Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc25c24
(607 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ177379-1|ABA60840.1| 531|Drosophila melanogaster Iris protein. 44 1e-04
DQ177375-1|ABA60836.1| 528|Drosophila melanogaster Iris protein. 44 1e-04
DQ177374-1|ABA60835.1| 528|Drosophila melanogaster Iris protein. 44 1e-04
DQ177371-1|ABA60832.1| 531|Drosophila melanogaster Iris protein. 44 1e-04
DQ177366-1|ABA60827.1| 531|Drosophila melanogaster Iris protein. 44 1e-04
AY069209-1|AAL39354.1| 531|Drosophila melanogaster GH26159p pro... 44 1e-04
AE014134-205|AAF51415.1| 531|Drosophila melanogaster CG4715-PA ... 44 1e-04
DQ177377-1|ABA60838.1| 528|Drosophila melanogaster Iris protein. 43 3e-04
DQ177376-1|ABA60837.1| 528|Drosophila melanogaster Iris protein. 43 3e-04
DQ177373-1|ABA60834.1| 528|Drosophila melanogaster Iris protein. 43 3e-04
DQ177372-1|ABA60833.1| 528|Drosophila melanogaster Iris protein. 43 3e-04
DQ177370-1|ABA60831.1| 528|Drosophila melanogaster Iris protein. 43 3e-04
DQ177369-1|ABA60830.1| 528|Drosophila melanogaster Iris protein. 43 3e-04
DQ177368-1|ABA60829.1| 531|Drosophila melanogaster Iris protein. 43 3e-04
DQ177367-1|ABA60828.1| 528|Drosophila melanogaster Iris protein. 42 7e-04
AY061571-1|AAL29119.1| 539|Drosophila melanogaster SD01935p pro... 42 7e-04
DQ177378-1|ABA60839.1| 528|Drosophila melanogaster Iris protein. 41 0.001
AY180917-1|AAN87269.1| 2360|Drosophila melanogaster ORF protein. 40 0.003
AJ000387-1|CAA04048.1| 551|Drosophila melanogaster Envelope pro... 38 0.008
AY928610-3|AAX28845.1| 487|Drosophila melanogaster envelope pro... 36 0.057
AY061584-1|AAL29132.1| 487|Drosophila melanogaster SD03311p pro... 36 0.057
AJ001516-1|CAC79666.1| 550|Drosophila melanogaster env protein ... 36 0.057
>DQ177379-1|ABA60840.1| 531|Drosophila melanogaster Iris protein.
Length = 531
Score = 44.4 bits (100), Expect = 1e-04
Identities = 28/111 (25%), Positives = 52/111 (46%)
Frame = +2
Query: 149 IHTLMKISNVISYFFNDKIMFVLQIPLVEPQEFNVYLCIPLPVPHNATNINSFSTVIPNE 328
I + +++V+ + + F + +PL++ ++FN+Y P+P +N I T P
Sbjct: 228 IRNIYLLASVVPRQRGNHVEFQITVPLLDAEKFNIYRLTPIPRLNNGV-IQLVDTETP-- 284
Query: 329 KYLVISKDKTRYSNLRSLSQCKSINYVYYICNIVKILSTNANPSCESELVS 481
YL I+ RY L+SL C + +IC +I+ + S L +
Sbjct: 285 -YLGINDHMDRYFPLQSLDDCIKLGEERFICRRNRIIYGTGDDSFACSLAA 334
>DQ177375-1|ABA60836.1| 528|Drosophila melanogaster Iris protein.
Length = 528
Score = 44.4 bits (100), Expect = 1e-04
Identities = 28/111 (25%), Positives = 52/111 (46%)
Frame = +2
Query: 149 IHTLMKISNVISYFFNDKIMFVLQIPLVEPQEFNVYLCIPLPVPHNATNINSFSTVIPNE 328
I + +++V+ + + F + +PL++ ++FN+Y P+P +N I T P
Sbjct: 228 IRNIYLLASVVPRQRGNHVEFQITVPLLDAEKFNIYRLTPIPRLNNG-EIQLVDTETP-- 284
Query: 329 KYLVISKDKTRYSNLRSLSQCKSINYVYYICNIVKILSTNANPSCESELVS 481
YL I+ RY L+SL C + +IC +I+ + S L +
Sbjct: 285 -YLGINDHMDRYFPLQSLDDCIKLGEERFICRRNRIIYGTGDDSFACSLAA 334
>DQ177374-1|ABA60835.1| 528|Drosophila melanogaster Iris protein.
