Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc25e18
         (598 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical pr...    31   0.82 
Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical pr...    29   1.9  
U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical pr...    29   1.9  
U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z96048-3|CAB09418.1|  733|Caenorhabditis elegans Hypothetical pr...    29   3.3  
U50311-9|AAA92313.1|  137|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z71181-9|CAD44140.1|  960|Caenorhabditis elegans Hypothetical pr...    27   7.7  
Z71178-18|CAH04640.1|  671|Caenorhabditis elegans Hypothetical p...    27   7.7  
Z71178-17|CAD44089.1|  898|Caenorhabditis elegans Hypothetical p...    27   7.7  
Z71178-15|CAD44087.1|  960|Caenorhabditis elegans Hypothetical p...    27   7.7  
Z71178-14|CAA94886.3|  894|Caenorhabditis elegans Hypothetical p...    27   7.7  
L12018-4|AAK68342.1|  456|Caenorhabditis elegans Dnaj domain (pr...    27   7.7  
L12018-3|AAK68343.1|  446|Caenorhabditis elegans Dnaj domain (pr...    27   7.7  
AL021478-4|CAJ26240.1|  671|Caenorhabditis elegans Hypothetical ...    27   7.7  
AL021478-3|CAF32233.1|  898|Caenorhabditis elegans Hypothetical ...    27   7.7  
AL021478-1|CAC35857.2|  894|Caenorhabditis elegans Hypothetical ...    27   7.7  

>U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical
           protein C27A2.5 protein.
          Length = 188

 Score = 30.7 bits (66), Expect = 0.82
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -2

Query: 414 CRTKTCVCNVWRITCRRNCAPKRCCS 337
           CR K C C     TC R C   RCC+
Sbjct: 88  CRPKCCCCCRRCCTCCRTCCCTRCCT 113


>Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical
           protein R13H4.8 protein.
          Length = 212

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -2

Query: 414 CRTKTCVCNVWRITCRRNCAPKRCCS 337
           CR + C C     TC R C   RCC+
Sbjct: 89  CRPRCCCCCRRCCTCCRTCCCTRCCT 114


>Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical
           protein T01B7.8 protein.
          Length = 164

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -2

Query: 414 CRTKTCVCNVWRITCRRNCAPKRCCS 337
           CR + C C     TC R C   RCC+
Sbjct: 87  CRPRCCCCCRRCCTCCRTCCCTRCCT 112


>U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical
           protein C04G6.10 protein.
          Length = 166

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -2

Query: 414 CRTKTCVCNVWRITCRRNCAPKRCCS 337
           CR + C C     TC R C   RCC+
Sbjct: 88  CRPRCCCCCRRCCTCCRTCCCTRCCT 113


>U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical
           protein C04G6.7 protein.
          Length = 197

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -2

Query: 414 CRTKTCVCNVWRITCRRNCAPKRCCS 337
           CR + C C     TC R C   RCC+
Sbjct: 89  CRPRCCCCCRRCCTCCRTCCCTRCCT 114


>Z96048-3|CAB09418.1|  733|Caenorhabditis elegans Hypothetical
           protein F57A10.3 protein.
          Length = 733

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -1

Query: 481 KTSFCLS*TSWIARLMCFS*STLPYKNMRLQCLA 380
           K+SF +S  S ++RL C   S++P  + RL C A
Sbjct: 63  KSSFHMSLLSHLSRLCCSKCSSIPSSSTRLFCFA 96


>U50311-9|AAA92313.1|  137|Caenorhabditis elegans Hypothetical
           protein C25E10.8 protein.
          Length = 137

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 6/50 (12%)
 Frame = -2

Query: 435 CAFLDPRCRTKTCVCNVWRITCRRNC------APKRCCSSLCWENSKICR 304
           C         KTC  N   + C  +C       PK C S+ C EN+  C+
Sbjct: 9   CFIAAATAANKTCGANEEMVACHDHCETQCGYTPKVCLSAQCIENACDCK 58


>Z71181-9|CAD44140.1|  960|Caenorhabditis elegans Hypothetical
           protein B0024.14b protein.
          Length = 960

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -2

Query: 402 TCVCNVWRITCRRNCAPKRCCSSLCWENSKICRP 301
           +C C V  + CR    P   C +  ++N + C P
Sbjct: 623 SCTCRVGHVLCRTTECPPIACPNPEYQNEEDCCP 656


>Z71178-18|CAH04640.1|  671|Caenorhabditis elegans Hypothetical
           protein B0024.14e protein.
          Length = 671

