Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc25c19
(611 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D86741-2|BAA21841.1| 92|Caenorhabditis elegans ATP synthase su... 77 1e-14
D86740-2|BAA13165.1| 92|Caenorhabditis elegans ATP synthase su... 77 1e-14
AC090999-18|AAK26152.1| 116|Caenorhabditis elegans Hypothetical... 77 1e-14
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 30 1.1
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 30 1.1
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z75531-12|CAA99806.4| 348|Caenorhabditis elegans Hypothetical p... 29 3.5
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 29 3.5
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 3.5
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 3.5
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-... 28 4.6
Z81477-7|CAB03927.2| 326|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z81473-7|CAB60992.2| 661|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z81063-8|CAB61013.2| 661|Caenorhabditis elegans Hypothetical pr... 27 8.0
U53149-1|AAD31546.1| 328|Caenorhabditis elegans Prion-like-(q/n... 27 8.0
AL022288-7|CAA18369.1| 326|Caenorhabditis elegans Hypothetical ... 27 8.0
AF492701-1|AAM49753.1| 647|Caenorhabditis elegans SPE-9 protein. 27 8.0
AF492700-1|AAM49752.1| 647|Caenorhabditis elegans SPE-9 protein. 27 8.0
AF492699-1|AAM49751.1| 647|Caenorhabditis elegans SPE-9 protein. 27 8.0
AF492698-1|AAM49750.1| 647|Caenorhabditis elegans SPE-9 protein. 27 8.0
AF492697-1|AAM49749.1| 647|Caenorhabditis elegans SPE-9 protein. 27 8.0
AF492696-1|AAM49748.1| 647|Caenorhabditis elegans SPE-9 protein. 27 8.0
AF492695-1|AAM49747.1| 647|Caenorhabditis elegans SPE-9 protein. 27 8.0
AF492694-1|AAM49746.1| 647|Caenorhabditis elegans SPE-9 protein. 27 8.0
AF492693-1|AAM49745.1| 647|Caenorhabditis elegans SPE-9 protein. 27 8.0
AF492692-1|AAM49744.1| 647|Caenorhabditis elegans SPE-9 protein. 27 8.0
AF492691-1|AAM49743.1| 647|Caenorhabditis elegans SPE-9 protein. 27 8.0
AF492690-1|AAM49742.1| 647|Caenorhabditis elegans SPE-9 protein. 27 8.0
AF492688-1|AAM49741.1| 647|Caenorhabditis elegans SPE-9 protein. 27 8.0
AF492687-1|AAM49740.1| 647|Caenorhabditis elegans SPE-9 protein. 27 8.0
AF492686-1|AAM49739.1| 647|Caenorhabditis elegans SPE-9 protein. 27 8.0
AF049327-1|AAC38980.1| 661|Caenorhabditis elegans sperm transme... 27 8.0
AC006632-1|AAK85466.1| 311|Caenorhabditis elegans Hypothetical ... 27 8.0
>D86741-2|BAA21841.1| 92|Caenorhabditis elegans ATP synthase
subunit protein.
Length = 92
Score = 76.6 bits (180), Expect = 1e-14
Identities = 40/70 (57%), Positives = 43/70 (61%)
Frame = +1
Query: 217 AVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXXFGSLIIGYARNPSLKQQLFS 396
A R TT KDIDSAAK+ FG+L+IGYARNPSLKQQLFS
Sbjct: 6 AARMISTTVARKDIDSAAKYIGAGAATVGVAGSGAGIGNVFGALVIGYARNPSLKQQLFS 65
Query: 397 YAILGFALSE 426
YAILGFALSE
Sbjct: 66 YAILGFALSE 75
>D86740-2|BAA13165.1| 92|Caenorhabditis elegans ATP synthase
subunit protein.
Length = 92
Score = 76.6 bits (180), Expect = 1e-14
Identities = 40/70 (57%), Positives = 43/70 (61%)
Frame = +1
Query: 217 AVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXXFGSLIIGYARNPSLKQQLFS 396
A R TT KDIDSAAK+ FG+L+IGYARNPSLKQQLFS
Sbjct: 6 AARMISTTVARKDIDSAAKYIGAGAATVGVAGSGAGIGNVFGALVIGYARNPSLKQQLFS 65
Query: 397 YAILGFALSE 426
YAILGFALSE
Sbjct: 66 YAILGFALSE 75
>AC090999-18|AAK26152.1| 116|Caenorhabditis elegans Hypothetical
protein Y82E9BR.3 protein.