Length = 528
Score = 44.4 bits (100), Expect = 1e-04
Identities = 28/111 (25%), Positives = 52/111 (46%)
Frame = +2
Query: 149 IHTLMKISNVISYFFNDKIMFVLQIPLVEPQEFNVYLCIPLPVPHNATNINSFSTVIPNE 328
I + +++V+ + + F + +PL++ ++FN+Y P+P +N I T P
Sbjct: 228 IRNIYLLASVVPRQRGNHVEFQITVPLLDAEKFNIYRLTPIPRLNNG-EIQLVDTETP-- 284
Query: 329 KYLVISKDKTRYSNLRSLSQCKSINYVYYICNIVKILSTNANPSCESELVS 481
YL I+ RY L+SL C + +IC +I+ + S L +
Sbjct: 285 -YLGINDHMDRYFPLQSLDDCIKLGEERFICRRNRIIYGTGDDSFACSLAA 334
>DQ177371-1|ABA60832.1| 531|Drosophila melanogaster Iris protein.
Length = 531
Score = 44.4 bits (100), Expect = 1e-04
Identities = 28/111 (25%), Positives = 52/111 (46%)
Frame = +2
Query: 149 IHTLMKISNVISYFFNDKIMFVLQIPLVEPQEFNVYLCIPLPVPHNATNINSFSTVIPNE 328
I + +++V+ + + F + +PL++ ++FN+Y P+P +N I T P
Sbjct: 228 IRNIYLLASVVPRQRGNHVEFQITVPLLDAEKFNIYRLTPIPRLNNG-EIQLVDTETP-- 284
Query: 329 KYLVISKDKTRYSNLRSLSQCKSINYVYYICNIVKILSTNANPSCESELVS 481
YL I+ RY L+SL C + +IC +I+ + S L +
Sbjct: 285 -YLGINDHMDRYFPLQSLDDCIKLGEERFICRRNRIIYGTGDDSFACSLAA 334
>DQ177366-1|ABA60827.1| 531|Drosophila melanogaster Iris protein.
Length = 531
Score = 44.4 bits (100), Expect = 1e-04
Identities = 28/111 (25%), Positives = 52/111 (46%)
Frame = +2
Query: 149 IHTLMKISNVISYFFNDKIMFVLQIPLVEPQEFNVYLCIPLPVPHNATNINSFSTVIPNE 328
I + +++V+ + + F + +PL++ ++FN+Y P+P +N I T P
Sbjct: 228 IRNIYLLASVVPRQRGNHVEFQITVPLLDAEKFNIYRLTPIPRLNNGV-IQLVDTETP-- 284
Query: 329 KYLVISKDKTRYSNLRSLSQCKSINYVYYICNIVKILSTNANPSCESELVS 481
YL I+ RY L+SL C + +IC +I+ + S L +
Sbjct: 285 -YLGINDHMDRYFPLQSLDDCIKLGEERFICRRNRIIYGTGDDSFACSLAA 334
>AY069209-1|AAL39354.1| 531|Drosophila melanogaster GH26159p
protein.
Length = 531
Score = 44.4 bits (100), Expect = 1e-04
Identities = 28/111 (25%), Positives = 52/111 (46%)
Frame = +2
Query: 149 IHTLMKISNVISYFFNDKIMFVLQIPLVEPQEFNVYLCIPLPVPHNATNINSFSTVIPNE 328
I + +++V+ + + F + +PL++ ++FN+Y P+P +N I T P
Sbjct: 228 IRNIYLLASVVPRQRGNHVEFQITVPLLDAEKFNIYRLTPIPRLNNGV-IQLVDTETP-- 284
Query: 329 KYLVISKDKTRYSNLRSLSQCKSINYVYYICNIVKILSTNANPSCESELVS 481
YL I+ RY L+SL C + +IC +I+ + S L +
Sbjct: 285 -YLGINDHMDRYFPLQSLDDCIKLGEERFICRRNRIIYGTGDDSFACSLAA 334
>AE014134-205|AAF51415.1| 531|Drosophila melanogaster CG4715-PA
protein.
