Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc25f18
(613 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0075 - 6572385-6572558,6573416-6573607,6574553-6574630,657... 260 5e-70
06_03_0542 + 21959533-21959785,21960732-21960846,21962815-219629... 260 6e-70
03_06_0366 + 33408671-33408745,33409342-33409398,33410398-334104... 258 3e-69
01_06_0339 + 28549449-28549529,28549768-28549914,28550027-285500... 214 5e-56
10_07_0165 + 13740611-13740706,13741159-13741215,13741523-137416... 212 2e-55
03_01_0473 - 3639533-3639598,3639848-3639955,3640037-3640126,364... 185 3e-47
09_02_0241 + 6179869-6180116,6180406-6180436,6182038-6182190,618... 128 2e-41
02_05_1246 - 35226759-35226860,35227521-35227715,35227804-352283... 160 9e-40
01_03_0220 - 13905808-13905831,13906694-13906885,13906960-139075... 157 6e-39
08_02_0893 + 22327485-22327671,22327756-22328627 157 9e-39
06_01_0457 - 3263519-3263749,3264565-3265175,3265966-3266143 140 8e-34
03_02_0491 + 8854438-8854657,8854897-8854942,8855268-8855307,885... 128 3e-30
03_05_0488 - 24847076-24847220,24847823-24847872,24848139-248482... 122 2e-28
12_02_1128 - 26341118-26341204,26341302-26341441,26341567-263416... 120 7e-28
05_01_0319 + 2503963-2504176,2504316-2504376,2504691-2504769,250... 120 7e-28
05_02_0083 + 6450694-6450766,6451391-6451560,6451633-6451704,645... 95 3e-20
08_02_1232 + 25429955-25430392,25430885-25431388,25432657-254328... 89 3e-18
04_03_0847 - 20254736-20254933,20256127-20256201,20257538-202577... 40 0.002
10_07_0076 - 12635577-12635693,12635814-12635989,12636358-126364... 31 0.54
10_07_0130 + 13241085-13241151,13241268-13241339,13242458-132428... 29 2.2
>02_02_0075 -
6572385-6572558,6573416-6573607,6574553-6574630,
6574712-6574820,6575442-6575556,6576280-6576535
Length = 307
Score = 260 bits (638), Expect = 5e-70
Identities = 115/144 (79%), Positives = 132/144 (91%)
Frame = +1
Query: 166 ELDQWIQQLNECKQLTENQVKTLCDKAKEILTKESNVQEVKCPVTVCGDVHGQFHDLMEL 345
+LD+ I QL ECK L E +V+ LC++AK IL +E NVQ V+CPVTVCGD+HGQF+DL+EL
Sbjct: 7 DLDRQIAQLRECKHLAEGEVRALCEQAKAILMEEWNVQPVRCPVTVCGDIHGQFYDLIEL 66
Query: 346 FRIGGRSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYG 525
FRIGG +PDTNYLFMGDYVDRGYYSVETV+LLVALKVRYR+RITILRGNHESRQITQVYG
Sbjct: 67 FRIGGEAPDTNYLFMGDYVDRGYYSVETVSLLVALKVRYRDRITILRGNHESRQITQVYG 126
Query: 526 FYDECLRKYGNASVWKHFTDLFDF 597
FYDECLRKYGNA+VWK+FTDLFD+
Sbjct: 127 FYDECLRKYGNANVWKYFTDLFDY 150
>06_03_0542 +
21959533-21959785,21960732-21960846,21962815-21962923,
21963027-21963104,21964200-21964391,21964995-21965168
Length = 306
Score = 260 bits (637), Expect = 6e-70
Identities = 117/144 (81%), Positives = 132/144 (91%)
Frame = +1
Query: 166 ELDQWIQQLNECKQLTENQVKTLCDKAKEILTKESNVQEVKCPVTVCGDVHGQFHDLMEL 345
+LD+ I QL ECK L E +V+ LC++AK IL +E NVQ V+CPVTVCGD+HGQF+DL+EL
Sbjct: 6 DLDRQISQLRECKFLGEAEVRALCEQAKAILMEEWNVQPVRCPVTVCGDIHGQFYDLIEL 65
Query: 346 FRIGGRSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYG 525
