Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc25f18
(613 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein. 25 1.9
AF043442-1|AAC05667.1| 231|Anopheles gambiae putative pupal-spe... 25 1.9
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 25 2.5
AF043443-1|AAC05668.1| 232|Anopheles gambiae putative pupal-spe... 25 2.5
AF043441-1|AAC05666.1| 231|Anopheles gambiae putative pupal-spe... 25 2.5
AF043439-1|AAC05664.1| 239|Anopheles gambiae putative pupal-spe... 25 2.5
AF043438-1|AAC05663.1| 231|Anopheles gambiae putative pupal-spe... 25 2.5
AF043437-1|AAC05662.1| 239|Anopheles gambiae putative pupal-spe... 25 2.5
AF043436-1|AAC05661.1| 263|Anopheles gambiae putative pupal-spe... 25 2.5
AF043435-1|AAC05660.1| 231|Anopheles gambiae pupal-specific cut... 25 2.5
AF043433-3|AAC05658.1| 231|Anopheles gambiae putative pupal-spe... 25 2.5
AF043433-1|AAC05656.1| 231|Anopheles gambiae putative pupal-spe... 25 2.5
AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein ... 24 4.4
AF043434-1|AAC05659.1| 232|Anopheles gambiae putative pupal-spe... 24 4.4
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 23 5.9
>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
Length = 1459
Score = 25.0 bits (52), Expect = 1.9
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +2
Query: 479 SCEEITNRVRSLKCTASTTSVSGNTATRPSGSTSPIYSI 595
SCE I + +CT++++ S T++R SGS S +SI
Sbjct: 1330 SCERIAG--ETFECTSTSSKFS--TSSRGSGSDSGSHSI 1364
>AF043442-1|AAC05667.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2c protein.
Length = 231
Score = 25.0 bits (52), Expect = 1.9
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 351 AEQLHQVVKLTVHVAAYGH 295
A+ +H+V+ VHV++Y H
Sbjct: 150 AQPVHKVIAQNVHVSSYAH 168
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 24.6 bits (51), Expect = 2.5
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 139 IMEDKASLKELDQWIQQLNECKQLTENQVKTL 234
+ + K KEL+ WIQ+ E ++ E K +
Sbjct: 891 LKQQKTLQKELESWIQKEKEAQEKLEEDGKRM 922
>AF043443-1|AAC05668.1| 232|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 232
Score = 24.6 bits (51), Expect = 2.5
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 351 AEQLHQVVKLTVHVAAYGH 295
A+ +H+V+ VHV++Y H
Sbjct: 158 AQPVHKVIAQPVHVSSYAH 176
>AF043441-1|AAC05666.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 231
Score = 24.6 bits (51), Expect = 2.5
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 351 AEQLHQVVKLTVHVAAYGH 295
A+ +H+V+ VHV++Y H
Sbjct: 150 AQPVHKVIAQPVHVSSYAH 168
>AF043439-1|AAC05664.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 24.6 bits (51), Expect = 2.5
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 351 AEQLHQVVKLTVHVAAYGH 295
A+ +H+V+ VHV++Y H
Sbjct: 158 AQPVHKVIAQPVHVSSYAH 176
>AF043438-1|AAC05663.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 231
Score = 24.6 bits (51), Expect = 2.5
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 351 AEQLHQVVKLTVHVAAYGH 295
A+ +H+V+ VHV++Y H
Sbjct: 150 AQPVHKVIAQPVHVSSYAH 168
>AF043437-1|AAC05662.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 24.6 bits (51), Expect = 2.5
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 351 AEQLHQVVKLTVHVAAYGH 295
A+ +H+V+ VHV++Y H
Sbjct: 158 AQPVHKVIAQPVHVSSYAH 176
>AF043436-1|AAC05661.1| 263|Anopheles gambiae putative
pupal-specific cuticular proteinCP2c protein.
Length = 263
Score = 24.6 bits (51), Expect = 2.5
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 351 AEQLHQVVKLTVHVAAYGH 295
A+ +H+V+ VHV++Y H
Sbjct: 182 AQPVHKVIAQPVHVSSYAH 200
>AF043435-1|AAC05660.1| 231|Anopheles gambiae pupal-specific
cuticular protein CP2b protein.
Length = 231
Score = 24.6 bits (51), Expect = 2.5
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 351 AEQLHQVVKLTVHVAAYGH 295
A+ +H+V+ VHV++Y H
Sbjct: 150 AQPVHKVIAQPVHVSSYAH 168
>AF043433-3|AAC05658.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 231
Score = 24.6 bits (51), Expect = 2.5
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 351 AEQLHQVVKLTVHVAAYGH 295
A+ +H+V+ VHV++Y H
Sbjct: 150 AQPVHKVIAQPVHVSSYAH 168
>AF043433-1|AAC05656.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 231
Score = 24.6 bits (51), Expect = 2.5
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 351 AEQLHQVVKLTVHVAAYGH 295
A+ +H+V+ VHV++Y H
Sbjct: 150 AQPVHKVIAQPVHVSSYAH 168
>AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein
protein.
Length = 596
Score = 23.8 bits (49), Expect = 4.4
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 394 DYVDRGYYSVETVTLLV 444
D++DRGY + E V +V
Sbjct: 312 DFIDRGYVTFENVNFVV 328
>AF043434-1|AAC05659.1| 232|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 232
Score = 23.8 bits (49), Expect = 4.4
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 351 AEQLHQVVKLTVHVAAYGH 295
A +H+V+ VHV++Y H
Sbjct: 158 AHPVHKVIAQPVHVSSYAH 176
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 23.4 bits (48), Expect = 5.9
Identities = 13/46 (28%), Positives = 18/46 (39%)
Frame = +2
Query: 476 PSCEEITNRVRSLKCTASTTSVSGNTATRPSGSTSPIYSIFLPLTA 613
P E+T V TA+ TAT P+ +P + P A
Sbjct: 1099 PLLLEVTTTVDHTPVTAAVAVAEAATATSPAAEVAPRIAEVAPFPA 1144
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 578,344
Number of Sequences: 2352
Number of extensions: 9907
Number of successful extensions: 40
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59711994
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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