Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc25c24
         (607 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF238489-1|AAL32998.1|  308|Homo sapiens olfactory-like receptor...    31   4.2  
AF038661-1|AAC39734.1|  393|Homo sapiens beta-1,4-galactosyltran...    31   4.2  
AF162669-1|AAG43387.1|  311|Homo sapiens olfactory receptor-like...    30   5.5  
AF162668-1|AAG43386.1|  311|Homo sapiens olfactory receptor-like...    30   5.5  
AB065828-1|BAC06047.1|  308|Homo sapiens seven transmembrane hel...    30   7.3  

>AF238489-1|AAL32998.1|  308|Homo sapiens olfactory-like receptor
           JCG9 protein.
          Length = 308

 Score = 30.7 bits (66), Expect = 4.2
 Identities = 29/124 (23%), Positives = 60/124 (48%), Gaps = 2/124 (1%)
 Frame = +2

Query: 152 HTLMKISNVISYFFNDKIMFVLQIPLVEPQEFNVYLCIPLPVPHNATNINSF--STVIPN 325
           +T++    ++  FF   +  V +  L+    ++ Y+ I  P+ +NA  ++S+  S ++  
Sbjct: 90  NTILYSECMVQLFFF-VVFVVAEGYLLTAMAYDRYVAICSPLLYNAI-MSSWVCSLLVLA 147

Query: 326 EKYLVISKDKTRYSNLRSLSQCKSINYVYYICNIVKILSTNANPSCESELVSKAITTLPT 505
             +L      T  S +  LS CKS    +Y C+++ +L+ + + +  +EL+   I    T
Sbjct: 148 AFFLGFLSALTHTSAMMKLSFCKSHIINHYFCDVLPLLNLSCSNTHLNELLLFIIAGFNT 207

Query: 506 LCKT 517
           L  T
Sbjct: 208 LVPT 211


>AF038661-1|AAC39734.1|  393|Homo sapiens
           beta-1,4-galactosyltransferase protein.
          Length = 393

 Score = 30.7 bits (66), Expect = 4.2
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +2

Query: 206 MFVLQIPLVEPQEFNVYLCIPLPVPHNATNINSFSTVIPNEKY 334
           +F+  + L+   + N+Y+C P    H A  +NSF   +P  +Y
Sbjct: 191 LFLHDVDLLPENDHNLYVCDPRGPRHVAVAMNSFGYSLPYPQY 233


>AF162669-1|AAG43387.1|  311|Homo sapiens olfactory receptor-like
           protein JCG2 protein.
          Length = 311

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 26/112 (23%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
 Frame = +2

Query: 185 YFFNDKIMFVLQIPLVEPQEFNVYLCIPLPVPHNATNINSFSTVIPNEKYLVISKDKTRY 364
           YFF   I  + +  L+   E++ Y+ I  P+ +N    +   +++    Y +     T +
Sbjct: 102 YFF--LIFVIAEGYLLTAMEYDRYVAICRPLLYNIVMSHRVCSIMMAVVYSLGFLWATVH 159

Query: 365 SNLRS-LSQCKSINYVYYICNIVKILSTNANPSCESELVSKAITTLPTLCKT 517
           +   S LS C+S    +Y C+I+ +L+ + + +  +E++   I  + TL  T
Sbjct: 160 TTRMSVLSFCRSHTVSHYFCDILPLLTLSCSSTHINEILLFIIGGVNTLATT 211


>AF162668-1|AAG43386.1|  311|Homo sapiens olfactory receptor-like
           protein JCG2 protein.
          Length = 311

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 26/112 (23%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
 Frame = +2

Query: 185 YFFNDKIMFVLQIPLVEPQEFNVYLCIPLPVPHNATNINSFSTVIPNEKYLVISKDKTRY 364
           YFF   I  + +  L+   E++ Y+ I  P+ +N    +   +++    Y +     T +
Sbjct: 102 YFF--LIFVIAEGYLLTAMEYDRYVAICRPLLYNIVMSHRVCSIMMAVVYSLGFLWATVH 159

Query: 365 SNLRS-LSQCKSINYVYYICNIVKILSTNANPSCESELVSKAITTLPTLCKT 517
           +   S LS C+S    +Y C+I+ +L+ + + +  +E++   I  + TL  T
Sbjct: 160 TTRMSVLSFCRSHTVSHYFCDILPLLTLSCSSTHINEILLFIIGGVNTLATT 211


>AB065828-1|BAC06047.1|  308|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 308

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
 Frame = +2

Query: 227 LVEPQEFNVYLCIPLPVPHNATNINSF--STVIPNEKYLVISKDKTRYSNLRSLSQCKSI 400
           L+    ++ Y+ I  P+ +NA  ++S+  S ++    +L      T  S +  LS CKS 
Sbjct: 114 LLTAMAYDRYVAICSPLLYNAI-MSSWVCSLLVLAAFFLGFLSALTHTSAMMKLSFCKSH 172

Query: 401 NYVYYICNIVKILSTNANPSCESELVSKAITTLPTLCKT 517
              +Y C+++ +L+ + + +  +EL+   I    TL  T
Sbjct: 173 IINHYFCDVLPLLNLSCSNTHLNELLLFIIAGFNTLVPT 211


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,095,602
Number of Sequences: 237096
Number of extensions: 1819896
Number of successful extensions: 4833
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4832
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)