Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc25e14
(282 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00033-12|AAC48297.2| 88|Caenorhabditis elegans Ribosomal prot... 73 3e-14
Z49909-3|CAA90107.2| 603|Caenorhabditis elegans Hypothetical pr... 27 2.1
AF024502-3|AAB70373.1| 836|Caenorhabditis elegans Hypothetical ... 27 2.1
Z73103-3|CAA97423.1| 540|Caenorhabditis elegans Hypothetical pr... 27 2.7
Z81523-2|CAB04248.1| 928|Caenorhabditis elegans Hypothetical pr... 26 4.8
Z81523-1|CAB04241.1| 944|Caenorhabditis elegans Hypothetical pr... 26 4.8
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr... 26 4.8
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 26 4.8
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ... 26 4.8
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 26 4.8
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 26 4.8
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 26 4.8
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 26 4.8
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 26 4.8
Z50874-1|CAA90763.1| 377|Caenorhabditis elegans Hypothetical pr... 25 6.3
U97002-11|AAY86259.1| 121|Caenorhabditis elegans Hypothetical p... 25 6.3
AL117195-4|CAB55010.1| 571|Caenorhabditis elegans Hypothetical ... 25 8.4
>U00033-12|AAC48297.2| 88|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 21 protein.
Length = 88
Score = 72.9 bits (171), Expect = 3e-14
Identities = 33/54 (61%), Positives = 38/54 (70%)
Frame = +3
Query: 54 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKINY 215
MQNDAG+ V+LY PRKCS+SNR+I KDHASVQ+ DVDP TGR Y
Sbjct: 1 MQNDAGQTVELYVPRKCSSSNRIIGPKDHASVQIDFVDVDPETGRMIPGKSTRY 54
>Z49909-3|CAA90107.2| 603|Caenorhabditis elegans Hypothetical
protein C14A4.3 protein.
Length = 603
Score = 27.1 bits (57), Expect = 2.1
Identities = 12/51 (23%), Positives = 23/51 (45%)
Frame = +3
Query: 9 FRICQFRVPCGRTYKMQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVI 161
F +C + RTY + N+ G V++Y +NR H +++ +
Sbjct: 408 FILCFAILSASRTYSIHNNYGSHVEIYRSLNAELTNRTNFKNFHDPIRVCV 458
>AF024502-3|AAB70373.1| 836|Caenorhabditis elegans Hypothetical
protein M151.3 protein.
Length = 836
Score = 27.1 bits (57), Expect = 2.1
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +3
Query: 126 HAKDHASVQLVIADVDPATGRAADTSKINY*HLVRQTTIL*DKIKSK 266
H D A + L AD+DP +AA +K H++R ++ D +K K
Sbjct: 544 HLSDPAMIPL--ADLDPMICQAASITKPVSKHIMRTRSLTQDSVKVK 588
>Z73103-3|CAA97423.1| 540|Caenorhabditis elegans Hypothetical
protein C08F8.4 protein.
Length = 540
Score = 26.6 bits (56), Expect = 2.7
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = -3
Query: 139 WSLAWMRRLLAEHFLGQYKS 80
W++AW+RR++ E G Y++
Sbjct: 359 WTVAWLRRVVYERVEGPYRT 378
>Z81523-2|CAB04248.1| 928|Caenorhabditis elegans Hypothetical
protein F32H2.1b protein.
Length = 928
Score = 25.8 bits (54), Expect = 4.8
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +1
Query: 43 VHIKCRTTPVNSLTCTARGNARPATASSTLRTMLQ 147
+H+ ++ N + C A+ P AS L MLQ
Sbjct: 695 LHVNSKSCNQNDVHCPAKSTLPPTAASFDLHKMLQ 729
>Z81523-1|CAB04241.1| 944|Caenorhabditis elegans Hypothetical
protein F32H2.1a protein.
Length = 944
Score = 25.8 bits (54), Expect = 4.8
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +1
Query: 43 VHIKCRTTPVNSLTCTARGNARPATASSTLRTMLQ 147
+H+ ++ N + C A+ P AS L MLQ
Sbjct: 695 LHVNSKSCNQNDVHCPAKSTLPPTAASFDLHKMLQ 729
>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 25.8 bits (54), Expect = 4.8
Identities = 11/47 (23%), Positives = 22/47 (46%)
Frame = -3
Query: 175 GSTSAITSCTEAWSLAWMRRLLAEHFLGQYKSTNSPASFCILYVRPH 35
GS S C AW W++ E + + + N+ ++ +L +P+
Sbjct: 808 GSNSLYCDCNMAWFSKWIKSKFIEAGIARCEYPNTVSNQLLLTAQPY 854
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = +1
Query: 40 DVHIKCRTTPVNSLTCTARG--NARPATASSTLRTM 141
++H+ R TPVN T N RP S ++T+
Sbjct: 839 NIHVDLRATPVNDPTMVIEWFVNGRPLLTGSRVKTL 874
Score = 25.0 bits (52), Expect = 8.4
Identities = 9/21 (42%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +1
Query: 16 SVNSVYRVD-VHIKCRTTPVN 75
SV ++ D +H++CR TP+N
Sbjct: 3191 SVENILEGDSIHLECRVTPIN 3211
>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 25.8 bits (54), Expect = 4.8
Identities = 11/47 (23%), Positives = 22/47 (46%)
Frame = -3
Query: 175 GSTSAITSCTEAWSLAWMRRLLAEHFLGQYKSTNSPASFCILYVRPH 35
GS S C AW W++ E + + + N+ ++ +L +P+
Sbjct: 808 GSNSLYCDCNMAWFSKWIKSKFIEAGIARCEYPNTVSNQLLLTAQPY 854
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform b
protein.
