Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc25d21
(593 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 228 3e-60
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 228 3e-60
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 228 3e-60
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 140 9e-34
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 140 9e-34
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 131 3e-31
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 131 3e-31
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 118 3e-27
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 118 3e-27
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 108 3e-24
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 108 3e-24
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 108 3e-24
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 107 6e-24
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 101 4e-22
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 101 4e-22
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 99 1e-21
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 60 1e-09
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 54 1e-07
Z81062-1|CAB02945.2| 365|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z79752-6|CAB02080.2| 423|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z81138-2|CAB03473.1| 2265|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical pr... 27 7.6
U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical pr... 27 7.6
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 27 7.6
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 228 bits (557), Expect = 3e-60
Identities = 103/158 (65%), Positives = 134/158 (84%)
Frame = +3
Query: 111 MALFPGSVAFDEYGRPFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDK 290
MA + FDE G+PFI++R+Q+ QKR+TG +A+KSHI AAR +A+TLRTSLGPRGLDK
Sbjct: 1 MAQSSAQLLFDESGQPFIVMREQENQKRITGVEAVKSHILAARAVANTLRTSLGPRGLDK 60
Query: 291 LMVSSDGDVTVTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQ 470
++VS DGDVT+TNDGATI++ MDV+H + KL+V+L++SQD EIGDGTTGVVVLAGALLE+
Sbjct: 61 MLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEE 120
Query: 471 ASNLLDKGIHPIRIADGYEMAAALALTHLDSVSEAFPV 584
A L+D+GIHPI+IADG+++A AL LDS+S+ FPV
Sbjct: 121 AEKLIDRGIHPIKIADGFDLACKKALETLDSISDKFPV 158
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 228 bits (557), Expect = 3e-60
Identities = 103/158 (65%), Positives = 134/158 (84%)
Frame = +3
Query: 111 MALFPGSVAFDEYGRPFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDK 290
MA + FDE G+PFI++R+Q+ QKR+TG +A+KSHI AAR +A+TLRTSLGPRGLDK
Sbjct: 1 MAQSSAQLLFDESGQPFIVMREQENQKRITGVEAVKSHILAARAVANTLRTSLGPRGLDK 60
Query: 291 LMVSSDGDVTVTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQ 470
++VS DGDVT+TNDGATI++ MDV+H + KL+V+L++SQD EIGDGTTGVVVLAGALLE+
Sbjct: 61 MLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEE 120
Query: 471 ASNLLDKGIHPIRIADGYEMAAALALTHLDSVSEAFPV 584
A L+D+GIHPI+IADG+++A AL LDS+S+ FPV
Sbjct: 121 AEKLIDRGIHPIKIADGFDLACKKALETLDSISDKFPV 158
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 228 bits (557), Expect = 3e-60
Identities = 103/158 (65%), Positives = 134/158 (84%)
Frame = +3
Query: 111 MALFPGSVAFDEYGRPFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDK 290
MA + FDE G+PFI++R+Q+ QKR+TG +A+KSHI AAR +A+TLRTSLGPRGLDK
Sbjct: 1 MAQSSAQLLFDESGQPFIVMREQENQKRITGVEAVKSHILAARAVANTLRTSLGPRGLDK 60
Query: 291 LMVSSDGDVTVTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQ 470
++VS DGDVT+TNDGATI++ MDV+H + KL+V+L++SQD EIGDGTTGVVVLAGALLE+
Sbjct: 61 MLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEE 120
Query: 471 ASNLLDKGIHPIRIADGYEMAAALALTHLDSVSEAFPV 584
A L+D+GIHPI+IADG+++A AL LDS+S+ FPV
Sbjct: 121 AEKLIDRGIHPIKIADGFDLACKKALETLDSISDKFPV 158
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 140 bits (338), Expect = 9e-34