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -2

Query: 402 TCVCNVWRITCRRNCAPKRCCSSLCWENSKICRP 301
           +C C V  + CR    P   C +  ++N + C P
Sbjct: 557 SCTCRVGHVLCRTTECPPIACPNPEYQNEEDCCP 590


>Z71178-17|CAD44089.1|  898|Caenorhabditis elegans Hypothetical
           protein B0024.14d protein.
          Length = 898

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -2

Query: 402 TCVCNVWRITCRRNCAPKRCCSSLCWENSKICRP 301
           +C C V  + CR    P   C +  ++N + C P
Sbjct: 557 SCTCRVGHVLCRTTECPPIACPNPEYQNEEDCCP 590


>Z71178-15|CAD44087.1|  960|Caenorhabditis elegans Hypothetical
           protein B0024.14b protein.
          Length = 960

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -2

Query: 402 TCVCNVWRITCRRNCAPKRCCSSLCWENSKICRP 301
           +C C V  + CR    P   C +  ++N + C P
Sbjct: 623 SCTCRVGHVLCRTTECPPIACPNPEYQNEEDCCP 656


>Z71178-14|CAA94886.3|  894|Caenorhabditis elegans Hypothetical
           protein B0024.14a protein.
          Length = 894

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -2

Query: 402 TCVCNVWRITCRRNCAPKRCCSSLCWENSKICRP 301
           +C C V  + CR    P   C +  ++N + C P
Sbjct: 557 SCTCRVGHVLCRTTECPPIACPNPEYQNEEDCCP 590


>L12018-4|AAK68342.1|  456|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 10, isoform a
           protein.
          Length = 456

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
 Frame = +3

Query: 249 RETDDIDANNNINGTFMLDGRFLSFPNIMMNNNVLVH-------NFYDKLYAKHCKRMFL 407
           RE DDI  + +I+    + G  +  P I  N +  VH       +   +L  K  KR+  
Sbjct: 297 REKDDIHCDVDISLAQAVLGGTVKVPGI--NGDTYVHIPAGTGSHTKMRLTGKGVKRLHS 354

Query: 408 YGNVDQEKHINRAI-QLVYDKQNDVLFA 488
           YGN DQ  HI   + + +  +Q  ++ A
Sbjct: 355 YGNGDQYMHIKVTVPKYLTAEQKQIMLA 382


>L12018-3|AAK68343.1|  446|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 10, isoform b
           protein.
          Length = 446

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
 Frame = +3

Query: 249 RETDDIDANNNINGTFMLDGRFLSFPNIMMNNNVLVH-------NFYDKLYAKHCKRMFL 407
           RE DDI  + +I+    + G  +  P I  N +  VH       +   +L  K  KR+  
Sbjct: 297 REKDDIHCDVDISLAQAVLGGTVKVPGI--NGDTYVHIPAGTGSHTKMRLTGKGVKRLHS 354

Query: 408 YGNVDQEKHINRAI-QLVYDKQNDVLFA 488
           YGN DQ  HI   + + +  +Q  ++ A
Sbjct: 355 YGNGDQYMHIKVTVPKYLTAEQKQIMLA 382


>AL021478-4|CAJ26240.1|  671|Caenorhabditis elegans Hypothetical
           protein B0024.14e protein.
          Length = 671

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -2

Query: 402 TCVCNVWRITCRRNCAPKRCCSSLCWENSKICRP 301
           +C C V  + CR    P   C +  ++N + C P
Sbjct: 557 SCTCRVGHVLCRTTECPPIACPNPEYQNEEDCCP 590


>AL021478-3|CAF32233.1|  898|Caenorhabditis elegans Hypothetical
           protein B0024.14d protein.
          Length = 898

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -2

Query: 402 TCVCNVWRITCRRNCAPKRCCSSLCWENSKICRP 301
           +C C V  + CR    P   C +  ++N + C P
Sbjct: 557 SCTCRVGHVLCRTTECPPIACPNPEYQNEEDCCP 590


>AL021478-1|CAC35857.2|  894|Caenorhabditis elegans Hypothetical
           protein B0024.14a protein.
          Length = 894

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -2

Query: 402 TCVCNVWRITCRRNCAPKRCCSSLCWENSKICRP 301
           +C C V  + CR    P   C +  ++N + C P
Sbjct: 557 SCTCRVGHVLCRTTECPPIACPNPEYQNEEDCCP 590


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,300,902
Number of Sequences: 27780
Number of extensions: 284844
Number of successful extensions: 812
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 806
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)