SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc25d09
         (591 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    22   5.2  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    22   5.2  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    22   5.2  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    22   5.2  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    22   5.2  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    22   5.2  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    22   5.2  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    22   5.2  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              21   6.8  
DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    21   6.8  
DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex det...    21   6.8  
DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex det...    21   6.8  
DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex det...    21   6.8  
DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex det...    21   6.8  
DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex det...    21   6.8  
DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex det...    21   6.8  
DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex det...    21   6.8  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    21   9.0  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    21   9.0  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    21   9.0  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    21   9.0  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    21   9.0  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    21   9.0  
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    21   9.0  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    21   9.0  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    21   9.0  

>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -3

Query: 556 SSLHNSFRITNYENIF*QWLLFKCQRISIYNII 458
           SSL N+++ +NY N    +     +++  YNII
Sbjct: 83  SSLSNNYKYSNYNNYNNNYNT-NYKKLQYYNII 114


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -3

Query: 556 SSLHNSFRITNYENIF*QWLLFKCQRISIYNII 458
           SSL N+++ +NY N    +     +++  YNII
Sbjct: 83  SSLSNNYKYSNYNNYNNNYNT-NYKKLQYYNII 114


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -3

Query: 556 SSLHNSFRITNYENIF*QWLLFKCQRISIYNII 458
           SSL N+++ +NY N    +     +++  YNII
Sbjct: 83  SSLSNNYKYSNYNNYNNNYNT-NYKKLQYYNII 114


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -3

Query: 556 SSLHNSFRITNYENIF*QWLLFKCQRISIYNII 458
           SSL N+++ +NY N    +     +++  YNII
Sbjct: 83  SSLSNNYKYSNYNNYNNNYNT-NYKKLQYYNII 114


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -3

Query: 556 SSLHNSFRITNYENIF*QWLLFKCQRISIYNII 458
           SSL N+++ +NY N    +     +++  YNII
Sbjct: 83  SSLSNNYKYSNYNNYNNNYNT-NYKKLQYYNII 114


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -3

Query: 556 SSLHNSFRITNYENIF*QWLLFKCQRISIYNII 458
           SSL N+++ +NY N    +     +++  YNII
Sbjct: 83  SSLSNNYKYSNYNNYNNNYNT-NYKKLQYYNII 114


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 107 VFCSNFSKGNQYEHPDMYNNCHSYY 181
           +  +N S  N Y + + YNN ++ Y
Sbjct: 81  IISNNNSLSNNYNYNNNYNNYNNNY 105


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -3

Query: 556 SSLHNSFRITNYENIF*QWLLFKCQRISIYNII 458
           SSL N+++ +NY N    +     +++  YNII
Sbjct: 83  SSLSNNYKYSNYNNYNNNYNT-NYKKLQYYNII 114


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +2

Query: 113 CSNFSKGNQYEHPDMYNNCHS 175
           C   +KG+  E+   +N C++
Sbjct: 115 CKGIAKGDNCEYAYRFNKCYA 135


>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 119 NFSKGNQYEHPDMYNNCHSYY 181
           N+S  N Y + + YNN    Y
Sbjct: 90  NYSNYNNYNNNNNYNNYKKLY 110


>DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 119 NFSKGNQYEHPDMYNNCHSYY 181
           N+S  N Y + + YNN    Y
Sbjct: 90  NYSNYNNYNNNNNYNNYKKLY 110


>DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 119 NFSKGNQYEHPDMYNNCHSYY 181
           N+S  N Y + + YNN    Y
Sbjct: 90  NYSNYNNYNNNNNYNNYKKLY 110


>DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 119 NFSKGNQYEHPDMYNNCHSYY 181
           N+S  N Y + + YNN    Y
Sbjct: 90  NYSNYNNYNNNNNYNNYKKLY 110


>DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 119 NFSKGNQYEHPDMYNNCHSYY 181
           N+S  N Y + + YNN    Y
Sbjct: 90  NYSNYNNYNNNNNYNNYKKLY 110


>DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 119 NFSKGNQYEHPDMYNNCHSYY 181
           N+S  N Y + + YNN    Y
Sbjct: 90  NYSNYNNYNNNNNYNNYKKLY 110


>DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 119 NFSKGNQYEHPDMYNNCHSYY 181
           N+S  N Y + + YNN    Y
Sbjct: 90  NYSNYNNYNNNNNYNNYKKLY 110


>DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 119 NFSKGNQYEHPDMYNNCHSYY 181
           N+S  N Y + + YNN    Y
Sbjct: 90  NYSNYNNYNNNNNYNNYKKLY 110


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 556 SSLHNSFRITNYEN 515
           SSL N+++ +NY N
Sbjct: 83  SSLSNNYKYSNYNN 96


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 556 SSLHNSFRITNYEN 515
           SSL N+++ +NY N
Sbjct: 83  SSLSNNYKYSNYNN 96


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 556 SSLHNSFRITNYEN 515
           SSL N+++ +NY N
Sbjct: 83  SSLSNNYKYSNYNN 96


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 556 SSLHNSFRITNYEN 515
           SSL N+++ +NY N
Sbjct: 83  SSLSNNYKYSNYNN 96


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 556 SSLHNSFRITNYEN 515
           SSL N+++ +NY N
Sbjct: 83  SSLSNNYKYSNYNN 96


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 556 SSLHNSFRITNYEN 515
           SSL N+++ +NY N
Sbjct: 83  SSLSNNYKYSNYNN 96


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 556 SSLHNSFRITNYEN 515
           SSL N+++ +NY N
Sbjct: 83  SSLSNNYKYSNYNN 96


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 556 SSLHNSFRITNYEN 515
           SSL N+++ +NY N
Sbjct: 316 SSLSNNYKYSNYNN 329


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 556 SSLHNSFRITNYEN 515
           SSL N+++ +NY N
Sbjct: 316 SSLSNNYKYSNYNN 329


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,748
Number of Sequences: 438
Number of extensions: 3271
Number of successful extensions: 27
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -