Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc25e03
         (369 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001281-1|AAN71037.1|  397|Drosophila melanogaster AT07872p pro...    27   7.7  
AE014297-3231|AAF56061.2|  397|Drosophila melanogaster CG31139-P...    27   7.7  
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    27   7.7  

>BT001281-1|AAN71037.1|  397|Drosophila melanogaster AT07872p
           protein.
          Length = 397

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 207 GSRLSPEKQEMTFISQLRSPLIDTGHLCL 293
           GSR SPE+  +  +SQ R  L+D  +  L
Sbjct: 219 GSRSSPERDSLVRLSQRRPDLVDAQYTIL 247


>AE014297-3231|AAF56061.2|  397|Drosophila melanogaster CG31139-PA
           protein.
          Length = 397

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 207 GSRLSPEKQEMTFISQLRSPLIDTGHLCL 293
           GSR SPE+  +  +SQ R  L+D  +  L
Sbjct: 219 GSRSSPERDSLVRLSQRRPDLVDAQYTIL 247


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
            protein.
          Length = 23015

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 112  CVFKSCKNKARKSNLTAGISYFRFASNHVCRMDLDCR 222
            C+   C+    KSN  +    F+F SN++C  +L+CR
Sbjct: 2594 CLQGVCQGTC-KSN--SSCPQFQFCSNNICTKELECR 2627


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,467,130
Number of Sequences: 53049
Number of extensions: 287121
Number of successful extensions: 568
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 568
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 964005624
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)