ 193
KKSKK + + DNED E +D N EG KK+ K++K +
Sbjct: 54 KKSKKSKREKKGDNEDEKENYKEDGNDHNNGSDRKEGSKKKKSRQKSMKSSRSK 107
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 26.2 bits (55), Expect = 8.2
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 41 DLKKSKKVLEDIEKDNEDVEMSSDDEN 121
D+KK KK ED +K++ED + +N
Sbjct: 364 DMKKDKKKKEDDDKEDEDDKKKDKKKN 390
>U41553-1|AAA83291.1| 1250|Caenorhabditis elegans Hypothetical
protein ZK1193.2 protein.
Length = 1250
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 95 VEMSSDDENVVVDSEGGKKRVFNTKTLKDQN 187
+E +S ++VDSE G+ V L DQN
Sbjct: 40 IEFNSTTHTLIVDSESGQDLVTGIFNLYDQN 70
>U41036-1|AAA82384.1| 315|Caenorhabditis elegans Hypothetical
protein T14E8.2 protein.
Length = 315
Score = 26.2 bits (55), Expect = 8.2
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +2
Query: 38 GDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQ 184
G L KSK + EKD++DV S ++ + +++ +++ N K K++
Sbjct: 239 GPLAKSKMYMN--EKDDDDVNKSVEESDEEEENQESEEQEDNDKAEKEE 285
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 26.2 bits (55), Expect = 8.2
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +2
Query: 14 EQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQN 187
E+ LDA +K+ + +EKD++ + S E V E KK+V KT K +
Sbjct: 9723 EEQAKLDAQTKEKTAEKQTGLEKDDKSTKDSESKETV---DEKPKKKVLKKKTEKSDS 9777
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 26.2 bits (55), Expect = 8.2
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +2
Query: 14 EQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQN 187
E+ LDA +K+ + +EKD++ + S E V E KK+V KT K +
Sbjct: 9743 EEQAKLDAQTKEKTAEKQTGLEKDDKSTKDSESKETV---DEKPKKKVLKKKTEKSDS 9797
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 26.2 bits (55), Expect = 8.2
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +2
Query: 14 EQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQN 187
E+ LDA +K+ + +EKD++ + S E V E KK+V KT K +
Sbjct: 9743 EEQAKLDAQTKEKTAEKQTGLEKDDKSTKDSESKETV---DEKPKKKVLKKKTEKSDS 9797
>AF040661-1|AAK82922.2| 508|Caenorhabditis elegans Hypothetical
protein W10G11.19 protein.
Length = 508
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 32 DAGDLKKSKKVLEDIEKDNED 94
DAG+LKKS K E EKD +
Sbjct: 116 DAGELKKSLKNFEIFEKDETE 136
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,852,526
Number of Sequences: 27780
Number of extensions: 76305
Number of successful extensions: 608
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 587646290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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