Length = 4203
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = +1
Query: 40 DVHIKCRTTPVNSLTCTARG--NARPATASSTLRTM 141
++H+ R TPVN T N RP S ++T+
Sbjct: 756 NIHVDLRATPVNDPTMVIEWFVNGRPLLTGSRVKTL 791
Score = 25.0 bits (52), Expect = 8.4
Identities = 9/21 (42%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +1
Query: 16 SVNSVYRVD-VHIKCRTTPVN 75
SV ++ D +H++CR TP+N
Sbjct: 3108 SVENILEGDSIHLECRVTPIN 3128
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4488
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = +1
Query: 40 DVHIKCRTTPVNSLTCTARG--NARPATASSTLRTM 141
++H+ R TPVN T N RP S ++T+
Sbjct: 1077 NIHVDLRATPVNDPTMVIEWFVNGRPLLTGSRVKTL 1112
Score = 25.0 bits (52), Expect = 8.4
Identities = 9/21 (42%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +1
Query: 16 SVNSVYRVD-VHIKCRTTPVN 75
SV ++ D +H++CR TP+N
Sbjct: 3429 SVENILEGDSIHLECRVTPIN 3449
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform d protein.
Length = 4369
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = +1
Query: 40 DVHIKCRTTPVNSLTCTARG--NARPATASSTLRTM 141
++H+ R TPVN T N RP S ++T+
Sbjct: 1077 NIHVDLRATPVNDPTMVIEWFVNGRPLLTGSRVKTL 1112
Score = 25.0 bits (52), Expect = 8.4
Identities = 9/21 (42%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +1
Query: 16 SVNSVYRVD-VHIKCRTTPVN 75
SV ++ D +H++CR TP+N
Sbjct: 3429 SVENILEGDSIHLECRVTPIN 3449
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform c protein.
Length = 4447
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = +1
Query: 40 DVHIKCRTTPVNSLTCTARG--NARPATASSTLRTM 141
++H+ R TPVN T N RP S ++T+
Sbjct: 1077 NIHVDLRATPVNDPTMVIEWFVNGRPLLTGSRVKTL 1112
Score = 25.0 bits (52), Expect = 8.4
Identities = 9/21 (42%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +1
Query: 16 SVNSVYRVD-VHIKCRTTPVN 75
SV ++ D +H++CR TP+N
Sbjct: 3429 SVENILEGDSIHLECRVTPIN 3449
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = +1
Query: 40 DVHIKCRTTPVNSLTCTARG--NARPATASSTLRTM 141
++H+ R TPVN T N RP S ++T+
Sbjct: 756 NIHVDLRATPVNDPTMVIEWFVNGRPLLTGSRVKTL 791
Score = 25.0 bits (52), Expect = 8.4
Identities = 9/21 (42%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +1
Query: 16 SVNSVYRVD-VHIKCRTTPVN 75
SV ++ D +H++CR TP+N
Sbjct: 3124 SVENILEGDSIHLECRVTPIN 3144
>Z50874-1|CAA90763.1| 377|Caenorhabditis elegans Hypothetical
protein R10E4.1 protein.
Length = 377
Score = 25.4 bits (53), Expect = 6.3
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Frame = +1
Query: 1 DLSFASVNSVYRVDVHIKCRTTPV----NSLTCTARGNARPATASS 126
DL + VYR +H+KC + NS C A PAT S+
Sbjct: 29 DLVLDEEHKVYRYWIHLKCMKWQIELRANSFECFAAYFKTPATWSA 74
>U97002-11|AAY86259.1| 121|Caenorhabditis elegans Hypothetical
protein K09H11.11 protein.
Length = 121
Score = 25.4 bits (53), Expect = 6.3
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2
Query: 107 GQQPPHPR*GPCF 145
GQQPPHP+ P F
Sbjct: 19 GQQPPHPQIDPLF 31
>AL117195-4|CAB55010.1| 571|Caenorhabditis elegans Hypothetical
protein Y57A10A.5 protein.
Length = 571
Score = 25.0 bits (52), Expect = 8.4
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -2
Query: 113 AGRAFPRAVQVNEFTGVVLHFICTSTRYTELTDAKER 3
A A RA+ +++F V+ FIC R TEL + K++
Sbjct: 430 ATSAESRAIYMHDFLKEVIEFICFLER-TELIEIKKQ 465
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,840,322
Number of Sequences: 27780
Number of extensions: 95707
Number of successful extensions: 288
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 288
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 259761072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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