FRIGG SPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYR+RITILRGNHESRQITQVYG
Sbjct: 66 FRIGGDSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYG 125
Query: 526 FYDECLRKYGNASVWKHFTDLFDF 597
FYDECLRKYGNA+VWK+FTDLFD+
Sbjct: 126 FYDECLRKYGNANVWKYFTDLFDY 149
>03_06_0366 +
33408671-33408745,33409342-33409398,33410398-33410481,
33410575-33410646,33410768-33410839,33411011-33411051,
33411517-33411583,33411673-33411864,33411947-33412036,
33412111-33412218,33412513-33412578
Length = 307
Score = 258 bits (631), Expect = 3e-69
Identities = 116/143 (81%), Positives = 129/143 (90%)
Frame = +1
Query: 169 LDQWIQQLNECKQLTENQVKTLCDKAKEILTKESNVQEVKCPVTVCGDVHGQFHDLMELF 348
LD I++L +CK L E +V+ LC+KAKEIL +ESNVQ VK PVT+CGD+HGQFHDL ELF
Sbjct: 8 LDDQIERLMQCKPLPEPEVRALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELF 67
Query: 349 RIGGRSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGF 528
RIGG+ PDTNYLFMGDYVDRGYYSVETVTLLVALKVRY +RITILRGNHESRQITQVYGF
Sbjct: 68 RIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGF 127
Query: 529 YDECLRKYGNASVWKHFTDLFDF 597
YDECLRKYGNA+VWK FTDLFD+
Sbjct: 128 YDECLRKYGNANVWKTFTDLFDY 150
>01_06_0339 +
28549449-28549529,28549768-28549914,28550027-28550094,
28550771-28550828,28551474-28551584,28551668-28551718,
28552308-28552451,28552570-28552665,28552781-28552852,
28553392-28553475
Length = 303
Score = 214 bits (522), Expect = 5e-56
Identities = 91/147 (61%), Positives = 118/147 (80%)
Frame = +1
Query: 166 ELDQWIQQLNECKQLTENQVKTLCDKAKEILTKESNVQEVKCPVTVCGDVHGQFHDLMEL 345
+LD WI ++ E + L E+++++LC+ KEIL +ESNVQ V PVTVCGD+HGQFHDLM+L
Sbjct: 2 DLDLWISKVKEGQHLAEHELQSLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKL 61
Query: 346 FRIGGRSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYG 525
F GG P+TNY+FMGD+VDRG+ S+E T+L+ LK RY IT+LRGNHESRQ+TQVYG
Sbjct: 62 FATGGHVPETNYIFMGDFVDRGFNSLEVFTILLLLKARYPAHITLLRGNHESRQLTQVYG 121
Query: 526 FYDECLRKYGNASVWKHFTDLFDFPAL 606
FYDEC RKYGNA+ W++ TD+FD+ L
Sbjct: 122 FYDECQRKYGNANAWRYCTDVFDYLTL 148
>10_07_0165 +
13740611-13740706,13741159-13741215,13741523-13741681,
13742315-13742398,13742496-13742567,13742810-13742881,
13743085-13743125,13743296-13743362,13744033-13744224,
13744314-13744403,13744742-13744849,13745089-13745154
Length = 367
Score = 212 bits (517), Expect = 2e-55
Identities = 93/108 (86%), Positives = 103/108 (95%)
Frame = +1
Query: 274 VQEVKCPVTVCGDVHGQFHDLMELFRIGGRSPDTNYLFMGDYVDRGYYSVETVTLLVALK 453
++ VK PVT+CGD+HGQFHDL+ELFRIGG+ PDTNYLFMGDYVDRGYYSVETVTLLVALK
Sbjct: 103 MKPVKSPVTICGDIHGQFHDLVELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALK 162
Query: 454 VRYRERITILRGNHESRQITQVYGFYDECLRKYGNASVWKHFTDLFDF 597
VRY +RITILRGNHESRQITQVYGFYDECLRKYG+A+VWK FTDLFD+
Sbjct: 163 VRYPQRITILRGNHESRQITQVYGFYDECLRKYGSANVWKIFTDLFDY 210
Score = 55.6 bits (128), Expect = 3e-08
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = +1
Query: 169 LDQWIQQLNECKQLTENQVKTLCDKAKEILTKESNVQEVK 288
LD I+QL EC+ L+E +VKTLC+KAKEIL +ESNVQ ++
