Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc25d21
(593 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 220 1e-58
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 132 4e-32
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 124 1e-29
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 118 5e-28
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 117 1e-27
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 107 1e-24
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 100 3e-22
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 99 6e-22
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 56 5e-09
SPBC947.05c |||ferric-chelate reductase |Schizosaccharomyces pom... 29 0.39
SPBC30D10.03c |||IMP 5'-nucleotidase |Schizosaccharomyces pombe|... 28 0.89
SPAC959.03c |||U3 snoRNP-associated protein Utp7|Schizosaccharom... 26 3.6
SPAC1782.04 |cox24||mitochondrial mRNA processing protein Cox24 ... 25 8.3
SPAC144.10c |gwt1|mug59|pig-W|Schizosaccharomyces pombe|chr 1|||... 25 8.3
SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr 1|... 25 8.3
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 220 bits (538), Expect = 1e-58
Identities = 100/144 (69%), Positives = 126/144 (87%)
Frame = +3
Query: 141 DEYGRPFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVT 320
D+ G PFI++RDQ++++RL G DA+KSHI A + +A+ +RTSLGPRGLDK+++S DG++T
Sbjct: 12 DDQGNPFILVRDQEKKRRLHGIDAVKSHILATKTVANIVRTSLGPRGLDKILISPDGEIT 71
Query: 321 VTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIH 500
VTNDGATIL M+VEHQI KLLVQL++SQDDEIGDGTTGVVVLAGALLEQA L+DKGIH
Sbjct: 72 VTNDGATILDQMEVEHQIAKLLVQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIH 131
Query: 501 PIRIADGYEMAAALALTHLDSVSE 572
PIRIADGYE A +A+ HLD++S+
Sbjct: 132 PIRIADGYEKACQVAVKHLDAISD 155
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 132 bits (319), Expect = 4e-32
Identities = 62/126 (49%), Positives = 87/126 (69%)
Frame = +3
Query: 189 KRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEH 368
++++G D ++ A IA+ +++SLGP GLDK++V GDVTVTNDGATIL ++DVEH
Sbjct: 15 EKISGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEH 74
Query: 369 QIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALAL 548
GK+LV+LAQ QD E+GDGTT VV++A LL +A+ L+ IHP I GY +A A+
Sbjct: 75 PAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAV 134
Query: 549 THLDSV 566
+ V
Sbjct: 135 KFMTDV 140
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 124 bits (298), Expect = 1e-29
Identities = 62/124 (50%), Positives = 85/124 (68%)
Frame = +3
Query: 177 QDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMM 356
QDR+K + S+I AAR +A +RTSLGP+G+DK++ + G+V +TNDGATILK +
Sbjct: 12 QDREKP---QEVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHL 68
Query: 357 DVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHPIRIADGYEMAA 536
V H K+LV L+ +QD E GDGTT VV+LAG++L A LL KGIHP IA+ ++ AA
Sbjct: 69 SVLHPAAKMLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAA 128
Query: 537 ALAL 548
+
Sbjct: 129 GFTV 132
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 118 bits (285), Expect = 5e-28
Identities = 58/138 (42%), Positives = 86/138 (62%)
Frame = +3
Query: 156 PFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDG 335
P I+L++ + G + S+I A + T+RT+LGP G DKLMV G+V ++NDG
Sbjct: 9 PVIVLKEGTDDSQ--GRGQLLSNINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISNDG 66
Query: 336 ATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHPIRIA 515
ATI+K++D+ H K LV +A++QD E+GDGTT VVV AG LL +A ++ G+ I
Sbjct: 67 ATIMKLLDIVHPAAKTLVDIARAQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLII 126
Query: 516 DGYEMAAALALTHLDSVS 569
GY AA LA+ + ++
Sbjct: 127 RGYRKAAQLAVNKIKEIA 144
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 117 bits (281), Expect = 1e-27
Identities = 57/132 (43%), Positives = 88/132 (66%)
Frame = +3
Query: 192 RLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQ 371
R G A S+IQAA+ +A +RT LGPR + K+++ G V +TNDG IL+ ++V H
Sbjct: 14 RQVGHKAQMSNIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTNDGHAILREIEVAHP 73
Query: 372 IGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALT 551
K +++LA++QD+E+GDGTT V++LAG +L AS LLD+ IHP+ + ++ A AL+
Sbjct: 74 AAKSMIELARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMIRSFKQALEDALS 133
Query: 552 HLDSVSEAFPVN 587
+D ++ PVN
Sbjct: 134 IIDEIT--LPVN 143
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 107 bits (257), Expect = 1e-24
Identities = 58/139 (41%), Positives = 86/139 (61%), Gaps = 1/139 (0%)
Frame = +3
Query: 156 PFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVS-SDGDVTVTND 332
