Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc25e11
         (509 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2AB74 Cluster: Bitter taste receptor; n=1; Xenopus tro...    33   5.0  
UniRef50_A5AB09 Cluster: Putative uncharacterized protein; n=1; ...    32   8.7  

>UniRef50_Q2AB74 Cluster: Bitter taste receptor; n=1; Xenopus
           tropicalis|Rep: Bitter taste receptor - Xenopus
           tropicalis (Western clawed frog) (Silurana tropicalis)
          Length = 300

 Score = 32.7 bits (71), Expect = 5.0
 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = +2

Query: 356 LLKFGM*KIRCNTYIFNAKYDF---WLVFWYLILKKIFISVNKKPYYL 490
           L+ F    I C  Y+F    D+   W+  W  +L  + I+++K+P+ L
Sbjct: 67  LIPFSAFGIYCIFYVFELSLDYFSRWVAMWLSVLYFVMITISKQPFML 114


>UniRef50_A5AB09 Cluster: Putative uncharacterized protein; n=1;
           Aspergillus niger|Rep: Putative uncharacterized protein
           - Aspergillus niger
          Length = 398

 Score = 31.9 bits (69), Expect = 8.7
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +1

Query: 187 GWAGARLITPPSSQHAPH*LTVSLQKRGVLQWI 285
           GW   + ++P SSQHA H + +S   RG L W+
Sbjct: 366 GWPAGQTLSPDSSQHARHHIGIS---RGHLSWL 395


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 444,338,820
Number of Sequences: 1657284
Number of extensions: 8207768
Number of successful extensions: 13348
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13347
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30946432294
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)