Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc25e17
(539 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical pr... 178 2e-45
AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h at... 178 2e-45
AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein ... 178 2e-45
AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein. 178 2e-45
Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical pr... 162 2e-40
AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein. 162 2e-40
Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical pr... 62 2e-10
AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein. 62 2e-10
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 33 0.100
AC006689-3|AAO21400.1| 310|Caenorhabditis elegans Hypothetical ... 32 0.23
AC006689-2|AAF39970.2| 341|Caenorhabditis elegans Hypothetical ... 32 0.23
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 31 0.40
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 29 2.8
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z75955-5|CAB00119.2| 285|Caenorhabditis elegans Hypothetical pr... 29 2.8
U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related... 29 2.8
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 29 2.8
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 29 2.8
U88308-4|AAB42323.1| 299|Caenorhabditis elegans Hypothetical pr... 28 3.7
AF039050-10|AAC47933.2| 362|Caenorhabditis elegans Seven tm rec... 28 3.7
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical pr... 28 4.9
D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein. 28 4.9
AF099923-3|AAN63403.1| 784|Caenorhabditis elegans Ferm domain (... 28 4.9
AF099923-2|AAM48544.1| 814|Caenorhabditis elegans Ferm domain (... 28 4.9
AF099923-1|AAM48545.1| 853|Caenorhabditis elegans Ferm domain (... 28 4.9
Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical pr... 27 6.5
AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical ... 27 6.5
Z82286-5|CAB05311.1| 130|Caenorhabditis elegans Hypothetical pr... 27 8.6
U97005-9|AAK72085.1| 829|Caenorhabditis elegans Hypothetical pr... 27 8.6
>Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical
protein R10E11.2 protein.
Length = 161
Score = 178 bits (434), Expect = 2e-45
Identities = 90/128 (70%), Positives = 99/128 (77%), Gaps = 1/128 (0%)
Frame = +2
Query: 158 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 337
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 338 LVVAVLIAGAL-QEPANYPLYKGFIHLGAGLAVXFSGLAAGFAIXIVGDAGVRGTAXQPX 514
LVVA+++ G + A Y L KGF HL AGL GL AG+AI IVGDAGVRGTA QP
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPR 132
Query: 515 LFVGMILI 538
LFVGMILI
Sbjct: 133 LFVGMILI 140
Score = 31.5 bits (68), Expect = 0.40
Identities = 14/63 (22%), Positives = 30/63 (47%)
Frame = +2
Query: 170 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 349
F + A LGA Y G + +P L + I+ ++ + ++ +YG++VA
Sbjct: 96 FAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVA 155
Query: 350 VLI 358
+++
Sbjct: 156 LIL 158
>AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h
atpase protein 3 protein.
Length = 161
Score = 178 bits (434), Expect = 2e-45
Identities = 90/128 (70%), Positives = 99/128 (77%), Gaps = 1/128 (0%)
Frame = +2
Query: 158 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 337
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 338 LVVAVLIAGAL-QEPANYPLYKGFIHLGAGLAVXFSGLAAGFAIXIVGDAGVRGTAXQPX 514
LVVA+++ G + A Y L KGF HL AGL GL AG+AI IVGDAGVRGTA QP
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPR 132
Query: 515 LFVGMILI 538
LFVGMILI
Sbjct: 133 LFVGMILI 140
Score = 31.5 bits (68), Expect = 0.40
Identities = 14/63 (22%), Positives = 30/63 (47%)
Frame = +2
Query: 170 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 349
F + A LGA Y G + +P L + I+ ++ + ++ +YG++VA
Sbjct: 96 FAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVA 155
Query: 350 VLI 358
+++
Sbjct: 156 LIL 158
>AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein
protein.
Length = 161
Score = 178 bits (434), Expect = 2e-45
Identities = 90/128 (70%), Positives = 99/128 (77%), Gaps = 1/128 (0%)
Frame = +2
Query: 158 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 337
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 338 LVVAVLIAGAL-QEPANYPLYKGFIHLGAGLAVXFSGLAAGFAIXIVGDAGVRGTAXQPX 514
LVVA+++ G + A Y L KGF HL AGL GL AG+AI IVGDAGVRGTA QP
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPR 132
Query: 515 LFVGMILI 538
LFVGMILI
Sbjct: 133 LFVGMILI 140
Score = 31.5 bits (68), Expect = 0.40
Identities = 14/63 (22%), Positives = 30/63 (47%)
Frame = +2
Query: 170 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 349
F + A LGA Y G + +P L + I+ ++ + ++ +YG++VA
Sbjct: 96 FAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVA 155
Query: 350 VLI 358
+++
Sbjct: 156 LIL 158
>AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein.