Length = 531
Score = 44.4 bits (100), Expect = 1e-04
Identities = 28/111 (25%), Positives = 52/111 (46%)
Frame = +2
Query: 149 IHTLMKISNVISYFFNDKIMFVLQIPLVEPQEFNVYLCIPLPVPHNATNINSFSTVIPNE 328
I + +++V+ + + F + +PL++ ++FN+Y P+P +N I T P
Sbjct: 228 IRNIYLLASVVPRQRGNHVEFQITVPLLDAEKFNIYRLTPIPRLNNGV-IQLVDTETP-- 284
Query: 329 KYLVISKDKTRYSNLRSLSQCKSINYVYYICNIVKILSTNANPSCESELVS 481
YL I+ RY L+SL C + +IC +I+ + S L +
Sbjct: 285 -YLGINDHMDRYFPLQSLDDCIKLGEERFICRRNRIIYGTGDDSFACSLAA 334
>DQ177377-1|ABA60838.1| 528|Drosophila melanogaster Iris protein.
Length = 528
Score = 43.2 bits (97), Expect = 3e-04
Identities = 25/91 (27%), Positives = 45/91 (49%)
Frame = +2
Query: 149 IHTLMKISNVISYFFNDKIMFVLQIPLVEPQEFNVYLCIPLPVPHNATNINSFSTVIPNE 328
I + +++V+ + + F + +PL++ ++FN+Y P+P +N I T P
Sbjct: 228 IRNIYLLASVVPRQRGNHVEFQITVPLLDAEKFNIYRLTPIPRLNNG-EIQLVDTETP-- 284
Query: 329 KYLVISKDKTRYSNLRSLSQCKSINYVYYIC 421
YL I+ RY L+SL C + +IC
Sbjct: 285 -YLGINDHMDRYFPLQSLDDCIKLGEERFIC 314
>DQ177376-1|ABA60837.1| 528|Drosophila melanogaster Iris protein.
Length = 528
Score = 43.2 bits (97), Expect = 3e-04
Identities = 25/91 (27%), Positives = 45/91 (49%)
Frame = +2
Query: 149 IHTLMKISNVISYFFNDKIMFVLQIPLVEPQEFNVYLCIPLPVPHNATNINSFSTVIPNE 328
I + +++V+ + + F + +PL++ ++FN+Y P+P +N I T P
Sbjct: 228 IRNIYLLASVVPRQRGNHVEFQITVPLLDAEKFNIYRLTPIPRLNNG-EIQLVDTETP-- 284
Query: 329 KYLVISKDKTRYSNLRSLSQCKSINYVYYIC 421
YL I+ RY L+SL C + +IC
Sbjct: 285 -YLGINDHMDRYFPLQSLDDCIKLGEERFIC 314
>DQ177373-1|ABA60834.1| 528|Drosophila melanogaster Iris protein.
Length = 528
Score = 43.2 bits (97), Expect = 3e-04
Identities = 27/105 (25%), Positives = 50/105 (47%)
Frame = +2
Query: 167 ISNVISYFFNDKIMFVLQIPLVEPQEFNVYLCIPLPVPHNATNINSFSTVIPNEKYLVIS 346
+++V+ + + F + +PL++ ++FN+Y P+P +N I T P YL I+
Sbjct: 234 LASVVPRQRGNHVEFQITVPLLDAEKFNIYRLTPIPRLNNG-EIQLVDTETP---YLGIN 289
Query: 347 KDKTRYSNLRSLSQCKSINYVYYICNIVKILSTNANPSCESELVS 481
RY L+SL C + +IC +I+ + S L +
Sbjct: 290 DHMDRYFPLQSLDDCIKLGEERFICRRNRIIYGTGDDSFACSLAA 334
>DQ177372-1|ABA60833.1| 528|Drosophila melanogaster Iris protein.
Length = 528
Score = 43.2 bits (97), Expect = 3e-04
Identities = 27/105 (25%), Positives = 50/105 (47%)
Frame = +2
Query: 167 ISNVISYFFNDKIMFVLQIPLVEPQEFNVYLCIPLPVPHNATNINSFSTVIPNEKYLVIS 346
+++V+ + + F + +PL++ ++FN+Y P+P +N I T P YL I+
Sbjct: 234 LASVVPRQRGNHVEFQITVPLLDAEKFNIYRLTPIPRLNNG-EIQLVDTETP---YLGIN 289
Query: 347 KDKTRYSNLRSLSQCKSINYVYYICNIVKILSTNANPSCESELVS 481
RY L+SL C + +IC +I+ + S L +
Sbjct: 290 DHMDRYFPLQSLDDCIKLGEERFICRRNRIIYGTGDDSFACSLAA 334
>DQ177370-1|ABA60831.1| 528|Drosophila melanogaster Iris protein.
Length = 528
Score = 43.2 bits (97), Expect = 3e-04
Identities = 27/105 (25%), Positives = 50/105 (47%)
Frame = +2
Query: 167 ISNVISYFFNDKIMFVLQIPLVEPQEFNVYLCIPLPVPHNATNINSFSTVIPNEKYLVIS 346
+++V+ + + F + +PL++ ++FN+Y P+P +N I T P YL I+
Sbjct: 234 LASVVPRQRGNHVEFQITVPLLDAEKFNIYRLTPIPRLNNG-EIQLVDTETP---YLGIN 289
Query: 347 KDKTRYSNLRSLSQCKSINYVYYICNIVKILSTNANPSCESELVS 481
RY L+SL C + +IC +I+ + S L +
Sbjct: 290 DHMDRYFPLQSLDDCIKLGEERFICRRNRIIYGTGDDSFACSLAA 334
>DQ177369-1|ABA60830.1| 528|Drosophila melanogaster Iris protein.
Length = 528
Score = 43.2 bits (97), Expect = 3e-04
Identities = 27/105 (25%), Positives = 50/105 (47%)
Frame = +2
Query: 167 ISNVISYFFNDKIMFVLQIPLVEPQEFNVYLCIPLPVPHNATNINSFSTVIPNEKYLVIS 346
+++V+ + + F + +PL++ ++FN+Y P+P +N I T P YL I+
Sbjct: 234 LASVVPRQRGNHVEFQITVPLLDAEKFNIYRLTPIPRLNNG-EIQLVDTETP---YLGIN 289
Query: 347 KDKTRYSNLRSLSQCKSINYVYYICNIVKILSTNANPSCESELVS 481
RY L+SL C + +IC +I+ + S L +
Sbjct: 290 DHMDRYFPLQSLDDCIKLGEERFICRRNRIIYGTGDDSFACSLAA 334
>DQ177368-1|ABA60829.1| 531|Drosophila melanogaster Iris protein.
Length = 531
Score = 43.2 bits (97), Expect = 3e-04
Identities = 27/105 (25%), Positives = 50/105 (47%)
Frame = +2
Query: 167 ISNVISYFFNDKIMFVLQIPLVEPQEFNVYLCIPLPVPHNATNINSFSTVIPNEKYLVIS 346
+++V+ + + F + +PL++ ++FN+Y P+P +N I T P YL I+
Sbjct: 234 LASVVPRQRGNHVEFQITVPLLDAEKFNIYRLTPIPRLNNGV-IQLVDTETP---YLGIN 289
Query: 347 KDKTRYSNLRSLSQCKSINYVYYICNIVKILSTNANPSCESELVS 481
RY L+SL C + +IC +I+ + S L +
Sbjct: 290 DHMDRYFPLQSLDDCIKLGEERFICRRNRIIYGTGDDSFACSLAA 334
>DQ177367-1|ABA60828.1| 528|Drosophila melanogaster Iris protein.
Length = 528
Score = 41.9 bits (94), Expect = 7e-04
Identities = 24/85 (28%), Positives = 43/85 (50%)
Frame = +2
Query: 167 ISNVISYFFNDKIMFVLQIPLVEPQEFNVYLCIPLPVPHNATNINSFSTVIPNEKYLVIS 346
+++V+ + + F + +PL++ ++FN+Y P+P +N I T P YL I+
Sbjct: 234 LASVVPRQRGNHVEFQITVPLLDAEKFNIYRLTPIPRLNNGV-IQLVDTETP---YLGIN 289
Query: 347 KDKTRYSNLRSLSQCKSINYVYYIC 421
RY L+SL C + +IC
Sbjct: 290 DHMDRYFPLQSLDDCIKLGEERFIC 314
>AY061571-1|AAL29119.1| 539|Drosophila melanogaster SD01935p
protein.
