Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc25d09
         (591 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   2.6  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   3.4  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   4.5  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   5.9  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   5.9  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   7.8  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -2

Query: 167 NCCTYRDVHIDYPLKNCYRTLY*LVKSHL 81
           NCC+ +   +++ + N Y  L  L  ++L
Sbjct: 106 NCCSKKSFRMNFAIFNLYMVLLLLFDAYL 134


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 134 NQYEHPDMYNNCHSYYMK 187
           N Y H D+ NN  SY ++
Sbjct: 329 NNYFHMDLENNVQSYSLQ 346


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 519 KTFFSNGCCLNVSV 478
           K ++ N CCLN+S+
Sbjct: 54  KYYWLNVCCLNLSI 67


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +2

Query: 362 IFNCNCLLMFFRCT 403
           + NC C L F  CT
Sbjct: 217 MLNCLCSLWFINCT 230


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +2

Query: 362 IFNCNCLLMFFRCT 403
           + NC C L F  CT
Sbjct: 217 MLNCLCSLWFINCT 230


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 577 VTRGATSSSLHNSFRITN 524
           +TR +TSSS H S + T+
Sbjct: 383 ITRKSTSSSTHTSSQQTS 400


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,599
Number of Sequences: 336
Number of extensions: 2813
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)