Length = 161
Score = 178 bits (434), Expect = 2e-45
Identities = 90/128 (70%), Positives = 99/128 (77%), Gaps = 1/128 (0%)
Frame = +2
Query: 158 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 337
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 338 LVVAVLIAGAL-QEPANYPLYKGFIHLGAGLAVXFSGLAAGFAIXIVGDAGVRGTAXQPX 514
LVVA+++ G + A Y L KGF HL AGL GL AG+AI IVGDAGVRGTA QP
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPR 132
Query: 515 LFVGMILI 538
LFVGMILI
Sbjct: 133 LFVGMILI 140
Score = 31.5 bits (68), Expect = 0.40
Identities = 14/63 (22%), Positives = 30/63 (47%)
Frame = +2
Query: 170 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 349
F + A LGA Y G + +P L + I+ ++ + ++ +YG++VA
Sbjct: 96 FAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVA 155
Query: 350 VLI 358
+++
Sbjct: 156 LIL 158
>Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical
protein R10E11.8 protein.
Length = 169
Score = 162 bits (393), Expect = 2e-40
Identities = 77/129 (59%), Positives = 98/129 (75%), Gaps = 1/129 (0%)
Frame = +2
Query: 155 IYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 334
+YGPFFG +G SA+ F+A G+AYGTAK+GTGIA+M+V RP+L+MK+IIPVVMAGI+AIY
Sbjct: 20 MYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIY 79
Query: 335 GLVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVXFSGLAAGFAIXIVGDAGVRGTAXQP 511
GLVVAV+++G ++ ANY + F GL GL AG+AI I GDAGVR + QP
Sbjct: 80 GLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALSQQP 139
Query: 512 XLFVGMILI 538
+FVGMILI
Sbjct: 140 RMFVGMILI 148
Score = 34.7 bits (76), Expect = 0.043
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +2
Query: 212 LGAAYGTAKSG-TGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGA 367
LGA Y +G G+ A+S +P + + I+ ++ A ++ +YG++VA LI GA
Sbjct: 118 LGAGYAIGIAGDAGVRALS-QQPRMFVGMILILIFAEVLGLYGMIVA-LILGA 168
>AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein.
Length = 169
Score = 162 bits (393), Expect = 2e-40
Identities = 77/129 (59%), Positives = 98/129 (75%), Gaps = 1/129 (0%)
Frame = +2
Query: 155 IYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 334
+YGPFFG +G SA+ F+A G+AYGTAK+GTGIA+M+V RP+L+MK+IIPVVMAGI+AIY
Sbjct: 20 MYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIY 79
Query: 335 GLVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVXFSGLAAGFAIXIVGDAGVRGTAXQP 511
GLVVAV+++G ++ ANY + F GL GL AG+AI I GDAGVR + QP
Sbjct: 80 GLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALSQQP 139
Query: 512 XLFVGMILI 538
+FVGMILI
Sbjct: 140 RMFVGMILI 148
Score = 34.7 bits (76), Expect = 0.043
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +2
Query: 212 LGAAYGTAKSG-TGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGA 367
LGA Y +G G+ A+S +P + + I+ ++ A ++ +YG++VA LI GA
Sbjct: 118 LGAGYAIGIAGDAGVRALS-QQPRMFVGMILILIFAEVLGLYGMIVA-LILGA 168
>Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical
protein T01H3.1 protein.
Length = 214
Score = 62.5 bits (145), Expect = 2e-10
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 14/134 (10%)
Frame = +2
Query: 179 MGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLI 358
+G ++ S LGA +G +G+ I V P + K+++ ++ +AI+G+++A +
Sbjct: 54 LGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMAFVF 113
Query: 359 AGALQE--PANYP------------LYKGFIHLGAGLAVXFSGLAAGFAIXIVGDAGVRG 496
G L E + P L G++ G GL V S L G A+ IVG
Sbjct: 114 VGKLAEFRREDLPDTEDGMAILARNLASGYMIFGGGLTVGLSNLVCGLAVGIVGSGAAIA 173
Query: 497 TAXQPXLFVGMILI 538
A P LFV +++I
Sbjct: 174 DAANPALFVKILII 187
>AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein.
