Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc25c19
         (611 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    27   0.12 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    24   0.88 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   0.88 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   2.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.0  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         23   2.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.7  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    21   6.2  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   6.2  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 27.1 bits (57), Expect = 0.12
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = +1

Query: 502 YYCHPTYEVSVYTIWSGQPWNRMFGNLTLI 591
           Y+    Y++  Y  W  + W+    NL L+
Sbjct: 61  YFISNVYQILAYNFWKKKYWSEFLANLKLL 90


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 24.2 bits (50), Expect = 0.88
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 505 YCHPTYEVSVYTIWSGQPWNRMFGNL 582
           YC   Y + V T +  + W R+  NL
Sbjct: 76  YCFNYYVIVVTTFYKRRTWTRLLKNL 101


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.2 bits (50), Expect = 0.88
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 159 TCSCTHPYTDGTCCPYTALCS 221
           TC C + YT   C  Y   CS
Sbjct: 84  TCHCPYGYTGKDCGEYVDWCS 104


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -3

Query: 333 CSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGP 223
           C+  ++ T +SHC+C   +  G    +L+    + GP
Sbjct: 140 CTPNATNTVWSHCQCVLAD--GVERGILTANRMIPGP 174


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -3

Query: 333 CSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGP 223
           C+  ++ T +SHC+C   +  G    +L+    + GP
Sbjct: 140 CTPNATNTVWSHCQCVLAD--GVERGILTANRMIPGP 174


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -2

Query: 424 QTRRNPEWRMRTT 386
           QTRRNP +R RT+
Sbjct: 226 QTRRNPYYRPRTS 238


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 393 EQLLLEGGVPGIAD 352
           EQ+L EGG P + D
Sbjct: 837 EQILAEGGCPNLYD 850


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = +2

Query: 167 LYPPIHRWYLLSLHSSLQCGPSRPHRSLRTLTLLPNSLVLVQRQWE*LVP 316
           L P + R  L  L S L  G   P   +    + PN+++L       LVP
Sbjct: 127 LDPVVKRRLLQHLASCLNQGQKEPQVQVIVPEVAPNNIILGNGTGVQLVP 176


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 165 SCTHPYTDGTCCPYTALCSAVLPDHIGH 248
           SC   ++  T C Y+A  SA    H+ H
Sbjct: 137 SCHQGFSSSTWCNYSAYSSA-SRHHVDH 163


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,851
Number of Sequences: 336
Number of extensions: 3274
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)