Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc25d13
         (623 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative odorant-b...    24   3.4  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   6.0  
AJ618920-1|CAF01999.1|  204|Anopheles gambiae putative odorant-b...    23   7.9  

>AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative
           odorant-binding protein OBPjj17 protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = -2

Query: 577 MYVHFIHNSTAHIVHH*KNKLWMLL 503
           M +HF+  ST H ++   + +W+++
Sbjct: 1   MSLHFVRTSTTHGINMRSSSVWLIV 25


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = +3

Query: 165 TRWCQWHCCTSLRTAINDTMQHSSYTTKLS*CIGSI 272
           + WC +H C      +N+ +Q   Y  +   C G++
Sbjct: 643 SEWCSFHGCMGAVCNLNELIQGRRYFFRA--CAGNV 676


>AJ618920-1|CAF01999.1|  204|Anopheles gambiae putative
           odorant-binding protein OBPjj4 protein.
          Length = 204

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 7/30 (23%), Positives = 18/30 (60%)
 Frame = -2

Query: 271 MLPMHQESLVV*LECCMVSLIAVRSEVQQC 182
           +L  H  + +   ECC + ++A ++ +++C
Sbjct: 28  VLGCHNGTSITVDECCAIPMLANKTVIEKC 57


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 667,787
Number of Sequences: 2352
Number of extensions: 14837
Number of successful extensions: 28
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)