Length = 116
Score = 76.6 bits (180), Expect = 1e-14
Identities = 40/70 (57%), Positives = 43/70 (61%)
Frame = +1
Query: 217 AVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXXFGSLIIGYARNPSLKQQLFS 396
A R TT KDIDSAAK+ FG+L+IGYARNPSLKQQLFS
Sbjct: 30 AARMISTTVARKDIDSAAKYIGAGAATVGVAGSGAGIGNVFGALVIGYARNPSLKQQLFS 89
Query: 397 YAILGFALSE 426
YAILGFALSE
Sbjct: 90 YAILGFALSE 99
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 30.3 bits (65), Expect = 1.1
Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
Frame = -3
Query: 363 GIADDEGAEDCSNTSSGTSYSH-CRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYH 187
G D+ + CS S G + S C C + + G GP C E CR RY
Sbjct: 1534 GFQGDKCEQKCSEGSFGPACSQQCNCGKYKCDATDGKCICP-VGRHGPLCEEECRPGRY- 1591
Query: 186 LCMGGYSCKWSHQC 145
G SC+ QC
Sbjct: 1592 ----GQSCQNKCQC 1601
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 30.3 bits (65), Expect = 1.1
Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
Frame = -3
Query: 363 GIADDEGAEDCSNTSSGTSYSH-CRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYH 187
G D+ + CS S G + S C C + + G GP C E CR RY
Sbjct: 1534 GFQGDKCEQKCSEGSFGPACSQQCNCGKYKCDATDGKCICP-VGRHGPLCEEECRPGRY- 1591
Query: 186 LCMGGYSCKWSHQC 145
G SC+ QC
Sbjct: 1592 ----GQSCQNKCQC 1601
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = +3
Query: 114 CSQVCHLLQLCTGATTCSCTHPY-TDGTCC 200
CSQ C C G TTC C Y +G CC
Sbjct: 2148 CSQ-CDANAHCVGGTTCKCNPGYFGNGLCC 2176
>Z75531-12|CAA99806.4| 348|Caenorhabditis elegans Hypothetical
protein C54D10.6 protein.
Length = 348
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 514 PTYEVSVYTIWSGQPWNRMFGNLTLIVMQ 600
P + VSVY I PWN +F ++V Q
Sbjct: 29 PLFLVSVYCILKKSPWNMVFYKWLILVFQ 57
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +3
Query: 114 CSQVCHLLQLCTGATTCSCTHPYTDGTCCPYTALCSAVLPD 236
CS V H + G T C C Y DG +C A+L D
Sbjct: 2755 CSGVAHCIDRAVGYT-CKCPDGYIDGNPDEPGRVCGALLCD 2794
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +3
Query: 114 CSQVCHLLQLCTGATTCSCTHPYTDGTCCPYTALCSAVLPD 236
CS V H + G T C C Y DG +C A+L D
Sbjct: 3339 CSGVAHCIDRAVGYT-CKCPDGYIDGNPDEPGRVCGALLCD 3378
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +3
Query: 114 CSQVCHLLQLCTGATTCSCTHPYTDGTCCPYTALCSAVLPD 236
CS V H + G T C C Y DG +C A+L D
Sbjct: 2755 CSGVAHCIDRAVGYT-CKCPDGYIDGNPDEPGRVCGALLCD 2794
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +3
Query: 114 CSQVCHLLQLCTGATTCSCTHPYTDGTCCPYTALCSAVLPD 236
CS V H + G T C C Y DG +C A+L D
Sbjct: 3339 CSGVAHCIDRAVGYT-CKCPDGYIDGNPDEPGRVCGALLCD 3378
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +3
Query: 114 CSQVCHLLQLCTGATTCSCTHPYTDGTCCPYTALCSAVLPD 236
CS V H + G T C C Y DG +C A+L D
Sbjct: 3339 CSGVAHCIDRAVGYT-CKCPDGYIDGNPDEPGRVCGALLCD 3378
>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform a protein.
Length = 1876
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 11/57 (19%)
Frame = +3
Query: 90 VCRQTDRPC----SQVCHLLQLCTGATTC---SCT----HPYTDGTCCPYTALCSAV 227
+C+Q P C + + CTG TC CT H DG C P A S V
Sbjct: 1426 ICKQKSAPAFAAPGDTCSMREKCTGGATCFEGMCTCDDHHFAEDGYCRPIEARSSKV 1482
>Z81477-7|CAB03927.2| 326|Caenorhabditis elegans Hypothetical
protein C27C7.4 protein.
Length = 326
Score = 27.5 bits (58), Expect = 8.0
Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 6/116 (5%)
Frame = +3
Query: 120 QVCHLLQ---LCTGATTCS-CTHPYTDGTCCPYTALCSAVLPDHIGH*GH*LCCQIHWCW 287
QVCH + L G T+C+ C + Y +C+A I H C +
Sbjct: 16 QVCHSTERTRLYFGITSCAACAAFFRRSDGIRY--MCTATNSCTISHDMKFFCRACRYTS 73
Query: 288 CSDSGSSWFRSWYWNSLRLPHHRLCQEPLPQAAVVLIRHSGFR--LV*GHGSVLSY 449
C +G R+ + + P++ + +EP P++ L GF L +G +L Y
Sbjct: 74 CIRAGMVMSRNALATARKAPNNIIPREPTPRSVPSLEEVDGFSKILNISNGDLLKY 129
>Z81473-7|CAB60992.2| 661|Caenorhabditis elegans Hypothetical
protein C17D12.6 protein.
