Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc25d09
         (591 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    27   0.45 
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    25   2.4  

>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 27.1 bits (57), Expect = 0.45
 Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
 Frame = +2

Query: 296 NEFTFRV*ILIL*YKSVRNTVIIFNCNCLLMFFRCT*VSK*CHLHRVRVFLKPIYNIIYT 475
           N F  RV IL+     +   V++F   C +MFF+    S       ++    P   I++ 
Sbjct: 546 NHFNRRVNILLEFIPQMMFLVLLFAYMCFMMFFKWIMYSAVTDEDHLKPGCAPSVLIMFI 605

Query: 476 DTLTFK-QQPL 505
           + + FK Q+PL
Sbjct: 606 NMMLFKNQEPL 616


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +2

Query: 257 ISPCLPIIFVPYCNEFTFRV*ILIL*YKSVRNTVIIFNCNCLL 385
           ++PC+ I+ + Y       +  LI  +++VRNT       CLL
Sbjct: 58  MTPCMVIVMLSYIFGCVGNLMALIHLWRNVRNTKHALMLKCLL 100


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 548,460
Number of Sequences: 2352
Number of extensions: 9376
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)