Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc25c24
         (607 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0459 + 18092656-18092724,18092827-18092886,18092970-180930...    29   2.9  

>10_08_0459 +
           18092656-18092724,18092827-18092886,18092970-18093038,
           18093134-18093178,18093706-18094332,18094424-18094597,
           18094688-18094991,18095070-18095161,18095253-18095319,
           18095407-18095478,18095613-18095830,18095979-18096113,
           18096225-18096520,18096603-18096774,18096860-18096958,
           18097048-18097179,18097273-18097373,18097460-18097649,
           18097713-18097751
          Length = 986

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 26/92 (28%), Positives = 45/92 (48%)
 Frame = +2

Query: 188 FFNDKIMFVLQIPLVEPQEFNVYLCIPLPVPHNATNINSFSTVIPNEKYLVISKDKTRYS 367
           FF D+  F+ + PL   +    +L + L     A  +   S+++P+ KYL I +D    +
Sbjct: 205 FFGDQ--FIKKEPLTNEKVITSFLIVAL-----ACFLCPNSSILPSTKYLTIFQD---VN 254

Query: 368 NLRSLSQCKSINYVYYICNIVKILSTNANPSC 463
           NLR+    K I Y + +  + K + TN+   C
Sbjct: 255 NLRNYDWSKFI-YDWSMNYMKKFVKTNSLGGC 285


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,015,064
Number of Sequences: 37544
Number of extensions: 284675
Number of successful extensions: 582
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 582
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1442939384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)