Sbjct: 15 LDAQIEQLMECRPLSEPEVKTLCEKAKEILMEESNVQVIR 54
>03_01_0473 -
3639533-3639598,3639848-3639955,3640037-3640126,
3640203-3640394,3640952-3641018,3641472-3641512,
3641762-3641779,3641984-3642055,3642154-3642237,
3642296-3642373,3642703-3642759,3643374-3643469
Length = 322
Score = 185 bits (450), Expect = 3e-47
Identities = 101/169 (59%), Positives = 113/169 (66%), Gaps = 26/169 (15%)
Frame = +1
Query: 169 LDQWIQQLNECKQLTENQVKTLCDKAKEILTKESNVQ----------------------- 279
LD I+QL +C+ L E +VK LC+KAKEIL +ESNVQ
Sbjct: 15 LDTQIEQLMQCRPLAEQEVKALCEKAKEILMEESNVQIAHSMCTYNSAKTFSKYLHVLFH 74
Query: 280 ---EVKCPVTVCGDVHGQFHDLMELFRIGGRSPDTNYLFMGDYVDRGYYSVETVTLLVAL 450
VK PVT+CGD+HGQFHDL+ELFRIGG+ PDTNYLFMGDYVDRGYYSVETVTLLVAL
Sbjct: 75 GNLPVKSPVTICGDIHGQFHDLVELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVAL 134
Query: 451 KVRYRERITILRGNHESRQITQVYGFYDECLRKYGNASVWKHFTDLFDF 597
K ITQVYGFYDECLRKYGNA+VWK FTDLFD+
Sbjct: 135 K------------------ITQVYGFYDECLRKYGNANVWKIFTDLFDY 165
>09_02_0241 +
6179869-6180116,6180406-6180436,6182038-6182190,
6182921-6182983,6183396-6183664,6184055-6184133,
6184213-6184263
Length = 297
Score = 128 bits (308), Expect(2) = 2e-41
Identities = 54/79 (68%), Positives = 68/79 (86%)
Frame = +1
Query: 283 VKCPVTVCGDVHGQFHDLMELFRIGGRSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRY 462
VK +CGD+HGQF+D+ ELF++GG P TNYLF+GD+VDRG+YSVET LL+ALKVRY
Sbjct: 88 VKIAGIICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRY 147
Query: 463 RERITILRGNHESRQITQV 519
+RIT++RGNHESRQITQ+
Sbjct: 148 PDRITLIRGNHESRQITQI 166
Score = 58.8 bits (136), Expect(2) = 2e-41
Identities = 28/46 (60%), Positives = 34/46 (73%)
Frame = +1
Query: 166 ELDQWIQQLNECKQLTENQVKTLCDKAKEILTKESNVQEVKCPVTV 303
+LD+ I+QL C+ LTE +VK LC KA EIL +ESNVQ V PVTV
Sbjct: 5 DLDRQIEQLKRCEPLTEAEVKALCLKAMEILVEESNVQRVDAPVTV 50
>02_05_1246 -
35226759-35226860,35227521-35227715,35227804-35228363,
35229299-35229476
Length = 344
Score = 160 bits (388), Expect = 9e-40
Identities = 66/130 (50%), Positives = 95/130 (73%)
Frame = +1
Query: 205 QLTENQVKTLCDKAKEILTKESNVQEVKCPVTVCGDVHGQFHDLMELFRIGGRSPDTNYL 384
QL+E+++K LC +KEI + N+ E++ P+ +CGDVHGQ+ DL+ LF GG P +NYL
Sbjct: 26 QLSESEIKQLCATSKEIFLNQPNLLELEAPIKICGDVHGQYSDLLRLFDYGGYPPQSNYL 85
Query: 385 FMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNAS 564
F+GDYVDRG S+ET+ LL+A K++Y E +LRGNHE + ++YGFYDEC R++ +
Sbjct: 86 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRIYGFYDECKRRF-SVK 144
Query: 565 VWKHFTDLFD 594
+WK FTD F+
Sbjct: 145 LWKTFTDCFN 154
>01_03_0220 -
13905808-13905831,13906694-13906885,13906960-13907519,
13910007-13910187
Length = 318
Score = 157 bits (381), Expect = 6e-39
Identities = 67/130 (51%), Positives = 95/130 (73%)
Frame = +1
Query: 205 QLTENQVKTLCDKAKEILTKESNVQEVKCPVTVCGDVHGQFHDLMELFRIGGRSPDTNYL 384
QL+E +++ LC +AK +L + N+ + PV +CGD+HGQF DL+ LF +GG P + YL
Sbjct: 27 QLSEAEIRQLCVEAKRVLLSQPNLLRIHAPVKICGDIHGQFVDLLRLFDLGGYPPTSTYL 86