Length = 661
Score = 27.5 bits (58), Expect = 8.0
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 162 CSCTHPYTDGTCCPY 206
C CT+P TDG C Y
Sbjct: 348 CECTNPLTDGYYCEY 362
>Z81063-8|CAB61013.2| 661|Caenorhabditis elegans Hypothetical
protein C17D12.6 protein.
Length = 661
Score = 27.5 bits (58), Expect = 8.0
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 162 CSCTHPYTDGTCCPY 206
C CT+P TDG C Y
Sbjct: 348 CECTNPLTDGYYCEY 362
>U53149-1|AAD31546.1| 328|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 16
protein.
Length = 328
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = -3
Query: 333 CSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELC 205
C NT TS S+C C + S + L P C++ C
Sbjct: 51 CHNTQQSTSASNCNCVLKSNSKSVPVTIKVSTKLCAPACQQSC 93
>AL022288-7|CAA18369.1| 326|Caenorhabditis elegans Hypothetical
protein ZK1025.10 protein.
Length = 326
Score = 27.5 bits (58), Expect = 8.0
Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 6/116 (5%)
Frame = +3
Query: 120 QVCHLLQ---LCTGATTCS-CTHPYTDGTCCPYTALCSAVLPDHIGH*GH*LCCQIHWCW 287
QVCH + L G T+C+ C + Y +C+A I H C +
Sbjct: 16 QVCHSTERTRLYFGITSCAACAAFFRRSDGIRY--MCTATNSCTISHDMKFFCRACRYTS 73
Query: 288 CSDSGSSWFRSWYWNSLRLPHHRLCQEPLPQAAVVLIRHSGFR--LV*GHGSVLSY 449
C +G R+ + + P++ + +EP P++ L GF L +G +L Y
Sbjct: 74 CIRAGMVMSRNALATARKAPNNIIPREPTPRSVPSLEEVDGFSKILNISNGDLLKY 129
>AF492701-1|AAM49753.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 8.0
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 162 CSCTHPYTDGTCCPY 206
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492700-1|AAM49752.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 8.0
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 162 CSCTHPYTDGTCCPY 206
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492699-1|AAM49751.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 8.0
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 162 CSCTHPYTDGTCCPY 206
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492698-1|AAM49750.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 8.0
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 162 CSCTHPYTDGTCCPY 206
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492697-1|AAM49749.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 8.0
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 162 CSCTHPYTDGTCCPY 206
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492696-1|AAM49748.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 8.0
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 162 CSCTHPYTDGTCCPY 206
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492695-1|AAM49747.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 8.0
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 162 CSCTHPYTDGTCCPY 206
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492694-1|AAM49746.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 8.0
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 162 CSCTHPYTDGTCCPY 206
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492693-1|AAM49745.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 8.0
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 162 CSCTHPYTDGTCCPY 206
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492692-1|AAM49744.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 8.0
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 162 CSCTHPYTDGTCCPY 206
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492691-1|AAM49743.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 8.0
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 162 CSCTHPYTDGTCCPY 206
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492690-1|AAM49742.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 8.0
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 162 CSCTHPYTDGTCCPY 206
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492688-1|AAM49741.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 8.0
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 162 CSCTHPYTDGTCCPY 206
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492687-1|AAM49740.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 8.0
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 162 CSCTHPYTDGTCCPY 206
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492686-1|AAM49739.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 8.0
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 162 CSCTHPYTDGTCCPY 206
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF049327-1|AAC38980.1| 661|Caenorhabditis elegans sperm
transmembrane protein protein.
Length = 661
Score = 27.5 bits (58), Expect = 8.0
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 162 CSCTHPYTDGTCCPY 206
C CT+P TDG C Y
Sbjct: 348 CECTNPLTDGYYCEY 362
>AC006632-1|AAK85466.1| 311|Caenorhabditis elegans Hypothetical
protein F28A10.1 protein.
Length = 311
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -1
Query: 470 KSSRNAIIRQNRPMASDKAKPRMAYENNCCLREGFLA*PMMRE 342
KSSR I ++ + KP E N C+ + FLA PM E
Sbjct: 21 KSSRTLIQPKSSKIQLKSFKPTFFEEWNSCVAQKFLAIPMTAE 63
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,439,721
Number of Sequences: 27780
Number of extensions: 311101
Number of successful extensions: 1265
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1260
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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