Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc25f13
         (640 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT016113-1|AAV36998.1| 1193|Drosophila melanogaster LD10462p pro...    52   7e-07
BT001511-1|AAN71266.1| 1193|Drosophila melanogaster LD43392p pro...    52   7e-07
AE014297-2173|AAF55292.2| 1193|Drosophila melanogaster CG12785-P...    52   7e-07
AY061571-1|AAL29119.1|  539|Drosophila melanogaster SD01935p pro...    28   9.3  

>BT016113-1|AAV36998.1| 1193|Drosophila melanogaster LD10462p
           protein.
          Length = 1193

 Score = 52.0 bits (119), Expect = 7e-07
 Identities = 40/149 (26%), Positives = 68/149 (45%)
 Frame = +3

Query: 192 RQPTVNELNRLQETETLFNSNLFRXXXXXXXXXXXXXXXXXXRFLQWFKDFKNHLDSIPT 371
           + PT+ E+  L++T+ LF+SNLF+                      W + F     +  T
Sbjct: 70  KPPTLEEMKELRDTQNLFHSNLFKLQVKEMLEELQLKQKYTDFIENWLESF-----TAFT 124

Query: 372 DDTEYDLTEHTLTKKIKVKLPISEELKMTKCVFKFHKFETVDIVGSYALGCAINSKLVVD 551
              +  L E T    ++V + +SE  K T  VF     E   ++G+ A G  +  K+VVD
Sbjct: 125 RQLKDGLMERT---HLEVPMKLSE--KPTGFVFSKPTREPY-LIGAAATGTLLGPKIVVD 178

Query: 552 LQITVPSQTYTKNDSINYRYHKKTCSLLS 638
           + + +P ++  K D +N RY +K    L+
Sbjct: 179 VALEMPKESLHKEDYLNLRYDQKRALYLT 207


>BT001511-1|AAN71266.1| 1193|Drosophila melanogaster LD43392p
           protein.
          Length = 1193

 Score = 52.0 bits (119), Expect = 7e-07
 Identities = 40/149 (26%), Positives = 68/149 (45%)
 Frame = +3

Query: 192 RQPTVNELNRLQETETLFNSNLFRXXXXXXXXXXXXXXXXXXRFLQWFKDFKNHLDSIPT 371
           + PT+ E+  L++T+ LF+SNLF+                      W + F     +  T
Sbjct: 70  KPPTLEEMKELRDTQNLFHSNLFKLQVKEMLEELQLKQKYTDFIENWLESF-----TAFT 124

Query: 372 DDTEYDLTEHTLTKKIKVKLPISEELKMTKCVFKFHKFETVDIVGSYALGCAINSKLVVD 551
              +  L E T    ++V + +SE  K T  VF     E   ++G+ A G  +  K+VVD
Sbjct: 125 RQLKDGLMERT---HLEVPMKLSE--KPTGFVFSKPTREPY-LIGAAATGTLLGPKIVVD 178

Query: 552 LQITVPSQTYTKNDSINYRYHKKTCSLLS 638
           + + +P ++  K D +N RY +K    L+
Sbjct: 179 VALEMPKESLHKEDYLNLRYDQKRALYLT 207


>AE014297-2173|AAF55292.2| 1193|Drosophila melanogaster CG12785-PA
           protein.
          Length = 1193

 Score = 52.0 bits (119), Expect = 7e-07
 Identities = 40/149 (26%), Positives = 68/149 (45%)
 Frame = +3

Query: 192 RQPTVNELNRLQETETLFNSNLFRXXXXXXXXXXXXXXXXXXRFLQWFKDFKNHLDSIPT 371
           + PT+ E+  L++T+ LF+SNLF+                      W + F     +  T
Sbjct: 70  KPPTLEEMKELRDTQNLFHSNLFKLQVKEMLEELQLKQKYTDFIENWLESF-----TAFT 124

Query: 372 DDTEYDLTEHTLTKKIKVKLPISEELKMTKCVFKFHKFETVDIVGSYALGCAINSKLVVD 551
              +  L E T    ++V + +SE  K T  VF     E   ++G+ A G  +  K+VVD
Sbjct: 125 RQLKDGLMERT---HLEVPMKLSE--KPTGFVFSKPTREPY-LIGAAATGTLLGPKIVVD 178

Query: 552 LQITVPSQTYTKNDSINYRYHKKTCSLLS 638
           + + +P ++  K D +N RY +K    L+
Sbjct: 179 VALEMPKESLHKEDYLNLRYDQKRALYLT 207


>AY061571-1|AAL29119.1|  539|Drosophila melanogaster SD01935p
           protein.
          Length = 539

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
 Frame = +3

Query: 348 NHLD-SIPTDDTEYDLTEHTLTKKIKVKLPISEELKM 455
           NH++ SI  D T+YD +E    ++IK+ LP+++ + +
Sbjct: 398 NHINCSIFIDGTKYDDSELFYQERIKLSLPVTKNISI 434


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,765,877
Number of Sequences: 53049
Number of extensions: 355678
Number of successful extensions: 956
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)