Query: 385 FMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNAS 564
F+GDYVDRG S+ET+ LL+A KV+Y ++I +LRGNHE +I +VYGFYDEC R++ N
Sbjct: 87 FLGDYVDRGKQSLETICLLLAYKVKYPDKIFLLRGNHEDAKINRVYGFYDECKRRF-NVR 145
Query: 565 VWKHFTDLFD 594
+WK F D F+
Sbjct: 146 LWKIFCDCFN 155
>08_02_0893 + 22327485-22327671,22327756-22328627
Length = 352
Score = 157 bits (380), Expect = 9e-39
Identities = 65/130 (50%), Positives = 92/130 (70%)
Frame = +1
Query: 205 QLTENQVKTLCDKAKEILTKESNVQEVKCPVTVCGDVHGQFHDLMELFRIGGRSPDTNYL 384
QL+E +++ LC K+I + N+ E++ P+ VCGD+HGQF DL+ LF GG P NYL
Sbjct: 29 QLSEAEIRQLCVTGKDIFLSQPNLLELEAPINVCGDIHGQFSDLLRLFEFGGLPPTANYL 88
Query: 385 FMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNAS 564
F+GDYVDRG S+ET+ LL+A K++Y + +LRGNHE I ++YGFYDEC R++ +
Sbjct: 89 FLGDYVDRGKQSIETICLLLAYKIKYPDNFFLLRGNHECASINRIYGFYDECKRRF-SVR 147
Query: 565 VWKHFTDLFD 594
+WK FTD F+
Sbjct: 148 LWKLFTDCFN 157
>06_01_0457 - 3263519-3263749,3264565-3265175,3265966-3266143
Length = 339
Score = 140 bits (339), Expect = 8e-34
Identities = 63/147 (42%), Positives = 93/147 (63%), Gaps = 17/147 (11%)
Frame = +1
Query: 205 QLTENQVKTLCDKAKEILTKESNVQEVKCPVTVC-----------------GDVHGQFHD 333
QL + +++ LC AK++ + N+ E++ P+ +C GD+HGQ+ D
Sbjct: 26 QLADAEIRKLCAAAKDVFLSQPNLLELEAPIKICECDCIMLTIILPTYSLTGDIHGQYSD 85
Query: 334 LMELFRIGGRSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQIT 513
L+ LF GG P+ NYLF+GDYVDRG S+ET+ LL+A K++Y E +LRGNHE I
Sbjct: 86 LLRLFEYGGFPPEANYLFLGDYVDRGKQSIETICLLLAYKIKYPENFFLLRGNHECASIN 145
Query: 514 QVYGFYDECLRKYGNASVWKHFTDLFD 594
++YGF+DEC R++ N +WK FTD F+
Sbjct: 146 RIYGFFDECKRRF-NVRIWKVFTDCFN 171
>03_02_0491 +
8854438-8854657,8854897-8854942,8855268-8855307,
8856025-8856090,8856237-8856318,8857036-8857595,
8857681-8857771,8858300-8858316
Length = 373
Score = 128 bits (310), Expect = 3e-30
Identities = 54/96 (56%), Positives = 71/96 (73%)
Frame = +1
Query: 307 GDVHGQFHDLMELFRIGGRSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILR 486
GD+HGQ+ DL+ LF GG P+ NYLF+GDYVDRG S+ET+ LL+A K++Y E +LR
Sbjct: 152 GDIHGQYSDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 211
Query: 487 GNHESRQITQVYGFYDECLRKYGNASVWKHFTDLFD 594
GNHE I ++YGFYDEC R++ N +WK FTD F+
Sbjct: 212 GNHECASINRIYGFYDECKRRF-NVRLWKVFTDCFN 246
Score = 37.5 bits (83), Expect = 0.008
Identities = 12/35 (34%), Positives = 25/35 (71%)
Frame = +1
Query: 205 QLTENQVKTLCDKAKEILTKESNVQEVKCPVTVCG 309
QL+E++++ LC ++EI + N+ E++ P+ +CG
Sbjct: 40 QLSESEIRQLCTVSREIFLSQPNLLELEAPIKICG 74
>03_05_0488 - 24847076-24847220,24847823-24847872,24848139-24848278,
24848358-24848493,24848584-24848683,24848837-24848949,
24849034-24849132,24849227-24849311,24849799-24850037,
24850202-24850372,24850544-24850784,24850899-24851172,
24851481-24851660,24852170-24852251,24852336-24852437,
24853315-24853384,24853725-24853824,24853931-24854025,
24854105-24854184,24854361-24854439,24854603-24854663,
24855570-24855984
Length = 1018
Score = 122 bits (294), Expect = 2e-28