Length = 539
Score = 41.9 bits (94), Expect = 7e-04
Identities = 54/196 (27%), Positives = 89/196 (45%)
Frame = +2
Query: 2 DITNSILFSKLNIIHPSILTPSQLHQELVENHRHLPSDLELATSLDLKHIHTLMKISNVI 181
DI SIL +K II P+ + P Q +++ + + L+ + +HI+ L+ I
Sbjct: 207 DIAESILLAKFKII-PNFILPIQELKDIAQIFK-----LQNFSINSEEHIYRLLNIEIES 260
Query: 182 SYFFNDKIMFVLQIPLVEPQEFNVYLCIPLPVPHNATNINSFSTVIPNEKYLVISKDKTR 361
KI+F ++IP+ + + + I LP+ N TN F T+ KY ++ DK
Sbjct: 261 K---KTKIIFHIKIPIFDKYTYTLSHLIKLPI--NGTN---FLTL---PKY-ILYDDKFN 308
Query: 362 YSNLRSLSQCKSINYVYYICNIVKILSTNANPSCESELVSKAITTLPTLCKTKFIHGIID 541
Y L +C I+ YIC+ S N C V + + + +C+ K I+
Sbjct: 309 YM-LSFQEKCSRIHGT-YICDPGTAESNMDNREC----VKQVLQGMNPVCEAKIINTDEA 362
Query: 542 VWEPLNNNKWIFVQSK 589
V EP +WI + SK
Sbjct: 363 VVEP--EQQWIVIISK 376
>DQ177378-1|ABA60839.1| 528|Drosophila melanogaster Iris protein.
Length = 528
Score = 41.1 bits (92), Expect = 0.001
Identities = 26/97 (26%), Positives = 45/97 (46%)
Frame = +2
Query: 149 IHTLMKISNVISYFFNDKIMFVLQIPLVEPQEFNVYLCIPLPVPHNATNINSFSTVIPNE 328
I + ++V+ + + F + +PL++ ++FN+Y P+P +N I T P
Sbjct: 228 IRNIYLFASVVPRQRGNHVEFQITVPLLDAEKFNIYRLTPIPRLNNGV-IQLVDTETP-- 284
Query: 329 KYLVISKDKTRYSNLRSLSQCKSINYVYYICNIVKIL 439
YL I+ RY L SL C + IC +I+
Sbjct: 285 -YLGINDHMDRYFPLHSLDDCIKLGEERLICRRNRII 320
>AY180917-1|AAN87269.1| 2360|Drosophila melanogaster ORF protein.
Length = 2360
Score = 39.9 bits (89), Expect = 0.003
Identities = 30/132 (22%), Positives = 64/132 (48%), Gaps = 5/132 (3%)
Frame = +2
Query: 41 IHPSILTPSQLHQELVENHRHLPSDLEL---ATSLDLKHIHTLMKISNVISYFFNDKIMF 211
++ +IL P+QL +E+ + + L +L + + +LK ++TL+ + F +DK++
Sbjct: 2032 LNTNILRPNQLKKEIAKIQQSLSENLVIPGKRSGTELKEVYTLLTARGL---FIDDKLII 2088
Query: 212 VLQIPLVEPQEFNVYLCIPLPVPHNATNINSFSTVIPNEKYLVISKDKTRYSNL--RSLS 385
++PL ++ IP+P+ N + V +YL+ + + Y + +L+
Sbjct: 2089 SAKVPLFSRHPSKLFRLIPVPI----RNEDRIIMVHTTSEYLIYNFEIDSYHIMTEATLN 2144
Query: 386 QCKSINYVYYIC 421
QC+ IC
Sbjct: 2145 QCQKWQLNKRIC 2156
>AJ000387-1|CAA04048.1| 551|Drosophila melanogaster Envelope
protein protein.
Length = 551
Score = 38.3 bits (85), Expect = 0.008
Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 2/186 (1%)
Frame = +2
Query: 2 DITNSILFSKLNIIHPSILTPSQLHQ--ELVENHRHLPSDLELATSLDLKHIHTLMKISN 175
DI S L +K+N+I IL +++ + ++ + + T +HI+ L+K+ N
Sbjct: 223 DIIESTLLAKINVIPKLILDKTEITKIKQIFKTQNY--------TIKSEQHIYNLLKM-N 273
Query: 176 VISYFFNDKIMFVLQIPLVEPQEFNVYLCIPLPVPHNATNINSFSTVIPNEKYLVISKDK 355
++Y +KI+F ++IP+ + + IPLP INS VI KYL+ +
Sbjct: 274 ALNY--QNKIIFSIKIPIFLSCNYEMARLIPLP-------INSTQFVIA-PKYLIYNNKS 323
Query: 356 TRYSNLRSLSQCKSINYVYYICNIVKILSTNANPSCESELVSKAITTLPTLCKTKFIHGI 535
S ++ +C I ++C I I + N +C L+ + C K
Sbjct: 324 N--SMFSTMYKCPVIE-EQFVCEIDSI-NNLKNNTCLGHLIQNK----TSYCDIKETGLT 375
Query: 536 IDVWEP 553
DV+EP
Sbjct: 376 TDVFEP 381
>AY928610-3|AAX28845.1| 487|Drosophila melanogaster envelope
protein protein.
