BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc25e03
(369 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 27 0.17
AY943929-1|AAX49502.1| 755|Anopheles gambiae laccase-2 isoform ... 23 3.6
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 22 6.4
DQ986315-1|ABK59975.1| 504|Anopheles gambiae catalase protein. 22 8.4
DQ980210-1|ABL09378.1| 504|Anopheles gambiae catalase protein. 22 8.4
DQ980209-1|ABL09377.1| 504|Anopheles gambiae catalase protein. 22 8.4
DQ980208-1|ABL09376.1| 504|Anopheles gambiae catalase protein. 22 8.4
DQ980207-1|ABL09375.1| 504|Anopheles gambiae catalase protein. 22 8.4
DQ980206-1|ABL09374.1| 504|Anopheles gambiae catalase protein. 22 8.4
DQ980205-1|ABL09373.1| 504|Anopheles gambiae catalase protein. 22 8.4
DQ980204-1|ABL09372.1| 504|Anopheles gambiae catalase protein. 22 8.4
DQ980203-1|ABL09371.1| 504|Anopheles gambiae catalase protein. 22 8.4
DQ980202-1|ABL09370.1| 504|Anopheles gambiae catalase protein. 22 8.4
DQ980201-1|ABL09369.1| 504|Anopheles gambiae catalase protein. 22 8.4
DQ980200-1|ABL09368.1| 504|Anopheles gambiae catalase protein. 22 8.4
DQ980199-1|ABL09367.1| 504|Anopheles gambiae catalase protein. 22 8.4
AY505416-1|AAR90327.1| 485|Anopheles gambiae catalase 1 protein. 22 8.4
AF004915-1|AAB94671.1| 688|Anopheles gambiae pro-phenol oxidase... 22 8.4
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 27.5 bits (58), Expect = 0.17
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Frame = +3
Query: 201 QNGSRLSPEKQEMTFISQLRSP----LIDTGHLCLPCSRLLK 314
Q+ L+P K EMT IS L+ P ID +P SR +K
Sbjct: 710 QHHLELAPAKTEMTIISSLKHPPSHISIDVRGTAVPYSRSIK 751
>AY943929-1|AAX49502.1| 755|Anopheles gambiae laccase-2 isoform B
protein.
Length = 755
Score = 23.0 bits (47), Expect = 3.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 226 SGDNRDPFCTRDC*QSESKIFRPLN 152
+GDNR P C +C K+ PLN
Sbjct: 596 NGDNRPPDCGPNC-MCTHKVDIPLN 619
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 22.2 bits (45), Expect = 6.4
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 201 QNGSRLSPEKQEMTFISQLRSP 266
Q+G L+P K E IS ++P
Sbjct: 751 QHGLELAPAKTEAVLISSKKTP 772
>DQ986315-1|ABK59975.1| 504|Anopheles gambiae catalase protein.
Length = 504
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 319 PRFSSREHGRQRCPVSISGDLS 254
P+ R H Q P+ +SGD++
Sbjct: 408 PQTCPRAHKLQNTPLKLSGDVN 429
>DQ980210-1|ABL09378.1| 504|Anopheles gambiae catalase protein.
Length = 504
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 319 PRFSSREHGRQRCPVSISGDLS 254
P+ R H Q P+ +SGD++
Sbjct: 408 PQTCPRAHKLQNTPLKLSGDVN 429
>DQ980209-1|ABL09377.1| 504|Anopheles gambiae catalase protein.
Length = 504
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 319 PRFSSREHGRQRCPVSISGDLS 254
P+ R H Q P+ +SGD++
Sbjct: 408 PQTCPRAHKLQNTPLKLSGDVN 429
>DQ980208-1|ABL09376.1| 504|Anopheles gambiae catalase protein.
Length = 504
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 319 PRFSSREHGRQRCPVSISGDLS 254
P+ R H Q P+ +SGD++
Sbjct: 408 PQTCPRAHKLQNTPLKLSGDVN 429
>DQ980207-1|ABL09375.1| 504|Anopheles gambiae catalase protein.
Length = 504
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 319 PRFSSREHGRQRCPVSISGDLS 254
P+ R H Q P+ +SGD++
Sbjct: 408 PQTCPRAHKLQNTPLKLSGDVN 429
>DQ980206-1|ABL09374.1| 504|Anopheles gambiae catalase protein.
Length = 504
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 319 PRFSSREHGRQRCPVSISGDLS 254
P+ R H Q P+ +SGD++
Sbjct: 408 PQTCPRAHKLQNTPLKLSGDVN 429
>DQ980205-1|ABL09373.1| 504|Anopheles gambiae catalase protein.
Length = 504
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 319 PRFSSREHGRQRCPVSISGDLS 254
P+ R H Q P+ +SGD++
Sbjct: 408 PQTCPRAHKLQNTPLKLSGDVN 429
>DQ980204-1|ABL09372.1| 504|Anopheles gambiae catalase protein.
Length = 504
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 319 PRFSSREHGRQRCPVSISGDLS 254
P+ R H Q P+ +SGD++
Sbjct: 408 PQTCPRAHKLQNTPLKLSGDVN 429
>DQ980203-1|ABL09371.1| 504|Anopheles gambiae catalase protein.
Length = 504
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 319 PRFSSREHGRQRCPVSISGDLS 254
P+ R H Q P+ +SGD++
Sbjct: 408 PQTCPRAHKLQNTPLKLSGDVN 429
>DQ980202-1|ABL09370.1| 504|Anopheles gambiae catalase protein.
Length = 504
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 319 PRFSSREHGRQRCPVSISGDLS 254
P+ R H Q P+ +SGD++
Sbjct: 408 PQTCPRAHKLQNTPLKLSGDVN 429
>DQ980201-1|ABL09369.1| 504|Anopheles gambiae catalase protein.
Length = 504
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 319 PRFSSREHGRQRCPVSISGDLS 254
P+ R H Q P+ +SGD++
Sbjct: 408 PQTCPRAHKLQNTPLKLSGDVN 429
>DQ980200-1|ABL09368.1| 504|Anopheles gambiae catalase protein.
Length = 504
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 319 PRFSSREHGRQRCPVSISGDLS 254
P+ R H Q P+ +SGD++
Sbjct: 408 PQTCPRAHKLQNTPLKLSGDVN 429
>DQ980199-1|ABL09367.1| 504|Anopheles gambiae catalase protein.
Length = 504
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 319 PRFSSREHGRQRCPVSISGDLS 254
P+ R H Q P+ +SGD++
Sbjct: 408 PQTCPRAHKLQNTPLKLSGDVN 429
>AY505416-1|AAR90327.1| 485|Anopheles gambiae catalase 1 protein.
Length = 485
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 319 PRFSSREHGRQRCPVSISGDLS 254
P+ R H Q P+ +SGD++
Sbjct: 392 PQTCPRAHKLQNTPLKLSGDVN 413
>AF004915-1|AAB94671.1| 688|Anopheles gambiae pro-phenol oxidase
subunit 1 protein.
Length = 688
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 54 YFV*FTSNTANVNPSHNTAV 113
YF+ ++T +NP NT V
Sbjct: 526 YFIEMDTSTVTLNPGMNTIV 545
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 371,092
Number of Sequences: 2352
Number of extensions: 7647
Number of successful extensions: 23
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27944475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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