Identities = 65/158 (41%), Positives = 94/158 (59%), Gaps = 10/158 (6%)
Frame = +1
Query: 154 ASLKELDQWIQQLNECKQLTENQVKTLCDKAKEILTKESNVQEVKCPVTVCGDVHGQFHD 333
ASL + W + L N++ LCD A+ I + E +V ++K PV + GD+HGQF D
Sbjct: 653 ASLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPVKIFGDLHGQFGD 712
Query: 334 LMELFRIGGRSPDT-------NYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGN 492
LM LF G +P T +YLF+GDYVDRG +S+ET+TLL+ALKV Y + + ++RGN
Sbjct: 713 LMRLFDEYG-APSTAGDIAYIDYLFLGDYVDRGQHSLETMTLLLALKVEYPQNVHLIRGN 771
Query: 493 HESRQITQVYGFYDECLRKYGNAS---VWKHFTDLFDF 597
HE+ I ++GF EC+ + G W LF++
Sbjct: 772 HEAADINALFGFRIECIERMGERDGIWTWHRMNRLFNW 809
>12_02_1128 - 26341118-26341204,26341302-26341441,26341567-26341663,
26341755-26341830,26341919-26342118,26342199-26342297,
26342395-26342479,26342786-26343024,26343233-26343403,
26343605-26343848,26343980-26344253,26344755-26344934,
26345342-26345423,26346209-26346278,26346802-26346901,
26347003-26347097,26347181-26347317,26347342-26347420,
26347591-26347651,26348580-26349009
Length = 981
Score = 120 bits (290), Expect = 7e-28
Identities = 64/158 (40%), Positives = 93/158 (58%), Gaps = 10/158 (6%)
Frame = +1
Query: 154 ASLKELDQWIQQLNECKQLTENQVKTLCDKAKEILTKESNVQEVKCPVTVCGDVHGQFHD 333
ASL + W + L N++ LCD A+ I + E +V ++K P+ + GD+HGQF D
Sbjct: 644 ASLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGD 703
Query: 334 LMELFRIGGRSPDT-------NYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGN 492
LM LF G +P T +YLF+GDYVDRG +S+ET+TLL+ALKV Y + ++RGN
Sbjct: 704 LMRLFDEYG-APSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPLNVHLIRGN 762
Query: 493 HESRQITQVYGFYDECLRKYGNAS---VWKHFTDLFDF 597
HE+ I ++GF EC+ + G W LF++
Sbjct: 763 HEAADINALFGFRIECIERMGERDGIWTWHRMNRLFNW 800
>05_01_0319 +
2503963-2504176,2504316-2504376,2504691-2504769,
2504861-2504940,2505046-2505140,2505748-2505847,
2506647-2506716,2507657-2507758,2507972-2508053,
2508257-2508304,2508841-2509009,2509089-2509314,
2509961-2510131,2510200-2510438,2510600-2510684,
2510778-2510876,2510954-2511153,2511232-2511307,
2511463-2511675,2511763-2511815,2511999-2512151,
2512474-2512606
Length = 915
Score = 120 bits (290), Expect = 7e-28
Identities = 61/140 (43%), Positives = 87/140 (62%), Gaps = 10/140 (7%)
Frame = +1
Query: 208 LTENQVKTLCDKAKEILTKESNVQEVKCPVTVCGDVHGQFHDLMELFRIGGRSPDT---- 375
L +V LC A++I +E V ++K P+ V GD+HGQF DLM LF G P T
Sbjct: 520 LDSYEVGELCYAAEQIFMQEPTVLQLKAPIKVFGDLHGQFGDLMRLFDEYGY-PSTAGDI 578
Query: 376 ---NYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLR 546
+YLF+GDYVDRG +S+ET+TLL+ALK+ Y E + ++RGNHE+ I ++GF EC+
Sbjct: 579 TYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIE 638
Query: 547 KYGNAS---VWKHFTDLFDF 597
+ G + W F LF++
Sbjct: 639 RMGESDGIWAWTRFNQLFNY 658
>05_02_0083 +
6450694-6450766,6451391-6451560,6451633-6451704,
6451893-6452043,6452709-6452817,6452906-6453023,
6453214-6453361,6453520-6453768,6454209-6454334,
6454474-6454574,6454728-6454802,6455160-6455219