Length = 487
Score = 35.5 bits (78), Expect = 0.057
Identities = 33/160 (20%), Positives = 76/160 (47%)
Frame = +2
Query: 2 DITNSILFSKLNIIHPSILTPSQLHQELVENHRHLPSDLELATSLDLKHIHTLMKISNVI 181
DIT S+L +K+NII IL ++ + + + LE ++ +K+ ++ +
Sbjct: 161 DITESMLLAKINIIPKFILNEQEMDK--------IKTILE-KQNITVKNEQSIYNFLQMN 211
Query: 182 SYFFNDKIMFVLQIPLVEPQEFNVYLCIPLPVPHNATNINSFSTVIPNEKYLVISKDKTR 361
+ + KI+F +++P+ + + +PLP+ N++ + PN YL + + +
Sbjct: 212 TLNYEQKIIFNIKVPIFKQPFHTLARLVPLPIN------NTYFVITPN--YLAYNINNKK 263
Query: 362 YSNLRSLSQCKSINYVYYICNIVKILSTNANPSCESELVS 481
+ R +C ++ ++C+ + T N +C L++
Sbjct: 264 FHMTR---KCPKLDNT-FLCDENFYVDTPQNNTCLEHLLN 299
>AY061584-1|AAL29132.1| 487|Drosophila melanogaster SD03311p
protein.
Length = 487
Score = 35.5 bits (78), Expect = 0.057
Identities = 33/160 (20%), Positives = 76/160 (47%)
Frame = +2
Query: 2 DITNSILFSKLNIIHPSILTPSQLHQELVENHRHLPSDLELATSLDLKHIHTLMKISNVI 181
DIT S+L +K+NII IL ++ + + + LE ++ +K+ ++ +
Sbjct: 161 DITESMLLAKINIIPKFILNEQEMDK--------IKTILE-KQNITVKNEQSIYNFLQMN 211
Query: 182 SYFFNDKIMFVLQIPLVEPQEFNVYLCIPLPVPHNATNINSFSTVIPNEKYLVISKDKTR 361
+ + KI+F +++P+ + + +PLP+ N++ + PN YL + + +
Sbjct: 212 TLNYEQKIIFNIKVPIFKQPFHTLARLVPLPIN------NTYFVITPN--YLAYNINNKK 263
Query: 362 YSNLRSLSQCKSINYVYYICNIVKILSTNANPSCESELVS 481
+ R +C ++ ++C+ + T N +C L++
Sbjct: 264 FHMTR---KCPKLDNT-FLCDENFYVDTPQNNTCLEHLLN 299
>AJ001516-1|CAC79666.1| 550|Drosophila melanogaster env protein
protein.
Length = 550
Score = 35.5 bits (78), Expect = 0.057
Identities = 33/160 (20%), Positives = 76/160 (47%)
Frame = +2
Query: 2 DITNSILFSKLNIIHPSILTPSQLHQELVENHRHLPSDLELATSLDLKHIHTLMKISNVI 181
DIT S+L +K+NII IL ++ + + + LE ++ +K+ ++ +
Sbjct: 224 DITESMLLAKINIIPKFILNEQEMDK--------IKTILE-KQNITVKNEQSIYNFLQMN 274
Query: 182 SYFFNDKIMFVLQIPLVEPQEFNVYLCIPLPVPHNATNINSFSTVIPNEKYLVISKDKTR 361
+ + KI+F +++P+ + + +PLP+ N++ + PN YL + + +
Sbjct: 275 TLNYEQKIIFNIKVPIFKQPFHTLARLVPLPIN------NTYFVITPN--YLAYNINNKK 326
Query: 362 YSNLRSLSQCKSINYVYYICNIVKILSTNANPSCESELVS 481
+ R +C ++ ++C+ + T N +C L++
Sbjct: 327 FHMTR---KCPKLDNT-FLCDENFYVDTPQNNTCLEHLLN 362
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,983,379
Number of Sequences: 53049
Number of extensions: 524251
Number of successful extensions: 1198
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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