Identities = 68/117 (58%), Positives = 89/117 (76%)
Frame = +3
Query: 219 SHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQIGKLLVQLA 398
S+I AA+ +A +RTSLGPRG+DK++ S +GDVT+TNDGATIL M V H K+LV+L+
Sbjct: 35 SNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKMLVELS 94
Query: 399 QSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVS 569
++QD E GDGTT VVV+AGALL+ A NLL KGIHP I++ ++ AAA A LD +S
Sbjct: 95 KAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKILDEMS 151
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 140 bits (338), Expect = 9e-34
Identities = 68/117 (58%), Positives = 89/117 (76%)
Frame = +3
Query: 219 SHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQIGKLLVQLA 398
S+I AA+ +A +RTSLGPRG+DK++ S +GDVT+TNDGATIL M V H K+LV+L+
Sbjct: 35 SNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKMLVELS 94
Query: 399 QSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVS 569
++QD E GDGTT VVV+AGALL+ A NLL KGIHP I++ ++ AAA A LD +S
Sbjct: 95 KAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKILDEMS 151
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 131 bits (317), Expect = 3e-31
Identities = 62/123 (50%), Positives = 88/123 (71%)
Frame = +3
Query: 189 KRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEH 368
KR TG ++ AA IA+ +++SLGP GLDK++V GDV VTNDGATILK ++VEH
Sbjct: 14 KRTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEH 73
Query: 369 QIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALAL 548
GK+LV+LAQ QD+E+GDGTT VV++A LL++A L+ + +HP I +GY +A A+
Sbjct: 74 PAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAV 133
Query: 549 THL 557
++
Sbjct: 134 KYI 136
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 131 bits (317), Expect = 3e-31
Identities = 62/123 (50%), Positives = 88/123 (71%)
Frame = +3
Query: 189 KRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEH 368
KR TG ++ AA IA+ +++SLGP GLDK++V GDV VTNDGATILK ++VEH
Sbjct: 14 KRTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEH 73
Query: 369 QIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALAL 548
GK+LV+LAQ QD+E+GDGTT VV++A LL++A L+ + +HP I +GY +A A+
Sbjct: 74 PAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAV 133
Query: 549 THL 557
++
Sbjct: 134 KYI 136
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 118 bits (284), Expect = 3e-27
Identities = 56/116 (48%), Positives = 80/116 (68%)
Frame = +3
Query: 156 PFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDG 335
P I+L+D K+ G I S+I A + +A ++RT+LGPRGLDKL+V S G T++NDG
Sbjct: 5 PIILLKDGTENKQ--GKGQIISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDG 62
Query: 336 ATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHP 503
ATILK++D+ +V +A+SQD E+GDGTT VVVLA +L+Q ++ G+HP
Sbjct: 63 ATILKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHP 118
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 118 bits (284), Expect = 3e-27
Identities = 56/116 (48%), Positives = 80/116 (68%)
Frame = +3
Query: 156 PFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDG 335
P I+L+D K+ G I S+I A + +A ++RT+LGPRGLDKL+V S G T++NDG
Sbjct: 5 PIILLKDGTENKQ--GKGQIISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDG 62
Query: 336 ATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHP 503
ATILK++D+ +V +A+SQD E+GDGTT VVVLA +L+Q ++ G+HP
Sbjct: 63 ATILKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHP 118
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 108 bits (259), Expect = 3e-24
Identities = 59/142 (41%), Positives = 87/142 (61%), Gaps = 4/142 (2%)
Frame = +3
Query: 156 PFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVS----SDGDVTV 323
P IL+D +++R G A S A I ++++LGP+G+DK+++S S G + V
Sbjct: 3 PVQILKDNAQEER--GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 324 TNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHP 503
TNDGATILK + V++ K+LV ++ +QD E+GDGTT V VLA LL++A L+++ IHP
