Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc25f01
         (385 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   2.9  
AY752896-1|AAV30070.1|  105|Anopheles gambiae peroxidase 4A prot...    23   3.8  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    23   5.1  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   5.1  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    22   6.7  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    22   8.9  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
 Frame = -2

Query: 183 FEQFGTILHIYVCPLNHNRIIVEYANSESV----QKAMTVND 70
           F++   +L  +   L+HNR ++     ES+     KA T ND
Sbjct: 194 FKEVSKLLKQHGIDLDHNRFLILQGEVESIAMMKSKAQTEND 235


>AY752896-1|AAV30070.1|  105|Anopheles gambiae peroxidase 4A
           protein.
          Length = 105

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 13/49 (26%), Positives = 22/49 (44%)
 Frame = -2

Query: 168 TILHIYVCPLNHNRIIVEYANSESVQKAMTVNDDDARFTVTEFSVVQYY 22
           T+LH     L HNR+  E A+  +     TV     +  + ++  + YY
Sbjct: 9   TLLH-QAFHLEHNRLARELADLNAGWDDETVFQQARKLNIAQYQRIVYY 56


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 1325

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 15/61 (24%), Positives = 26/61 (42%)
 Frame = -2

Query: 339 KLYNREIKQKTKTIIVKRPTTMNRIQIDWKPHSEDEQKMTKQEIAENIVKPCFEQFGTIL 160
           KL +  +  +T      RPTT+N +    K H E +  +   E+   +    FE   + +
Sbjct: 209 KLDSESLVFRTSRTAWYRPTTLNDLLALKKAHPETKIVVGNTEVGVEVKFKHFEYPSSPI 268

Query: 159 H 157
           H
Sbjct: 269 H 269


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 127 NYCRVCKLRVSTKSHDCKRRRRSI 56
           N  RVC   +ST   + +RRRR++
Sbjct: 357 NETRVCGENISTFQLEERRRRRTV 380


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 126 FGCDLKDIRICVIWCQIVQNKALQCFRQ 209
           F  +LK ++I V  CQ  Q+ ALQ  R+
Sbjct: 20  FAFNLKVMQINVDHCQAGQDLALQAARE 47


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 129  GCDLKDIRICVIWCQIVQNKAL 194
            GC + ++   VIW  +V++ AL
Sbjct: 1901 GCAVYEVAYQVIWICLVEDSAL 1922


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 359,526
Number of Sequences: 2352
Number of extensions: 6370
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29501847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)