BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc25e03
(369 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR848842-1|CAM45845.1| 101|Homo sapiens calpain 8 protein. 29 3.5
BC131505-1|AAI31506.1| 1461|Homo sapiens KIAA0922 protein. 28 8.2
BC044932-1|AAH44932.1| 1387|Homo sapiens KIAA0922 protein protein. 28 8.2
BC021232-1|AAH21232.1| 292|Homo sapiens Unknown (protein for IM... 28 8.2
AB023139-1|BAA76766.1| 790|Homo sapiens KIAA0922 protein protein. 28 8.2
>CR848842-1|CAM45845.1| 101|Homo sapiens calpain 8 protein.
Length = 101
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +2
Query: 194 TCAEWISIVARETRDDFYKPAKISAY*HWTSLPSVLTATETWP 322
TC E IS++ ET+D P + W + +L WP
Sbjct: 32 TCREMISLLDEETQDTMQVPDSSETF--WNTEADILDTVRRWP 72
>BC131505-1|AAI31506.1| 1461|Homo sapiens KIAA0922 protein.
Length = 1461
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 87 VNPSHNTAVCIQKLQK*GPKKQFNGRNILLSLC*QSRVQNGSRLSP 224
++P + C L GP + G+N L QSR+QN ++ SP
Sbjct: 775 ISPHSYKSNCKNFLDTYGPSDKGRGKNCLPVNTPQSRIQNAAKRSP 820
>BC044932-1|AAH44932.1| 1387|Homo sapiens KIAA0922 protein protein.
Length = 1387
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 87 VNPSHNTAVCIQKLQK*GPKKQFNGRNILLSLC*QSRVQNGSRLSP 224
++P + C L GP + G+N L QSR+QN ++ SP
Sbjct: 701 ISPHSYKSNCKNFLDTYGPSDKGRGKNCLPVNTPQSRIQNAAKRSP 746
>BC021232-1|AAH21232.1| 292|Homo sapiens Unknown (protein for
IMAGE:4120623) protein.
Length = 292
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 87 VNPSHNTAVCIQKLQK*GPKKQFNGRNILLSLC*QSRVQNGSRLSP 224
++P + C L GP + G+N L QSR+QN ++ SP
Sbjct: 91 ISPHSYKSNCKNFLDTYGPSDKGRGKNCLPVNTPQSRIQNAAKRSP 136
>AB023139-1|BAA76766.1| 790|Homo sapiens KIAA0922 protein protein.
Length = 790
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 87 VNPSHNTAVCIQKLQK*GPKKQFNGRNILLSLC*QSRVQNGSRLSP 224
++P + C L GP + G+N L QSR+QN ++ SP
Sbjct: 104 ISPHSYKSNCKNFLDTYGPSDKGRGKNCLPVNTPQSRIQNAAKRSP 149
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,015,776
Number of Sequences: 237096
Number of extensions: 985785
Number of successful extensions: 1852
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1852
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2363825726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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