Sbjct: 61 TNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHP 120
Query: 504 IRIADGYEMAAALALTHLDSVS 569
I GY A +A L S
Sbjct: 121 QTIISGYRRALGIAQESLKKSS 142
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 108 bits (259), Expect = 3e-24
Identities = 59/142 (41%), Positives = 87/142 (61%), Gaps = 4/142 (2%)
Frame = +3
Query: 156 PFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVS----SDGDVTV 323
P IL+D +++R G A S A I ++++LGP+G+DK+++S S G + V
Sbjct: 3 PVQILKDNAQEER--GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 324 TNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHP 503
TNDGATILK + V++ K+LV ++ +QD E+GDGTT V VLA LL++A L+++ IHP
Sbjct: 61 TNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHP 120
Query: 504 IRIADGYEMAAALALTHLDSVS 569
I GY A +A L S
Sbjct: 121 QTIISGYRRALGIAQESLKKSS 142
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 108 bits (259), Expect = 3e-24
Identities = 59/142 (41%), Positives = 87/142 (61%), Gaps = 4/142 (2%)
Frame = +3
Query: 156 PFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVS----SDGDVTV 323
P IL+D +++R G A S A I ++++LGP+G+DK+++S S G + V
Sbjct: 3 PVQILKDNAQEER--GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 324 TNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHP 503
TNDGATILK + V++ K+LV ++ +QD E+GDGTT V VLA LL++A L+++ IHP
Sbjct: 61 TNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHP 120
Query: 504 IRIADGYEMAAALALTHLDSVS 569
I GY A +A L S
Sbjct: 121 QTIISGYRRALGIAQESLKKSS 142
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 107 bits (257), Expect = 6e-24
Identities = 50/123 (40%), Positives = 84/123 (68%), Gaps = 1/123 (0%)
Frame = +3
Query: 201 GTD-AIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQIG 377
GTD A++ +I+A ++AS +R++ GP G++K++++ + VTND ATILK ++++H
Sbjct: 23 GTDEAVQRNIEACTELASQIRSAYGPNGMNKMVINHIEKLFVTNDAATILKELEIQHPAA 82
Query: 378 KLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHL 557
++++ + Q+ +IGD T VV+LA ALLE A+NL+ G+ P +A GYE AA AL L
Sbjct: 83 RIIIMATEMQEKQIGDNTNTVVILAAALLEHAANLIHMGMTPQEVAAGYEQAAEKALEIL 142
Query: 558 DSV 566
++
Sbjct: 143 PTL 145
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 101 bits (242), Expect = 4e-22
Identities = 46/128 (35%), Positives = 79/128 (61%)
Frame = +3
Query: 210 AIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQIGKLLV 389
A++ +I AR + +R++LGP+G K++VS GD+ +T DG +L M ++H ++
Sbjct: 19 ALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHPTASMIA 78
Query: 390 QLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVS 569
+ + +QDD GDGTT V+L G LL+QA +L+ +G+HP + +G+E A L L+
Sbjct: 79 KASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWANTKTLELLEKFK 138
Query: 570 EAFPVNKN 593
+ PV ++
Sbjct: 139 KEAPVERD 146
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 101 bits (242), Expect = 4e-22
Identities = 46/128 (35%), Positives = 79/128 (61%)
Frame = +3
Query: 210 AIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQIGKLLV 389
A++ +I AR + +R++LGP+G K++VS GD+ +T DG +L M ++H ++
Sbjct: 19 ALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHPTASMIA 78
Query: 390 QLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVS 569
+ + +QDD GDGTT V+L G LL+QA +L+ +G+HP + +G+E A L L+
Sbjct: 79 KASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWANTKTLELLEKFK 138
Query: 570 EAFPVNKN 593
+ PV ++
Sbjct: 139 KEAPVERD 146
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 99 bits (238), Expect = 1e-21
Identities = 48/127 (37%), Positives = 76/127 (59%)
Frame = +3
Query: 153 RPFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTND 332
+P I+L KR +G +I A + IA +RTSLGPR + K+++ G + +TND
Sbjct: 7 QPIIVL--SQGTKRESGHQVQIGNINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTND 64
Query: 333 GATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHPIRI 512
G IL+ + V+H K ++++A++QD+E GDGTT V++LAG ++ A L++ HP I
