Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc25d03
         (685 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3059|ABI31192.1|  105|Drosophila melanogaster CG34148-P...    77   3e-14

>AE014297-3059|ABI31192.1|  105|Drosophila melanogaster CG34148-PA
           protein.
          Length = 105

 Score = 76.6 bits (180), Expect = 3e-14
 Identities = 31/55 (56%), Positives = 43/55 (78%), Gaps = 1/55 (1%)
 Frame = +3

Query: 408 VKDDQFGMSNFNWKVGN-SNYQILRTGCFPYIKYHCSRKKAEDLNMSDKFMRIIK 569
           V +DQ GMS+FNW + N +NY ILRT C+PY+KYHCS+++ +DL + DKF R +K
Sbjct: 38  VANDQRGMSHFNWTLENGTNYHILRTACYPYMKYHCSKREVQDLWLEDKFFRFLK 92



 Score = 54.8 bits (126), Expect = 1e-07
 Identities = 23/32 (71%), Positives = 26/32 (81%)
 Frame = +2

Query: 308 IARFSNKPTSSEVLTAYLTQCNEPPWTSYFVK 403
           + R   KP +SEVLTAYL QC+EPPWTSYFVK
Sbjct: 3   LTRLLLKPRASEVLTAYLKQCHEPPWTSYFVK 34


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,232,150
Number of Sequences: 53049
Number of extensions: 579519
Number of successful extensions: 815
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)