Length = 483
Score = 95.5 bits (227), Expect = 3e-20
Identities = 43/91 (47%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Frame = +1
Query: 298 TVCGDVHGQFHDLMELFRIGGRSPDTN-YLFMGDYVDRGYYSVETVTLLVALKVRYRERI 474
TVCGDVHGQ+ DL+ +F++ G + N YLF GD+VDRG +SVE + L A K Y +
Sbjct: 223 TVCGDVHGQYFDLLNIFKLNGLPSEENPYLFNGDFVDRGSFSVEVILTLFAFKCLYPTGM 282
Query: 475 TILRGNHESRQITQVYGFYDECLRKYGNASV 567
+ RGNHES+ + ++YGF E K G A +
Sbjct: 283 YLARGNHESKSMNKIYGFEGEVRSKLGEAFI 313
>08_02_1232 +
25429955-25430392,25430885-25431388,25432657-25432803,
25432999-25433106,25433242-25433331
Length = 428
Score = 89.0 bits (211), Expect = 3e-18
Identities = 56/131 (42%), Positives = 72/131 (54%), Gaps = 7/131 (5%)
Frame = +1
Query: 223 VKTLCDKAKEILTKESNVQEVKC----PVTVCGDVHGQFHDLMELFRIGG-RSPDTNYLF 387
V+ L A IL +E N+ V V V GDVHGQ HD++ L R G S D ++F
Sbjct: 65 VQRLVLAASVILHREPNLVRVDPRPDQAVVVVGDVHGQLHDVIFLLRDAGFPSDDRVFVF 124
Query: 388 MGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKY--GNA 561
GDYVDRG + +ET LL+A KV + +LRGNHES+ T VYGF E KY
Sbjct: 125 NGDYVDRGAWGLETFLLLLAWKVLLPNSVFLLRGNHESKYCTSVYGFEQEVNFKYKGQGP 184
Query: 562 SVWKHFTDLFD 594
V++ F F+
Sbjct: 185 QVYRKFLRCFE 195
>04_03_0847 -
20254736-20254933,20256127-20256201,20257538-20257717,
20257802-20257869,20258563-20259125,20259198-20259235
Length = 373
Score = 39.5 bits (88), Expect = 0.002
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Frame = +1
Query: 295 VTVC-GDVHGQFHDLMELF-RIGGRSPDTNY-----LFMGDYVDRGYYSVETVTLLVALK 453
V +C GDVHG L L+ + P + +F+GDY DRG + E + L+AL
Sbjct: 37 VVICVGDVHGYISKLESLWANLQSALPPDAFATALVVFLGDYCDRGPSTREVIDFLLALP 96
Query: 454 VRY-RERITILRGNHE 498
R+ +R L GNH+
Sbjct: 97 SRHPAQRHAFLCGNHD 112
>10_07_0076 -
12635577-12635693,12635814-12635989,12636358-12636493,
12636714-12636929,12637021-12637134,12637456-12637559,
12638417-12638687
Length = 377
Score = 31.5 bits (68), Expect = 0.54
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 8/61 (13%)
Frame = +1
Query: 388 MGDYVDRGYYSVETVTLLVALKVRYRER---ITILRGNHESRQITQVY-----GFYDECL 543
+GD +DRG + ++LL +L ++ + + + + GNHE+ + Y G +DEC+
Sbjct: 130 VGDILDRGEDEIAILSLLSSLNMQAKSQGGAVFQVNGNHETINVEGDYRYVDPGAFDECI 189
Query: 544 R 546
R
Sbjct: 190 R 190
>10_07_0130 +
13241085-13241151,13241268-13241339,13242458-13242862,
13243057-13243112,13244116-13244274,13244379-13244498,
13244591-13245361,13245902-13246078,13246192-13246669,
13247502-13248094
Length = 965
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +2
Query: 443 LRLRCVTARE*PSCEEITNRVRSLKCTASTTSVSGNTATRPSGSTS 580
LR+R +TARE P+ EE+ ++ L+ ++ + A + S S++
Sbjct: 667 LRIRVITAREVPTREEVMRQLEGLQTNKGGSNSAKPAAEKGSSSSA 712
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,382,673
Number of Sequences: 37544
Number of extensions: 254031
Number of successful extensions: 746
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1466594128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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