Sbjct: 65 GNAILREITVKHPAAKSMIEIARTQDEETGDGTTSVIILAGEVMAHAQTYLEQKTHPTLI 124
Query: 513 ADGYEMA 533
Y A
Sbjct: 125 IKAYRQA 131
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 60.1 bits (139), Expect = 1e-09
Identities = 32/128 (25%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Frame = +3
Query: 201 GTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQI-- 374
G + ++ + +A + ++GP+G + ++ S G +T DG T+ K +D++ +
Sbjct: 24 GAEGRQAMLVGVNLLADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKYQN 83
Query: 375 --GKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALAL 548
KL+ +A ++E GDGTT VLA A+ ++ + +G + + I G A + +
Sbjct: 84 LGAKLIQDVANKANEEAGDGTTCATVLARAIAKEGFESIRQGGNAVEIRRGVMNAVEVVV 143
Query: 549 THLDSVSE 572
L +S+
Sbjct: 144 AELKKISK 151
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 53.6 bits (123), Expect = 1e-07
Identities = 30/128 (23%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Frame = +3
Query: 201 GTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQI-- 374
G + ++ + +A + ++GP+G + ++ S G +T DG T+ K +D++ +
Sbjct: 24 GAEGRQAMLVGVNLLADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKYQN 83
Query: 375 --GKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALAL 548
KL+ +A ++E GDGTT VL A+ ++ + + I G A + +
Sbjct: 84 LGAKLIQDVANKANEEAGDGTTCATVLTRAIAKEGFERHSSRGNAVEIRRGVMNAVEVVV 143
Query: 549 THLDSVSE 572
L +S+
Sbjct: 144 AELKKISK 151
>Z81062-1|CAB02945.2| 365|Caenorhabditis elegans Hypothetical
protein F15A4.1 protein.
Length = 365
Score = 29.1 bits (62), Expect = 2.5
Identities = 10/42 (23%), Positives = 20/42 (47%)
Frame = +1
Query: 361 LSIRLVNYLCNWLRVKMTKLVMVPQGLLFLLVHSLSKPQICW 486
++I +LC W KL+++P + + +KP + W
Sbjct: 63 MNIMTALFLCQWFEAIAAKLLIIPYQIGVIRFSDYNKPYVSW 104
>Z79752-6|CAB02080.2| 423|Caenorhabditis elegans Hypothetical
protein D2005.6 protein.
Length = 423
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = -3
Query: 531 PSHNHRLYESDGYLCPTDLRLAQGVHQQEQQPLWYHHQFRHLDSEP 394
P++ H Y +GY+ PT Q Q+Q P + + + H + +P
Sbjct: 53 PAYLHEPYGQNGYIDPTYGDTQQQHPSQQQYPYYGYPSYSHYNYQP 98
>Z81138-2|CAB03473.1| 2265|Caenorhabditis elegans Hypothetical protein
W05B2.4 protein.
Length = 2265
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -3
Query: 522 NHRLYESDGYLCPTDLRLAQGVHQQEQQPLWYH 424
+H+ Y DG LC +D ++ + E+ W H
Sbjct: 1747 DHKTYWKDGKLCNSDAQIRMIIITDEEDYAWLH 1779
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 27.5 bits (58), Expect = 7.6
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -1
Query: 326 CYCH--ITIRRHHKLIKTAGTKRCAKSACNLSGCLYM*LYGIGTGKSFLSILI 174
CY TI R + KR A++ L G + +G GTG FLS+L+
Sbjct: 108 CYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLM 160
>Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical protein
K03H1.5 protein.
Length = 1385
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 462 GVHQQEQQPLWYHHQFRHLDSEPIAQVVYQSD 367
G + +P W H QF+HLD Q + QS+
Sbjct: 947 GTRRFFDKPHWKHQQFKHLDIRNPLQNMNQSE 978
>U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical
protein T04G9.1 protein.
Length = 1610
Score = 27.5 bits (58), Expect = 7.6
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -2
Query: 97 NSAQTKDENRFNISVLRKYKTKLKFYNH 14
NS TK+ N + ++RKY+ K +N+
Sbjct: 863 NSISTKERNLLTLKLMRKYQLKFAKFNN 890
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 27.5 bits (58), Expect = 7.6
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -1
Query: 326 CYCH--ITIRRHHKLIKTAGTKRCAKSACNLSGCLYM*LYGIGTGKSFLSILI 174
CY TI R + KR A++ L G + +G GTG FLS+L+
Sbjct: 80 CYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLM 132
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,956,065
Number of Sequences: 27780
Number of extensions: 300787
Number of successful extensions: 901
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 897
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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