Length = 214
Score = 62.5 bits (145), Expect = 2e-10
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 14/134 (10%)
Frame = +2
Query: 179 MGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLI 358
+G ++ S LGA +G +G+ I V P + K+++ ++ +AI+G+++A +
Sbjct: 54 LGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMAFVF 113
Query: 359 AGALQE--PANYP------------LYKGFIHLGAGLAVXFSGLAAGFAIXIVGDAGVRG 496
G L E + P L G++ G GL V S L G A+ IVG
Sbjct: 114 VGKLAEFRREDLPDTEDGMAILARNLASGYMIFGGGLTVGLSNLVCGLAVGIVGSGAAIA 173
Query: 497 TAXQPXLFVGMILI 538
A P LFV +++I
Sbjct: 174 DAANPALFVKILII 187
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 33.5 bits (73), Expect = 0.100
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 292 VDHSCRHGGYYCHLRSGRGCPDCWCPPG 375
V H C +GG+ + S R P C CP G
Sbjct: 1800 VGHECLNGGFCSYANSNRSLPHCICPSG 1827
>AC006689-3|AAO21400.1| 310|Caenorhabditis elegans Hypothetical
protein T22E7.1b protein.
Length = 310
Score = 32.3 bits (70), Expect = 0.23
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 391 GVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDR 293
GVVG +G+ D H+ T G N+ HD + D+
Sbjct: 12 GVVGAYAQGSCRTDQHEMTCRGKNSLHDLKKDQ 44
>AC006689-2|AAF39970.2| 341|Caenorhabditis elegans Hypothetical
protein T22E7.1a protein.
Length = 341
Score = 32.3 bits (70), Expect = 0.23
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 391 GVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDR 293
GVVG +G+ D H+ T G N+ HD + D+
Sbjct: 12 GVVGAYAQGSCRTDQHEMTCRGKNSLHDLKKDQ 44
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 31.5 bits (68), Expect = 0.40
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Frame = +3
Query: 69 SECVQIVITVFGTCKYSHI*QTKWLKIIQS-------TDPSLELWGRRLLSSSAPWELPM 227
SE V ++ F TC + + T + +QS ++ W R +L +PW L M
Sbjct: 283 SEAVPLLGVFFHTCNFISVLATSFTVYVQSFHFRNQHVHERMDFWMRFILLEWSPWLLRM 342
Query: 228 ELPSQE 245
++P +E
Sbjct: 343 KMPDRE 348
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.7 bits (61), Expect = 2.8
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 322 YCHLRSGRGCPDCWCPPGASQ 384
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 28.7 bits (61), Expect = 2.8
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -1
Query: 92 DDYLHTLTPRNYFCTDKYGPSFADSTEWVI 3
+D L L N+ CT+ +G + D WVI
Sbjct: 376 NDVLRNLKTINFNCTESFGTNINDEEAWVI 405
>Z75955-5|CAB00119.2| 285|Caenorhabditis elegans Hypothetical
protein R07B7.10 protein.
Length = 285
Score = 28.7 bits (61), Expect = 2.8
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Frame = +2
Query: 329 IYGLVVAVLIAGALQEPANYPLYKG----FIHLGAGLAVXFSGLAAGFAIXIVGDAGVRG 496
IY +V ++ QE Y LYKG FI GA ++ F+G AG GD+ V
Sbjct: 34 IYKGIVDCMVKTMKQESV-YGLYKGMFVPFISTGALHSLLFAGYGAGLKFLNPGDSNVMA 92
Query: 497 TAXQP 511
P
Sbjct: 93 RKDLP 97
>U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related.
see also lmb-protein 2 protein.
Length = 1535
Score = 28.7 bits (61), Expect = 2.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 304 CRHGGYYCHLRSGRGCPDCWCPPGASQ 384
C HG Y ++ SG GC +C C P S+
Sbjct: 915 CAHGFY--NITSGLGCQECNCDPLGSE 939
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.7 bits (61), Expect = 2.8
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 322 YCHLRSGRGCPDCWCPPGASQ 384
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 28.7 bits (61), Expect = 2.8
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 322 YCHLRSGRGCPDCWCPPGASQ 384
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
>U88308-4|AAB42323.1| 299|Caenorhabditis elegans Hypothetical
protein C32E8.5 protein.
Length = 299
Score = 28.3 bits (60), Expect = 3.7
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -2
Query: 451 SQTRESYSQTSTQVDE-PFVKGVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDRLHDQLR 275
S++R+ ++ T+ D+ P +K V E S+ DS + D R DDR D D R
Sbjct: 24 SRSRDRQTRRDTRRDDSPKIKREVKE--EQFSDNDSPRRRRDDRGGRRDDRRDNRRDDRR 81
Query: 274 PH 269
H
Sbjct: 82 DH 83
>AF039050-10|AAC47933.2| 362|Caenorhabditis elegans Seven tm
receptor protein 82 protein.