P I + Q+R G +A S A + ++++LGP+G+DK++ S S GD+ VTND
Sbjct: 5 PHQIFNESGIQER--GENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTND 62
Query: 333 GATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHPIRI 512
GATILK + +++ K+LV +++ QDDE+GDGTT V V A LL QA +++ IHP I
Sbjct: 63 GATILKSIALDNAAAKVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVI 122
Query: 513 ADGYEMAAALALTHLDSVS 569
DGY +A A+ L + S
Sbjct: 123 IDGYRIATKTAIDALRASS 141
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 99.5 bits (237), Expect = 3e-22
Identities = 48/127 (37%), Positives = 76/127 (59%)
Frame = +3
Query: 210 AIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQIGKLLV 389
A++ +I AA + L+++LGP G K++V G + +T DG +L M +++ +
Sbjct: 17 ALQVNISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLTEMQIQNPTASCIA 76
Query: 390 QLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVS 569
+ A +QDD GDGTT V +L G LL+QA + +G+HP I+DG+ +A ALT LDS
Sbjct: 77 KAATAQDDATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNLAKNEALTFLDSFK 136
Query: 570 EAFPVNK 590
F V++
Sbjct: 137 TDFEVDR 143
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 98.7 bits (235), Expect = 6e-22
Identities = 47/120 (39%), Positives = 74/120 (61%)
Frame = +3
Query: 207 DAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQIGKLL 386
DA+ + A R+++ RTSLGP G +K++V+ +TND ATI++ ++V H KL+
Sbjct: 26 DAVIRNCNAIRELSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATIIRELEVIHPAAKLV 85
Query: 387 VQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSV 566
V Q Q++E+GD VVV G LL +A N++ G+ P+ IA GYEMA + + L+ +
Sbjct: 86 VDATQQQENELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGYEMALSHTMEVLEEI 145
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 55.6 bits (128), Expect = 5e-09
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
Frame = +3
Query: 201 GTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATI---LKMMDVEHQ 371
G DA S + +A + +LGP+G + L+ G +T DG T+ + + D
Sbjct: 40 GVDARASLLTGVDTLARAVSVTLGPKGRNVLIDQPFGSPKITKDGVTVARSVSLKDKFEN 99
Query: 372 IGKLLVQLAQSQDDEI-GDGTTGVVVLAGALLEQASNLLDKGIHPIRIADGYEMA 533
+G LVQ S+ +E+ GDGTT VL A+ + + G +P+ + G ++A
Sbjct: 100 LGARLVQDVASKTNEVAGDGTTTATVLTRAIFSETVRNVAAGCNPMDLRRGIQLA 154
>SPBC947.05c |||ferric-chelate reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 564
Score = 29.5 bits (63), Expect = 0.39
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1
Query: 376 VNYLCNWLRVKMTKLVMVPQGLLFLLVHSLSKPQICWTKVSI 501
+NYL WL V L+ V G+LF++ + S + + K+SI
Sbjct: 146 MNYLHRWLSVYAV-LISVLHGILFMIFSAQSYKPLLYDKISI 186
>SPBC30D10.03c |||IMP 5'-nucleotidase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 405
Score = 28.3 bits (60), Expect = 0.89
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +3
Query: 267 LGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQIGKLL 386
L GLD MVS DGDVT+ DG +L V ++ +LL
Sbjct: 136 LADNGLD--MVSFDGDVTLYEDGQPLLPDNPVISRLIQLL 173
>SPAC959.03c |||U3 snoRNP-associated protein
Utp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 520
Score = 26.2 bits (55), Expect = 3.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 260 AKSACNLSGCLYM*LYGIGTGKSFLSILIP 171
+ S +L C Y + GIG K F SI++P
Sbjct: 350 SSSVVDLHYCPYEDILGIGHAKGFESIIVP 379
>SPAC1782.04 |cox24||mitochondrial mRNA processing protein Cox24
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 175
Score = 25.0 bits (52), Expect = 8.3
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -1
Query: 56 CSPQVQNKTQILQSQ 12
C P+V++KTQ+ QSQ
Sbjct: 72 CVPKVESKTQVSQSQ 86
>SPAC144.10c |gwt1|mug59|pig-W|Schizosaccharomyces pombe|chr
1|||Manual
Length = 459
Score = 25.0 bits (52), Expect = 8.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 358 TLSIRLVNYLCNWLRVKMTKLVMVPQGLLFLLV 456
T + L+ CN L V MT ++P+G L LV
Sbjct: 22 TCGLLLIGIACNVLWVNMTARNILPKGNLGFLV 54
>SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1036
Score = 25.0 bits (52), Expect = 8.3
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = -2
Query: 367 CSTSIIFRIVAPSFVTVTSPSDD--TISLSRP-RGPR--DVRRVLAICRAACICDFMASV 203
CST++ + I P TV S+D T S+S GP D V AI +C+F++
Sbjct: 252 CSTNVDYTIPEPILKTVKFSSEDEYTGSVSLAWNGPSALDAYTVFAI---ETLCEFLSES 308
Query: 202 PVSLF 188
VS F
Sbjct: 309 AVSPF 313
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,441,781
Number of Sequences: 5004
Number of extensions: 49447
Number of successful extensions: 140
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 139
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 258201856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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