Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc25d10
         (698 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92784-4|CAB07195.1|  180|Caenorhabditis elegans Hypothetical pr...   120   1e-27
Z83125-8|CAB05623.1|  507|Caenorhabditis elegans Hypothetical pr...    30   1.4  
CU457741-8|CAM36349.1|  544|Caenorhabditis elegans Hypothetical ...    29   3.2  
AL132948-7|CAD31810.1|  426|Caenorhabditis elegans Hypothetical ...    28   5.6  

>Z92784-4|CAB07195.1|  180|Caenorhabditis elegans Hypothetical
           protein F31C3.5 protein.
          Length = 180

 Score =  120 bits (289), Expect = 1e-27
 Identities = 57/164 (34%), Positives = 101/164 (61%), Gaps = 2/164 (1%)
 Frame = +2

Query: 143 MEPYEIEFIGENRIISITPNFTHDK-IYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCH 319
           M     EFI  N +I + P+ + D+ I+LI G+ GPF AG+P  +P+W AI++K+K  C 
Sbjct: 1   MNAERCEFIAGNSLIEVIPSISDDRPIHLISGDIGPFEAGVPCRIPVWTAILMKRKHNCK 60

Query: 320 VIPPDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKD 499
           V+ P WMDV+ L+ I   E  S+   K+P +H+   + +++  A ED+     +K++++D
Sbjct: 61  VVAPQWMDVDELKKILTSETESQGLAKLP-DHFFEISHMLVRDAREDIFEVEAVKSLVQD 119

Query: 500 IWDIRMSKLRTS-MDALMKTGGGYGRLDHLTMMEINSVKPLLPA 628
           I+D R +KLR+S ++ L +    + +LD++ ++E +S +  L A
Sbjct: 120 IYDRRDAKLRSSAIEFLRQNQTCHAQLDNVQLIEASSARATLEA 163


>Z83125-8|CAB05623.1|  507|Caenorhabditis elegans Hypothetical
           protein T15D6.10 protein.
          Length = 507

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 18/72 (25%), Positives = 30/72 (41%)
 Frame = -2

Query: 358 LQNFHVHPVRRDNMALLFLL*HDSQPEWYVHR*TSTKRTKFTAYQVYFIMGKVWCYTDYP 179
           L  FH   +   +  + +++ H++ PE Y +    T    F  YQ    +GKVW      
Sbjct: 328 LDTFHTASIANLHFRVKWVMKHNNTPERYENDKQLTSEMLFHKYQNLSRIGKVWQQPKCI 387

Query: 178 ILTNKLDFIRFH 143
           I    + F+  H
Sbjct: 388 IRPENVAFMTIH 399


>CU457741-8|CAM36349.1|  544|Caenorhabditis elegans Hypothetical
           protein C42C1.8 protein.
          Length = 544

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -3

Query: 510 ISQMSLIIVFISGALGTSSAAEPSISLASTI*CSF 406
           +  MSLI+ FISGA G    A   + L   I C++
Sbjct: 384 VPNMSLILFFISGAFGFCGLAAYPVGLELAIECTY 418


>AL132948-7|CAD31810.1|  426|Caenorhabditis elegans Hypothetical
           protein Y39B6A.8 protein.
          Length = 426

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 17/66 (25%), Positives = 32/66 (48%)
 Frame = +2

Query: 422 VEAKLILGSAAEDVPNAPEIKTIIKDIWDIRMSKLRTSMDALMKTGGGYGRLDHLTMMEI 601
           ++  L+L S  ED    P + + I +I +  + +   S+++L K+G    +L+       
Sbjct: 288 IDENLLLTSTMEDGATVPTVTSNILEILEDALEEGSGSLESLEKSGNSGEKLEENRKNRR 347

Query: 602 NSVKPL 619
            SVK L
Sbjct: 348 KSVKSL 353


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,398,350
Number of Sequences: 27780
Number of extensions: 361362
Number of successful extensions: 905
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 904
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)