Length = 362
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 272 RPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPANYPLY 397
RPE ++ +VMA + AIY + +++ L NY LY
Sbjct: 35 RPEYGSYKLLMMVMATLYAIYSAIEVIILPSYLVFEYNYLLY 76
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein
W01F3.3 protein.
Length = 2175
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = +1
Query: 325 CHLRSGR-GCPDCWCPPGASQLPP 393
C L + R GCP C CPP PP
Sbjct: 933 CQLVNDRSGCPFCSCPPVKQASPP 956
>Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical
protein F40E10.1 protein.
Length = 605
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 304 CRHGGYYCHLRSGRGCPDCWCPPG-ASQLPPLQRVHPLGCWFG 429
C++GGY + C +C CPPG QL + + GC G
Sbjct: 331 CQNGGYI----NPNDCNNCKCPPGFGGQLCDVAGTNSNGCGAG 369
>D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein.
Length = 605
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 304 CRHGGYYCHLRSGRGCPDCWCPPG-ASQLPPLQRVHPLGCWFG 429
C++GGY + C +C CPPG QL + + GC G
Sbjct: 331 CQNGGYI----NPNDCNNCKCPPGFGGQLCDVAGTNSNGCGAG 369
>AF099923-3|AAN63403.1| 784|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform c protein.
Length = 784
Score = 27.9 bits (59), Expect = 4.9
Identities = 16/61 (26%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = -2
Query: 499 STTHACISHD-AYGETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTVDGN 323
S H + D Y ET SQT + + T V E N+D D +
Sbjct: 570 SAIHTVVKSDWNYSETSSQTEKPFDPTDGPPSYEIANSFVQIAFENEQNEDHFDTEISRQ 629
Query: 322 N 320
N
Sbjct: 630 N 630
>AF099923-2|AAM48544.1| 814|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform a protein.
Length = 814
Score = 27.9 bits (59), Expect = 4.9
Identities = 16/61 (26%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = -2
Query: 499 STTHACISHD-AYGETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTVDGN 323
S H + D Y ET SQT + + T V E N+D D +
Sbjct: 570 SAIHTVVKSDWNYSETSSQTEKPFDPTDGPPSYEIANSFVQIAFENEQNEDHFDTEISRQ 629
Query: 322 N 320
N
Sbjct: 630 N 630
>AF099923-1|AAM48545.1| 853|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform b protein.
Length = 853
Score = 27.9 bits (59), Expect = 4.9
Identities = 16/61 (26%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = -2
Query: 499 STTHACISHD-AYGETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTVDGN 323
S H + D Y ET SQT + + T V E N+D D +
Sbjct: 609 SAIHTVVKSDWNYSETSSQTEKPFDPTDGPPSYEIANSFVQIAFENEQNEDHFDTEISRQ 668
Query: 322 N 320
N
Sbjct: 669 N 669
>Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -3
Query: 492 RTPASPTMXMAKPAARPENXTAKPAPK 412
+TPA PT +AKPA +P +A PAPK
Sbjct: 47 KTPARPT--VAKPAPKPTPKSA-PAPK 70
>AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -3
Query: 492 RTPASPTMXMAKPAARPENXTAKPAPK 412
+TPA PT +AKPA +P +A PAPK
Sbjct: 47 KTPARPT--VAKPAPKPTPKSA-PAPK 70
>Z82286-5|CAB05311.1| 130|Caenorhabditis elegans Hypothetical
protein W02A2.8 protein.
Length = 130
Score = 27.1 bits (57), Expect = 8.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 6/38 (15%)
Frame = +1
Query: 283 DHEVDHSCRHGGY-YCHLR-----SGRGCPDCWCPPGA 378
DH+VD + YCHLR + R CPD W GA
Sbjct: 42 DHDVDRTIYDIPLEYCHLRIPKSRTSRSCPDPWRRYGA 79
>U97005-9|AAK72085.1| 829|Caenorhabditis elegans Hypothetical
protein F19F10.9 protein.
Length = 829
Score = 27.1 bits (57), Expect = 8.6
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = -2
Query: 412 VDEPFVKGVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDRLHDQLRPHHR 263
+ P K G L+ N+ + Q +DG DDRN + D+L HR
Sbjct: 676 LQNPNAKSHSGPSLDHLKNKTT--QRIDGQRFDPDDRNAKKADRLNSQHR 723
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,318,283
Number of Sequences: 27780
Number of extensions: 298125
Number of successful extensions: 955
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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